Vághy, Mihály A.; Otero-Muras, Irene; Pájaro, Manuel; Szederkényi, Gábor A kinetic finite volume discretization of the multidimensional PIDE model for gene regulatory networks. (English) Zbl 07804877 Bull. Math. Biol. 86, No. 2, Paper No. 22, 26 p. (2024). MSC: 92C42 92C40 45K05 65M08 PDFBibTeX XMLCite \textit{M. A. Vághy} et al., Bull. Math. Biol. 86, No. 2, Paper No. 22, 26 p. (2024; Zbl 07804877) Full Text: DOI OA License
Kiss, Istvan Z.; Berthouze, Luc; KhudaBukhsh, Wasiur R. Towards inferring network properties from epidemic data. (English) Zbl 07786970 Bull. Math. Biol. 86, No. 1, Paper No. 6, 32 p. (2024). MSC: 92D30 92C42 62P10 PDFBibTeX XMLCite \textit{I. Z. Kiss} et al., Bull. Math. Biol. 86, No. 1, Paper No. 6, 32 p. (2024; Zbl 07786970) Full Text: DOI arXiv OA License
Plaugher, Daniel; Murrugarra, David Phenotype control techniques for Boolean gene regulatory networks. (English) Zbl 1522.92024 Bull. Math. Biol. 85, No. 10, Paper No. 89, 36 p. (2023). MSC: 92C40 92C42 92C32 92-02 PDFBibTeX XMLCite \textit{D. Plaugher} and \textit{D. Murrugarra}, Bull. Math. Biol. 85, No. 10, Paper No. 89, 36 p. (2023; Zbl 1522.92024) Full Text: DOI
Anderson, David F.; Howells, Aidan S. Stochastic reaction networks within interacting compartments. (English) Zbl 1521.92054 Bull. Math. Biol. 85, No. 10, Paper No. 87, 39 p. (2023). MSC: 92C42 92C40 60J28 PDFBibTeX XMLCite \textit{D. F. Anderson} and \textit{A. S. Howells}, Bull. Math. Biol. 85, No. 10, Paper No. 87, 39 p. (2023; Zbl 1521.92054) Full Text: DOI arXiv
Eilertsen, Justin; Schnell, Santiago; Walcher, Sebastian Natural parameter conditions for singular perturbations of chemical and biochemical reaction networks. (English) Zbl 1519.92362 Bull. Math. Biol. 85, No. 6, Paper No. 48, 75 p. (2023). Reviewer: Kai Wang (Bengbu) MSC: 92E20 92C40 92C42 92C45 34D15 PDFBibTeX XMLCite \textit{J. Eilertsen} et al., Bull. Math. Biol. 85, No. 6, Paper No. 48, 75 p. (2023; Zbl 1519.92362) Full Text: DOI arXiv
Fritz, Marvin Tumor evolution models of phase-field type with nonlocal effects and angiogenesis. (English) Zbl 1514.92027 Bull. Math. Biol. 85, No. 6, Paper No. 44, 34 p. (2023). MSC: 92C32 35Q92 92C37 92C42 PDFBibTeX XMLCite \textit{M. Fritz}, Bull. Math. Biol. 85, No. 6, Paper No. 44, 34 p. (2023; Zbl 1514.92027) Full Text: DOI arXiv
Campos, Felipe A.; Bruno, Simone; Fu, Yi; Del Vecchio, Domitilla; Williams, Ruth J. Comparison theorems for stochastic chemical reaction networks. (English) Zbl 1512.92025 Bull. Math. Biol. 85, No. 5, Paper No. 39, 41 p. (2023). MSC: 92C40 60J20 92C42 PDFBibTeX XMLCite \textit{F. A. Campos} et al., Bull. Math. Biol. 85, No. 5, Paper No. 39, 41 p. (2023; Zbl 1512.92025) Full Text: DOI arXiv
Deal, Isadora; Macauley, Matthew; Davies, Robin Boolean models of the transport, synthesis, and metabolism of tryptophan in Escherichia coli. (English) Zbl 1507.92034 Bull. Math. Biol. 85, No. 4, Paper No. 29, 34 p. (2023). MSC: 92C42 92C70 PDFBibTeX XMLCite \textit{I. Deal} et al., Bull. Math. Biol. 85, No. 4, Paper No. 29, 34 p. (2023; Zbl 1507.92034) Full Text: DOI arXiv
Kiss, István Z.; Simon, Péter L. On parameter identifiability in network-based epidemic models. (English) Zbl 1508.92266 Bull. Math. Biol. 85, No. 3, Paper No. 18, 17 p. (2023). MSC: 92D30 92C42 PDFBibTeX XMLCite \textit{I. Z. Kiss} and \textit{P. L. Simon}, Bull. Math. Biol. 85, No. 3, Paper No. 18, 17 p. (2023; Zbl 1508.92266) Full Text: DOI arXiv
Wang, Yi; Cao, Jinde; Xue, Changfeng; Li, Li Mathematical analysis of epidemic models with treatment in heterogeneous networks. (English) Zbl 1506.92103 Bull. Math. Biol. 85, No. 2, Paper No. 11, 40 p. (2023). Reviewer: Yilun Shang (Newcastle upon Tyne) MSC: 92D30 92C42 PDFBibTeX XMLCite \textit{Y. Wang} et al., Bull. Math. Biol. 85, No. 2, Paper No. 11, 40 p. (2023; Zbl 1506.92103) Full Text: DOI
Marsh, Lewis; Dufresne, Emilie; Byrne, Helen M.; Harrington, Heather A. Algebra, geometry and topology of ERK kinetics. (English) Zbl 1506.92042 Bull. Math. Biol. 84, No. 12, Paper No. 137, 50 p. (2022). Reviewer: Dieter Erle (Dortmund) MSC: 92C45 92C42 92C37 55N31 92C40 92E20 62G07 37N25 62R40 PDFBibTeX XMLCite \textit{L. Marsh} et al., Bull. Math. Biol. 84, No. 12, Paper No. 137, 50 p. (2022; Zbl 1506.92042) Full Text: DOI arXiv
Lubenia, Patrick Vincent N.; Mendoza, Eduardo R.; Lao, Angelyn R. Reaction network analysis of metabolic insulin signaling. (English) Zbl 1500.92034 Bull. Math. Biol. 84, No. 11, Paper No. 129, 22 p. (2022). MSC: 92C42 92C45 92C40 PDFBibTeX XMLCite \textit{P. V. N. Lubenia} et al., Bull. Math. Biol. 84, No. 11, Paper No. 129, 22 p. (2022; Zbl 1500.92034) Full Text: DOI arXiv
Willson, Stephen J. Distinct-cluster tree-child phylogenetic networks and possible uses to study polyploidy. (English) Zbl 1500.92071 Bull. Math. Biol. 84, No. 11, Paper No. 125, 41 p. (2022). MSC: 92D15 92C42 PDFBibTeX XMLCite \textit{S. J. Willson}, Bull. Math. Biol. 84, No. 11, Paper No. 125, 41 p. (2022; Zbl 1500.92071) Full Text: DOI
Fox, Erika; Cummins, Bree; Duncan, William; Gedeon, Tomáš Modeling transport regulation in gene regulatory networks. (English) Zbl 1497.92099 Bull. Math. Biol. 84, No. 8, Paper No. 89, 42 p. (2022). MSC: 92C42 92C40 PDFBibTeX XMLCite \textit{E. Fox} et al., Bull. Math. Biol. 84, No. 8, Paper No. 89, 42 p. (2022; Zbl 1497.92099) Full Text: DOI
Craciun, Gheorghe; Joshi, Badal; Pantea, Casian; Tan, Ike Multistationarity in cyclic sequestration-transmutation networks. (English) Zbl 1491.92068 Bull. Math. Biol. 84, No. 6, Paper No. 65, 22 p. (2022). MSC: 92C45 92C42 PDFBibTeX XMLCite \textit{G. Craciun} et al., Bull. Math. Biol. 84, No. 6, Paper No. 65, 22 p. (2022; Zbl 1491.92068) Full Text: DOI arXiv
Bortner, Cashous; Meshkat, Nicolette Identifiable paths and cycles in linear compartmental models. (English) Zbl 1486.92064 Bull. Math. Biol. 84, No. 5, Paper No. 53, 43 p. (2022). MSC: 92C42 05C90 PDFBibTeX XMLCite \textit{C. Bortner} and \textit{N. Meshkat}, Bull. Math. Biol. 84, No. 5, Paper No. 53, 43 p. (2022; Zbl 1486.92064) Full Text: DOI arXiv
FitzGerald, Cody; Keener, James P. Bifurcation analysis of a heat-sensitive epigenetic regulatory network. (English) Zbl 1484.92029 Bull. Math. Biol. 84, No. 1, Paper No. 14, 17 p. (2022). MSC: 92C42 92D10 34C23 PDFBibTeX XMLCite \textit{C. FitzGerald} and \textit{J. P. Keener}, Bull. Math. Biol. 84, No. 1, Paper No. 14, 17 p. (2022; Zbl 1484.92029) Full Text: DOI
Willson, Stephen J. Merging arcs to produce acyclic phylogenetic networks and normal networks. (English) Zbl 1481.92094 Bull. Math. Biol. 84, No. 2, Paper No. 26, 38 p. (2022). MSC: 92D15 92C42 PDFBibTeX XMLCite \textit{S. J. Willson}, Bull. Math. Biol. 84, No. 2, Paper No. 26, 38 p. (2022; Zbl 1481.92094) Full Text: DOI
Plaugher, Daniel; Murrugarra, David Modeling the pancreatic cancer microenvironment in search of control targets. (English) Zbl 1475.92052 Bull. Math. Biol. 83, No. 11, Paper No. 115, 26 p. (2021). MSC: 92C32 92C42 94C11 PDFBibTeX XMLCite \textit{D. Plaugher} and \textit{D. Murrugarra}, Bull. Math. Biol. 83, No. 11, Paper No. 115, 26 p. (2021; Zbl 1475.92052) Full Text: DOI Link
Puchhammer, Florian; Ben Abdellah, Amal; L’Ecuyer, Pierre Variance reduction with array-RQMC for tau-leaping simulation of stochastic biological and chemical reaction networks. (English) Zbl 1470.92125 Bull. Math. Biol. 83, No. 8, Paper No. 91, 31 p. (2021). MSC: 92C42 92C40 92E20 60J22 65C05 PDFBibTeX XMLCite \textit{F. Puchhammer} et al., Bull. Math. Biol. 83, No. 8, Paper No. 91, 31 p. (2021; Zbl 1470.92125) Full Text: DOI arXiv Link
Hernandez, Bryan S.; De la Cruz, Ralph John L. Independent decompositions of chemical reaction networks. (English) Zbl 1467.92256 Bull. Math. Biol. 83, No. 7, Paper No. 76, 23 p. (2021). MSC: 92E20 92C40 92C42 92D30 PDFBibTeX XMLCite \textit{B. S. Hernandez} and \textit{R. J. L. De la Cruz}, Bull. Math. Biol. 83, No. 7, Paper No. 76, 23 p. (2021; Zbl 1467.92256) Full Text: DOI arXiv
Fedak, Elizabeth A.; Adler, Frederick R.; Abegglen, Lisa M.; Schiffman, Joshua D. ATM and ATR activation through crosstalk between DNA damage response pathways. (English) Zbl 1460.92066 Bull. Math. Biol. 83, No. 4, Paper No. 38, 30 p. (2021). MSC: 92C37 92C42 92D10 PDFBibTeX XMLCite \textit{E. A. Fedak} et al., Bull. Math. Biol. 83, No. 4, Paper No. 38, 30 p. (2021; Zbl 1460.92066) Full Text: DOI DOI
Ciocanel, Maria-Veronica; Juenemann, Riley; Dawes, Adriana T.; McKinley, Scott A. Topological data analysis approaches to uncovering the timing of ring structure onset in filamentous networks. (English) Zbl 1460.92063 Bull. Math. Biol. 83, No. 3, Paper No. 21, 25 p. (2021). MSC: 92C37 92C42 62P15 62R40 PDFBibTeX XMLCite \textit{M.-V. Ciocanel} et al., Bull. Math. Biol. 83, No. 3, Paper No. 21, 25 p. (2021; Zbl 1460.92063) Full Text: DOI arXiv
Bunimovich, Leonid; Shu, Longmei Local immunodeficiency: role of neutral viruses. (English) Zbl 1453.92069 Bull. Math. Biol. 82, No. 11, Paper No. 140, 19 p. (2020). MSC: 92C32 92C42 PDFBibTeX XMLCite \textit{L. Bunimovich} and \textit{L. Shu}, Bull. Math. Biol. 82, No. 11, Paper No. 140, 19 p. (2020; Zbl 1453.92069) Full Text: DOI arXiv
Müller, Stefan; Joshi, Badal Detailed balance \(=\) complex balance \(+\) cycle balance: a graph-theoretic proof for reaction networks and Markov chains. (English) Zbl 1508.92092 Bull. Math. Biol. 82, No. 9, Paper No. 116, 14 p. (2020). MSC: 92C42 92C40 60J28 05C90 PDFBibTeX XMLCite \textit{S. Müller} and \textit{B. Joshi}, Bull. Math. Biol. 82, No. 9, Paper No. 116, 14 p. (2020; Zbl 1508.92092) Full Text: DOI arXiv
Macauley, Matthew; Youngs, Nora The case for algebraic biology: from research to education. (English) Zbl 1448.92089 Bull. Math. Biol. 82, No. 9, Paper No. 115, 16 p. (2020). MSC: 92C42 92C40 92B15 92D10 92C20 92-02 PDFBibTeX XMLCite \textit{M. Macauley} and \textit{N. Youngs}, Bull. Math. Biol. 82, No. 9, Paper No. 115, 16 p. (2020; Zbl 1448.92089) Full Text: DOI arXiv
Wang, Guiyuan; Yang, Zhuoqin; Turcotte, Marc Dynamic analysis of the time-delayed genetic regulatory network between two auto-regulated and mutually inhibitory genes. (English) Zbl 1437.92053 Bull. Math. Biol. 82, No. 4, Paper No. 46, 30 p. (2020). MSC: 92C42 92D10 34C23 60H30 PDFBibTeX XMLCite \textit{G. Wang} et al., Bull. Math. Biol. 82, No. 4, Paper No. 46, 30 p. (2020; Zbl 1437.92053) Full Text: DOI
Hayes, Sean M.; Anderson, Kurt E. Predicting pattern formation in multilayer networks. (English) Zbl 1432.92037 Bull. Math. Biol. 82, No. 1, Paper No. 4, 16 p. (2020). MSC: 92C42 34C15 PDFBibTeX XMLCite \textit{S. M. Hayes} and \textit{K. E. Anderson}, Bull. Math. Biol. 82, No. 1, Paper No. 4, 16 p. (2020; Zbl 1432.92037) Full Text: DOI Link Link
Sordo Vieira, Luis; Laubenbacher, Reinhard C.; Murrugarra, David Control of intracellular molecular networks using algebraic methods. (English) Zbl 1432.92040 Bull. Math. Biol. 82, No. 1, Paper No. 2, 22 p. (2020). MSC: 92C42 92C37 93B70 93C29 PDFBibTeX XMLCite \textit{L. Sordo Vieira} et al., Bull. Math. Biol. 82, No. 1, Paper No. 2, 22 p. (2020; Zbl 1432.92040) Full Text: DOI DOI Link
Conradi, Carsten; Iosif, Alexandru; Kahle, Thomas Multistationarity in the space of total concentrations for systems that admit a monomial parametrization. (English) Zbl 1427.92039 Bull. Math. Biol. 81, No. 10, 4174-4209 (2019). MSC: 92C42 92C45 13P15 PDFBibTeX XMLCite \textit{C. Conradi} et al., Bull. Math. Biol. 81, No. 10, 4174--4209 (2019; Zbl 1427.92039) Full Text: DOI arXiv
Houston, Matthew T.; Gutierrez, Juan B. The FRiND model: a mathematical model for representing macrophage plasticity in muscular dystrophy pathogenesis. (English) Zbl 1458.92036 Bull. Math. Biol. 81, No. 10, 3976-3997 (2019). Reviewer: Daniela Danciu (Craiova) MSC: 92C42 92C32 34D20 PDFBibTeX XMLCite \textit{M. T. Houston} and \textit{J. B. Gutierrez}, Bull. Math. Biol. 81, No. 10, 3976--3997 (2019; Zbl 1458.92036) Full Text: DOI
Durón, Christina; Pan, Yuan; Gutmann, David H.; Hardin, Johanna; Radunskaya, Ami Variability of betweenness centrality and its effect on identifying essential genes. (English) Zbl 1426.92022 Bull. Math. Biol. 81, No. 9, 3655-3673 (2019). MSC: 92C42 92C40 PDFBibTeX XMLCite \textit{C. Durón} et al., Bull. Math. Biol. 81, No. 9, 3655--3673 (2019; Zbl 1426.92022) Full Text: DOI Link
Gnacadja, Gilles An invitation to pharmacostatics. (English) Zbl 1426.92023 Bull. Math. Biol. 81, No. 9, 3642-3654 (2019). MSC: 92C42 92C40 13P15 PDFBibTeX XMLCite \textit{G. Gnacadja}, Bull. Math. Biol. 81, No. 9, 3642--3654 (2019; Zbl 1426.92023) Full Text: DOI
Mjolsness, Eric Prospects for declarative mathematical modeling of complex biological systems. (English) Zbl 1422.92058 Bull. Math. Biol. 81, No. 8, 3385-3420 (2019). MSC: 92C42 92C15 05C90 92-08 PDFBibTeX XMLCite \textit{E. Mjolsness}, Bull. Math. Biol. 81, No. 8, 3385--3420 (2019; Zbl 1422.92058) Full Text: DOI arXiv
Kang, Hye-Won; Erban, Radek Multiscale stochastic reaction-diffusion algorithms combining Markov chain models with stochastic partial differential equations. (English) Zbl 1422.92055 Bull. Math. Biol. 81, No. 8, 3185-3213 (2019). MSC: 92C42 92C45 60J28 35R60 65C40 92-08 PDFBibTeX XMLCite \textit{H.-W. Kang} and \textit{R. Erban}, Bull. Math. Biol. 81, No. 8, 3185--3213 (2019; Zbl 1422.92055) Full Text: DOI
Maginnis, P. A.; West, M.; Dullerud, G. E. Exact variance-reduced simulation of lattice continuous-time Markov chains with applications in reaction networks. (English) Zbl 1422.92056 Bull. Math. Biol. 81, No. 8, 3159-3184 (2019). MSC: 92C42 92C40 60J28 92-08 PDFBibTeX XMLCite \textit{P. A. Maginnis} et al., Bull. Math. Biol. 81, No. 8, 3159--3184 (2019; Zbl 1422.92056) Full Text: DOI
Gupta, Ankit; Khammash, Mustafa Sensitivity analysis for multiscale stochastic reaction networks using hybrid approximations. (English) Zbl 1422.92054 Bull. Math. Biol. 81, No. 8, 3121-3158 (2019). MSC: 92C42 92C45 35Q92 92C40 60J22 60H35 65C40 PDFBibTeX XMLCite \textit{A. Gupta} and \textit{M. Khammash}, Bull. Math. Biol. 81, No. 8, 3121--3158 (2019; Zbl 1422.92054) Full Text: DOI arXiv
Roh, Min K. Data-driven method for efficient characterization of rare event probabilities in biochemical systems. (English) Zbl 1422.92073 Bull. Math. Biol. 81, No. 8, 3097-3120 (2019). MSC: 92C45 92C42 60H35 92-08 PDFBibTeX XMLCite \textit{M. K. Roh}, Bull. Math. Biol. 81, No. 8, 3097--3120 (2019; Zbl 1422.92073) Full Text: DOI
Lipková, Jana; Arampatzis, Georgios; Chatelain, Philippe; Menze, Bjoern; Koumoutsakos, Petros \(S\)-leaping: an adaptive, accelerated stochastic simulation algorithm, bridging \(\tau\)-leaping and \(R\)-leaping. (English) Zbl 1422.92046 Bull. Math. Biol. 81, No. 8, 3074-3096 (2019). MSC: 92C40 92C42 60H35 92-08 PDFBibTeX XMLCite \textit{J. Lipková} et al., Bull. Math. Biol. 81, No. 8, 3074--3096 (2019; Zbl 1422.92046) Full Text: DOI arXiv
Thanh, Vo Hong A critical comparison of rejection-based algorithms for simulation of large biochemical reaction networks. (English) Zbl 1422.92050 Bull. Math. Biol. 81, No. 8, 3053-3073 (2019). MSC: 92C40 92C42 92-08 PDFBibTeX XMLCite \textit{V. H. Thanh}, Bull. Math. Biol. 81, No. 8, 3053--3073 (2019; Zbl 1422.92050) Full Text: DOI Link
Beentjes, Casper H. L.; Baker, Ruth E. Quasi-Monte Carlo methods applied to tau-leaping in stochastic biological systems. (English) Zbl 1422.92066 Bull. Math. Biol. 81, No. 8, 2931-2959 (2019). MSC: 92C45 92C42 65C05 PDFBibTeX XMLCite \textit{C. H. L. Beentjes} and \textit{R. E. Baker}, Bull. Math. Biol. 81, No. 8, 2931--2959 (2019; Zbl 1422.92066) Full Text: DOI arXiv
Lötstedt, Per The linear noise approximation for spatially dependent biochemical networks. (English) Zbl 1422.92071 Bull. Math. Biol. 81, No. 8, 2873-2901 (2019). MSC: 92C45 92C42 65C40 68Q25 PDFBibTeX XMLCite \textit{P. Lötstedt}, Bull. Math. Biol. 81, No. 8, 2873--2901 (2019; Zbl 1422.92071) Full Text: DOI
Suderman, Ryan; Mitra, Eshan D.; Lin, Yen Ting; Erickson, Keesha E.; Feng, Song; Hlavacek, William S. Generalizing Gillespie’s direct method to enable network-free simulations. (English) Zbl 1422.92062 Bull. Math. Biol. 81, No. 8, 2822-2848 (2019). MSC: 92C42 92C40 92-04 PDFBibTeX XMLCite \textit{R. Suderman} et al., Bull. Math. Biol. 81, No. 8, 2822--2848 (2019; Zbl 1422.92062) Full Text: DOI arXiv Link
Barabanschikov, Alexander; Gunawardena, Jeremy Monostationarity and multistationarity in tree networks of Goldbeter-Koshland loops. (English) Zbl 1417.92053 Bull. Math. Biol. 81, No. 7, 2463-2509 (2019). MSC: 92C42 92C45 PDFBibTeX XMLCite \textit{A. Barabanschikov} and \textit{J. Gunawardena}, Bull. Math. Biol. 81, No. 7, 2463--2509 (2019; Zbl 1417.92053) Full Text: DOI
Sadeghimanesh, AmirHosein; Feliu, Elisenda The multistationarity structure of networks with intermediates and a binomial core network. (English) Zbl 1417.92058 Bull. Math. Biol. 81, No. 7, 2428-2462 (2019). MSC: 92C42 92C40 PDFBibTeX XMLCite \textit{A. Sadeghimanesh} and \textit{E. Feliu}, Bull. Math. Biol. 81, No. 7, 2428--2462 (2019; Zbl 1417.92058) Full Text: DOI arXiv
Jeronimo, Gabriela; Pérez Millán, Mercedes; Solernó, Pablo Identifiability from a few species for a class of biochemical reaction networks. (English) Zbl 1417.92064 Bull. Math. Biol. 81, No. 7, 2133-2175 (2019). MSC: 92C45 92C42 PDFBibTeX XMLCite \textit{G. Jeronimo} et al., Bull. Math. Biol. 81, No. 7, 2133--2175 (2019; Zbl 1417.92064) Full Text: DOI arXiv
Johnston, Matthew D.; Burton, Evan Computing weakly reversible deficiency zero network translations using elementary flux modes. (English) Zbl 1415.92085 Bull. Math. Biol. 81, No. 5, 1613-1644 (2019). MSC: 92C42 92C45 90C10 PDFBibTeX XMLCite \textit{M. D. Johnston} and \textit{E. Burton}, Bull. Math. Biol. 81, No. 5, 1613--1644 (2019; Zbl 1415.92085) Full Text: DOI arXiv
Dickenstein, Alicia; Millán, Mercedes Pérez; Shiu, Anne; Tang, Xiaoxian Multistationarity in structured reaction networks. (English) Zbl 1415.92083 Bull. Math. Biol. 81, No. 5, 1527-1581 (2019). MSC: 92C42 92C45 PDFBibTeX XMLCite \textit{A. Dickenstein} et al., Bull. Math. Biol. 81, No. 5, 1527--1581 (2019; Zbl 1415.92083) Full Text: DOI arXiv Link
Mortveit, Henning S.; Pederson, Ryan D. Attractor stability in finite asynchronous biological system models. (English) Zbl 1415.92087 Bull. Math. Biol. 81, No. 5, 1442-1460 (2019). MSC: 92C42 34D45 92-04 PDFBibTeX XMLCite \textit{H. S. Mortveit} and \textit{R. D. Pederson}, Bull. Math. Biol. 81, No. 5, 1442--1460 (2019; Zbl 1415.92087) Full Text: DOI
Kang, Hye-Won; KhudaBukhsh, Wasiur R.; Koeppl, Heinz; Rempała, Grzegorz A. Quasi-steady-state approximations derived from the stochastic model of enzyme kinetics. (English) Zbl 1415.92093 Bull. Math. Biol. 81, No. 5, 1303-1336 (2019). MSC: 92C45 92C42 60J28 PDFBibTeX XMLCite \textit{H.-W. Kang} et al., Bull. Math. Biol. 81, No. 5, 1303--1336 (2019; Zbl 1415.92093) Full Text: DOI arXiv
Enciso, German; Kim, Jinsu Embracing noise in chemical reaction networks. (English) Zbl 1415.92084 Bull. Math. Biol. 81, No. 5, 1261-1267 (2019). MSC: 92C42 92C40 PDFBibTeX XMLCite \textit{G. Enciso} and \textit{J. Kim}, Bull. Math. Biol. 81, No. 5, 1261--1267 (2019; Zbl 1415.92084) Full Text: DOI
Johnston, Matthew D.; Müller, Stefan; Pantea, Casian A deficiency-based approach to parametrizing positive equilibria of biochemical reaction systems. (English) Zbl 1415.92086 Bull. Math. Biol. 81, No. 4, 1143-1172 (2019). MSC: 92C42 92C40 PDFBibTeX XMLCite \textit{M. D. Johnston} et al., Bull. Math. Biol. 81, No. 4, 1143--1172 (2019; Zbl 1415.92086) Full Text: DOI arXiv
Bressloff, P. C.; Levien, E. Propagation of extrinsic fluctuations in biochemical birth-death processes. (English) Zbl 1415.92079 Bull. Math. Biol. 81, No. 3, 800-829 (2019). MSC: 92C40 92C42 60J85 PDFBibTeX XMLCite \textit{P. C. Bressloff} and \textit{E. Levien}, Bull. Math. Biol. 81, No. 3, 800--829 (2019; Zbl 1415.92079) Full Text: DOI
Haspolat, E.; Huard, B.; Angelova, M. Deterministic and stochastic models of Arabidopsis thaliana flowering. (English) Zbl 1409.92159 Bull. Math. Biol. 81, No. 1, 277-311 (2019). MSC: 92C80 92C42 92D10 PDFBibTeX XMLCite \textit{E. Haspolat} et al., Bull. Math. Biol. 81, No. 1, 277--311 (2019; Zbl 1409.92159) Full Text: DOI
Latif, Majid jun.; May, Elebeoba E. A multiscale agent-based model for the investigation of E. coli K12 metabolic response during biofilm formation. (English) Zbl 1401.92079 Bull. Math. Biol. 80, No. 11, 2917-2956 (2018). MSC: 92C40 92C17 92C45 92C42 PDFBibTeX XMLCite \textit{M. Latif jun.} and \textit{E. E. May}, Bull. Math. Biol. 80, No. 11, 2917--2956 (2018; Zbl 1401.92079) Full Text: DOI
Tonello, Elisa; Johnston, Matthew D. Network translation and steady-state properties of chemical reaction systems. (English) Zbl 1400.92217 Bull. Math. Biol. 80, No. 9, 2306-2337 (2018). MSC: 92C42 92C45 90C35 PDFBibTeX XMLCite \textit{E. Tonello} and \textit{M. D. Johnston}, Bull. Math. Biol. 80, No. 9, 2306--2337 (2018; Zbl 1400.92217) Full Text: DOI arXiv
Huang, Bin; Zhong, Ning; Xia, Lili; Yu, Guiping; Cao, Hongbao Sparse representation-based patient-specific diagnosis and treatment for esophageal squamous cell carcinoma. (English) Zbl 1398.92118 Bull. Math. Biol. 80, No. 8, 2124-2136 (2018). MSC: 92C50 92D10 92C42 PDFBibTeX XMLCite \textit{B. Huang} et al., Bull. Math. Biol. 80, No. 8, 2124--2136 (2018; Zbl 1398.92118) Full Text: DOI
O’Regan, Suzanne M.; Burton, Danielle L. How stochasticity influences leading indicators of critical transitions. (English) Zbl 1396.92027 Bull. Math. Biol. 80, No. 6, 1630-1654 (2018). MSC: 92C42 34C23 60H30 PDFBibTeX XMLCite \textit{S. M. O'Regan} and \textit{D. L. Burton}, Bull. Math. Biol. 80, No. 6, 1630--1654 (2018; Zbl 1396.92027) Full Text: DOI
Szymańska, Zuzanna; Cytowski, Maciej; Mitchell, Elaine; Macnamara, Cicely K.; Chaplain, Mark A. J. Computational modelling of cancer development and growth: modelling at multiple scales and multiscale modelling. (English) Zbl 1394.92065 Bull. Math. Biol. 80, No. 5, 1366-1403 (2018). MSC: 92C50 92C37 35Q92 92C42 PDFBibTeX XMLCite \textit{Z. Szymańska} et al., Bull. Math. Biol. 80, No. 5, 1366--1403 (2018; Zbl 1394.92065) Full Text: DOI Link
Komarova, Natalia L.; van den Driessche, P. Stability of control networks in autonomous homeostatic regulation of stem cell lineages. (English) Zbl 1394.92050 Bull. Math. Biol. 80, No. 5, 1345-1365 (2018). MSC: 92C42 92C30 PDFBibTeX XMLCite \textit{N. L. Komarova} and \textit{P. van den Driessche}, Bull. Math. Biol. 80, No. 5, 1345--1365 (2018; Zbl 1394.92050) Full Text: DOI Link
Wynn, Michelle L.; Egbert, Megan; Consul, Nikita; Chang, Jungsoo; Wu, Zhi-Fen; Meravjer, Sofia D.; Schnell, Santiago Inferring intracellular signal transduction circuitry from molecular perturbation experiments. (English) Zbl 1394.92034 Bull. Math. Biol. 80, No. 5, 1310-1344 (2018). MSC: 92C37 92C40 92C42 PDFBibTeX XMLCite \textit{M. L. Wynn} et al., Bull. Math. Biol. 80, No. 5, 1310--1344 (2018; Zbl 1394.92034) Full Text: DOI Link
Meinecke, Lina Multiscale modeling of diffusion in a crowded environment. (English) Zbl 1382.92145 Bull. Math. Biol. 79, No. 11, 2672-2695 (2017). MSC: 92C42 92C37 60J70 PDFBibTeX XMLCite \textit{L. Meinecke}, Bull. Math. Biol. 79, No. 11, 2672--2695 (2017; Zbl 1382.92145) Full Text: DOI arXiv Link
Fan, Gaoyang; Bressloff, Paul C. Population model of quorum sensing with multiple parallel pathways. (English) Zbl 1382.92125 Bull. Math. Biol. 79, No. 11, 2599-2626 (2017). MSC: 92C40 92C42 PDFBibTeX XMLCite \textit{G. Fan} and \textit{P. C. Bressloff}, Bull. Math. Biol. 79, No. 11, 2599--2626 (2017; Zbl 1382.92125) Full Text: DOI
Reed, Michael; Best, Janet; Golubitsky, Martin; Stewart, Ian; Nijhout, H. Frederik Analysis of homeostatic mechanisms in biochemical networks. (English) Zbl 1382.92131 Bull. Math. Biol. 79, No. 11, 2534-2557 (2017). MSC: 92C40 92C42 PDFBibTeX XMLCite \textit{M. Reed} et al., Bull. Math. Biol. 79, No. 11, 2534--2557 (2017; Zbl 1382.92131) Full Text: DOI Link
Shafaghati, Leila; Razaghi-Moghadam, Zahra; Mohammadnejad, Javad A systems biology approach to understanding alcoholic liver disease molecular mechanism: the development of static and dynamic models. (English) Zbl 1382.92168 Bull. Math. Biol. 79, No. 11, 2450-2473 (2017). MSC: 92C50 92C40 92C42 PDFBibTeX XMLCite \textit{L. Shafaghati} et al., Bull. Math. Biol. 79, No. 11, 2450--2473 (2017; Zbl 1382.92168) Full Text: DOI
Jenkins, Andy; Macauley, Matthew Bistability and asynchrony in a Boolean model of the L-arabinose operon in Escherichia coli. (English) Zbl 1373.92048 Bull. Math. Biol. 79, No. 8, 1778-1795 (2017). MSC: 92C40 92C42 92-08 PDFBibTeX XMLCite \textit{A. Jenkins} and \textit{M. Macauley}, Bull. Math. Biol. 79, No. 8, 1778--1795 (2017; Zbl 1373.92048) Full Text: DOI arXiv
Karst, Nathaniel J.; Geddes, John B.; Carr, Russell T. Model microvascular networks can have many equilibria. (English) Zbl 1373.92056 Bull. Math. Biol. 79, No. 3, 662-681 (2017). MSC: 92C42 92C35 PDFBibTeX XMLCite \textit{N. J. Karst} et al., Bull. Math. Biol. 79, No. 3, 662--681 (2017; Zbl 1373.92056) Full Text: DOI
Matache, Mihaela T.; Matache, Valentin Logical reduction of biological networks to their most determinative components. (English) Zbl 1361.92029 Bull. Math. Biol. 78, No. 7, 1520-1545 (2016). MSC: 92C42 94C10 PDFBibTeX XMLCite \textit{M. T. Matache} and \textit{V. Matache}, Bull. Math. Biol. 78, No. 7, 1520--1545 (2016; Zbl 1361.92029) Full Text: DOI Link
Lester, Christopher; Baker, Ruth E.; Giles, Michael B.; Yates, Christian A. Extending the multi-level method for the simulation of stochastic biological systems. (English) Zbl 1352.92062 Bull. Math. Biol. 78, No. 8, 1640-1677 (2016). MSC: 92C42 92C40 65C20 60H35 PDFBibTeX XMLCite \textit{C. Lester} et al., Bull. Math. Biol. 78, No. 8, 1640--1677 (2016; Zbl 1352.92062) Full Text: DOI arXiv
Fan, Gaoyang; Cummins, Bree; Gedeon, Tomáš Convergence properties of posttranslationally modified protein-protein switching networks with fast decay rates. (English) Zbl 1348.92056 Bull. Math. Biol. 78, No. 6, 1077-1120 (2016). MSC: 92C40 92C42 PDFBibTeX XMLCite \textit{G. Fan} et al., Bull. Math. Biol. 78, No. 6, 1077--1120 (2016; Zbl 1348.92056) Full Text: DOI
Martini, Johannes W. R.; Schlather, Martin; Schütz, Stefan A model for carrier-mediated biological signal transduction based on equilibrium ligand binding theory. (English) Zbl 1348.92060 Bull. Math. Biol. 78, No. 5, 1039-1057 (2016). MSC: 92C40 92C42 PDFBibTeX XMLCite \textit{J. W. R. Martini} et al., Bull. Math. Biol. 78, No. 5, 1039--1057 (2016; Zbl 1348.92060) Full Text: DOI
Mellor, Nathan; Bennett, Malcolm J.; King, John R. GH3-mediated auxin conjugation can result in either transient or oscillatory transcriptional auxin responses. (English) Zbl 1356.92034 Bull. Math. Biol. 78, No. 2, 210-234 (2016). MSC: 92C40 92C42 PDFBibTeX XMLCite \textit{N. Mellor} et al., Bull. Math. Biol. 78, No. 2, 210--234 (2016; Zbl 1356.92034) Full Text: DOI
Dahlquist, Kam D.; Fitzpatrick, Ben G.; Camacho, Erika T.; Entzminger, Stephanie D.; Wanner, Nathan C. Parameter estimation for gene regulatory networks from microarray data: cold shock response in Saccharomyces cerevisiae. (English) Zbl 1336.92026 Bull. Math. Biol. 77, No. 8, 1457-1492 (2015). MSC: 92C40 92C42 92D10 PDFBibTeX XMLCite \textit{K. D. Dahlquist} et al., Bull. Math. Biol. 77, No. 8, 1457--1492 (2015; Zbl 1336.92026) Full Text: DOI
Edwards, R.; Machina, Anna; McGregor, Geoffrey; van den Driessche, P. A modelling framework for gene regulatory networks including transcription and translation. (English) Zbl 1335.92031 Bull. Math. Biol. 77, No. 6, 953-983 (2015). MSC: 92C42 34A36 92C40 PDFBibTeX XMLCite \textit{R. Edwards} et al., Bull. Math. Biol. 77, No. 6, 953--983 (2015; Zbl 1335.92031) Full Text: DOI
Tyson, John J.; Novak, Bela Bistability, oscillations, and traveling waves in frog egg extracts. (English) Zbl 1334.92184 Bull. Math. Biol. 77, No. 5, 796-816 (2015). MSC: 92C45 92C42 35C07 PDFBibTeX XMLCite \textit{J. J. Tyson} and \textit{B. Novak}, Bull. Math. Biol. 77, No. 5, 796--816 (2015; Zbl 1334.92184) Full Text: DOI Link
Plank, Michael J.; Law, Richard Spatial point processes and moment dynamics in the life sciences: a parsimonious derivation and some extensions. (English) Zbl 1334.92161 Bull. Math. Biol. 77, No. 4, 586-613 (2015). MSC: 92C42 92C40 PDFBibTeX XMLCite \textit{M. J. Plank} and \textit{R. Law}, Bull. Math. Biol. 77, No. 4, 586--613 (2015; Zbl 1334.92161) Full Text: DOI Link
Conradi, Carsten; Shiu, Anne A global convergence result for processive multisite phosphorylation systems. (English) Zbl 1334.92169 Bull. Math. Biol. 77, No. 1, 126-155 (2015). MSC: 92C45 92C42 PDFBibTeX XMLCite \textit{C. Conradi} and \textit{A. Shiu}, Bull. Math. Biol. 77, No. 1, 126--155 (2015; Zbl 1334.92169) Full Text: DOI arXiv
Blanchini, Franco; Franco, Elisa; Giordano, Giulia A structural classification of candidate oscillatory and multistationary biochemical systems. (English) Zbl 1329.92041 Bull. Math. Biol. 76, No. 10, 2542-2569 (2014). MSC: 92C40 92C42 PDFBibTeX XMLCite \textit{F. Blanchini} et al., Bull. Math. Biol. 76, No. 10, 2542--2569 (2014; Zbl 1329.92041) Full Text: DOI DOI
Terry, Alan J. A minimal spatio-temporal model of the NF-\(\kappa \)B signalling pathway exhibits a range of behaviours. (English) Zbl 1330.92042 Bull. Math. Biol. 76, No. 10, 2363-2388 (2014). MSC: 92C37 92C40 92C42 PDFBibTeX XMLCite \textit{A. J. Terry}, Bull. Math. Biol. 76, No. 10, 2363--2388 (2014; Zbl 1330.92042) Full Text: DOI
Uecker, Hannes; Müller, Johannes; Hense, Burkhard A. Individual-based model for quorum sensing with background flow. (English) Zbl 1300.92037 Bull. Math. Biol. 76, No. 7, 1727-1746 (2014). MSC: 92C42 PDFBibTeX XMLCite \textit{H. Uecker} et al., Bull. Math. Biol. 76, No. 7, 1727--1746 (2014; Zbl 1300.92037) Full Text: DOI
Tonnelier, Arnaud Cyclic negative feedback systems: what is the chance of oscillation? (English) Zbl 1297.92035 Bull. Math. Biol. 76, No. 5, 1155-1193 (2014). MSC: 92C42 92B05 PDFBibTeX XMLCite \textit{A. Tonnelier}, Bull. Math. Biol. 76, No. 5, 1155--1193 (2014; Zbl 1297.92035) Full Text: DOI HAL
McKane, Alan J.; Biancalani, Tommaso; Rogers, Tim Stochastic pattern formation and spontaneous polarisation: the linear noise approximation and beyond. (English) Zbl 1297.92034 Bull. Math. Biol. 76, No. 4, 895-921 (2014). MSC: 92C42 PDFBibTeX XMLCite \textit{A. J. McKane} et al., Bull. Math. Biol. 76, No. 4, 895--921 (2014; Zbl 1297.92034) Full Text: DOI arXiv Link
Hu, Jifeng; Kang, Hye-Won; Othmer, Hans G. Stochastic analysis of reaction-diffusion processes. (English) Zbl 1297.92036 Bull. Math. Biol. 76, No. 4, 854-894 (2014). MSC: 92C45 92C42 58J65 PDFBibTeX XMLCite \textit{J. Hu} et al., Bull. Math. Biol. 76, No. 4, 854--894 (2014; Zbl 1297.92036) Full Text: DOI
Wang, Siyang; Elf, Johan; Hellander, Stefan; Lötstedt, Per Stochastic reaction-diffusion processes with embedded lower-dimensional structures. (English) Zbl 1297.92037 Bull. Math. Biol. 76, No. 4, 819-853 (2014). MSC: 92C45 92C42 PDFBibTeX XMLCite \textit{S. Wang} et al., Bull. Math. Biol. 76, No. 4, 819--853 (2014; Zbl 1297.92037) Full Text: DOI
Erban, Radek; Flegg, Mark B.; Papoian, Garegin A. Multiscale stochastic reaction-diffusion modeling: application to actin dynamics in filopodia. (English) Zbl 1297.92033 Bull. Math. Biol. 76, No. 4, 799-818 (2014). MSC: 92C42 58J65 PDFBibTeX XMLCite \textit{R. Erban} et al., Bull. Math. Biol. 76, No. 4, 799--818 (2014; Zbl 1297.92033) Full Text: DOI
Merkey, Brian V.; Chopp, David L. Modeling the impact of interspecies competition on performance of a microbial fuel cell. (English) Zbl 1298.92042 Bull. Math. Biol. 76, No. 6, 1429-1453 (2014). MSC: 92C42 PDFBibTeX XMLCite \textit{B. V. Merkey} and \textit{D. L. Chopp}, Bull. Math. Biol. 76, No. 6, 1429--1453 (2014; Zbl 1298.92042) Full Text: DOI
Sriyudthsak, Kansuporn; Iwata, Michio; Hirai, Masami Yokota; Shiraishi, Fumihide PENDISC: a simple method for constructing a mathematical model from time-series data of metabolite concentrations. (English) Zbl 1298.92044 Bull. Math. Biol. 76, No. 6, 1333-1351 (2014). MSC: 92C45 92C42 PDFBibTeX XMLCite \textit{K. Sriyudthsak} et al., Bull. Math. Biol. 76, No. 6, 1333--1351 (2014; Zbl 1298.92044) Full Text: DOI
Holmes, William R. An efficient, nonlinear stability analysis for detecting pattern formation in reaction diffusion systems. (English) Zbl 1283.92011 Bull. Math. Biol. 76, No. 1, 157-183 (2014). MSC: 92C15 35K57 35B35 35Q92 92C42 PDFBibTeX XMLCite \textit{W. R. Holmes}, Bull. Math. Biol. 76, No. 1, 157--183 (2014; Zbl 1283.92011) Full Text: DOI arXiv Link
Innocentini, Guilherme Da Costa Pereira; Forger, Michael; Ramos, Alexandre Ferreira; Radulescu, Ovidiu; Hornos, José Eduardo Martinho Multimodality and flexibility of stochastic gene expression. (English) Zbl 1285.92007 Bull. Math. Biol. 75, No. 12, 2600-2630 (2013). MSC: 92C40 92C42 PDFBibTeX XMLCite \textit{G. Da C. P. Innocentini} et al., Bull. Math. Biol. 75, No. 12, 2600--2630 (2013; Zbl 1285.92007) Full Text: DOI
Pohlmeyer, J. V.; Cummings, L. J. Cyclic loading of growing tissue in a bioreactor: mathematical model and asymptotic analysis. (English) Zbl 1284.92035 Bull. Math. Biol. 75, No. 12, 2450-2473 (2013). MSC: 92C42 92C37 92-08 PDFBibTeX XMLCite \textit{J. V. Pohlmeyer} and \textit{L. J. Cummings}, Bull. Math. Biol. 75, No. 12, 2450--2473 (2013; Zbl 1284.92035) Full Text: DOI
Vey, Gregory Gene coexpression as Hebbian learning in prokaryotic genomes. (English) Zbl 1284.92036 Bull. Math. Biol. 75, No. 12, 2431-2449 (2013). MSC: 92C42 68T05 92B20 92-08 PDFBibTeX XMLCite \textit{G. Vey}, Bull. Math. Biol. 75, No. 12, 2431--2449 (2013; Zbl 1284.92036) Full Text: DOI
Clote, Peter; Kranakis, Evangelos; Krizanc, Danny Asymptotic number of hairpins of saturated RNA secondary structures. (English) Zbl 1284.92026 Bull. Math. Biol. 75, No. 12, 2410-2430 (2013). MSC: 92C40 92C42 PDFBibTeX XMLCite \textit{P. Clote} et al., Bull. Math. Biol. 75, No. 12, 2410--2430 (2013; Zbl 1284.92026) Full Text: DOI
McQuaid, C. Finn; Britton, Nicholas F. Network dynamics contribute to structure: nestedness in mutualistic networks. (English) Zbl 1284.92034 Bull. Math. Biol. 75, No. 12, 2372-2388 (2013). MSC: 92C42 92D40 92D15 PDFBibTeX XMLCite \textit{C. F. McQuaid} and \textit{N. F. Britton}, Bull. Math. Biol. 75, No. 12, 2372--2388 (2013; Zbl 1284.92034) Full Text: DOI
Mirzaev, Inomzhon; Gunawardena, Jeremy Laplacian dynamics on general graphs. (English) Zbl 1310.92023 Bull. Math. Biol. 75, No. 11, 2118-2149 (2013). MSC: 92C40 92C42 05C50 05C90 PDFBibTeX XMLCite \textit{I. Mirzaev} and \textit{J. Gunawardena}, Bull. Math. Biol. 75, No. 11, 2118--2149 (2013; Zbl 1310.92023) Full Text: DOI
Holstein, Katharina; Flockerzi, Dietrich; Conradi, Carsten Multistationarity in sequential distributed multisite phosphorylation networks. (English) Zbl 1283.92030 Bull. Math. Biol. 75, No. 11, 2028-2058 (2013). MSC: 92C40 92C42 PDFBibTeX XMLCite \textit{K. Holstein} et al., Bull. Math. Biol. 75, No. 11, 2028--2058 (2013; Zbl 1283.92030) Full Text: DOI arXiv
Willson, Stephen J. Reconstruction of certain phylogenetic networks from their tree-average distances. (English) Zbl 1275.92084 Bull. Math. Biol. 75, No. 10, 1840-1878 (2013). MSC: 92D15 92C42 05C05 05C90 PDFBibTeX XMLCite \textit{S. J. Willson}, Bull. Math. Biol. 75, No. 10, 1840--1878 (2013; Zbl 1275.92084) Full Text: DOI
Clarke, James; White, K. A. Jane; Turner, Katy Approximating optimal controls for networks when there are combinations of population-level and targeted measures available: chlamydia infection as a case-study. (English) Zbl 1275.92091 Bull. Math. Biol. 75, No. 10, 1747-1777 (2013). MSC: 92D30 92C42 49N90 92-08 PDFBibTeX XMLCite \textit{J. Clarke} et al., Bull. Math. Biol. 75, No. 10, 1747--1777 (2013; Zbl 1275.92091) Full Text: DOI
Bodaker, Matan; Louzoun, Yoram; Mitrani, Eduardo Mathematical conditions for induced cell differentiation and trans-differentiation in adult cells. (English) Zbl 1273.92019 Bull. Math. Biol. 75, No. 5, 819-844 (2013). MSC: 92C37 92C42 92-08 PDFBibTeX XMLCite \textit{M. Bodaker} et al., Bull. Math. Biol. 75, No. 5, 819--844 (2013; Zbl 1273.92019) Full Text: DOI
Tawfik, Yasmine; Owens, Robert G. A mathematical and numerical investigation of the hemodynamical origins of oscillations in microvascular networks. (English) Zbl 1310.92027 Bull. Math. Biol. 75, No. 4, 676-707 (2013). MSC: 92C42 92B25 34K60 PDFBibTeX XMLCite \textit{Y. Tawfik} and \textit{R. G. Owens}, Bull. Math. Biol. 75, No. 4, 676--707 (2013; Zbl 1310.92027) Full Text: DOI
Rattana, Prapanporn; Blyuss, Konstantin B.; Eames, Ken T. D.; Kiss, Istvan Z. A class of pairwise models for epidemic dynamics on weighted networks. (English) Zbl 1273.92057 Bull. Math. Biol. 75, No. 3, 466-490 (2013). MSC: 92D30 92C42 92-08 PDFBibTeX XMLCite \textit{P. Rattana} et al., Bull. Math. Biol. 75, No. 3, 466--490 (2013; Zbl 1273.92057) Full Text: DOI arXiv Link