Giancarlo, Raffaele; Manzini, Giovanni; Restivo, Antonio; Rosone, Giovanna; Sciortino, Marinella A new class of string transformations for compressed text indexing. (English) Zbl 07742406 Inf. Comput. 294, Article ID 105068, 16 p. (2023). MSC: 68Qxx PDFBibTeX XMLCite \textit{R. Giancarlo} et al., Inf. Comput. 294, Article ID 105068, 16 p. (2023; Zbl 07742406) Full Text: DOI arXiv
Giancarlo, Raffaele; Manzini, Giovanni; Restivo, Antonio; Rosone, Giovanna; Sciortino, Marinella The alternating BWT: an algorithmic perspective. (English) Zbl 1435.68087 Theor. Comput. Sci. 812, 230-243 (2020). MSC: 68P30 68R15 68W32 PDFBibTeX XMLCite \textit{R. Giancarlo} et al., Theor. Comput. Sci. 812, 230--243 (2020; Zbl 1435.68087) Full Text: DOI arXiv
Giancarlo, Raffaele; Manzini, Giovanni; Rosone, Giovanna; Sciortino, Marinella A new class of searchable and provably highly compressible string transformations. (English) Zbl 07559180 Pisanti, Nadia (ed.) et al., 30th annual symposium on combinatorial pattern matching, CPM 2019, Pisa, Italy, June 18–20, 2019. Proceedings. Wadern: Schloss Dagstuhl – Leibniz-Zentrum für Informatik. LIPIcs – Leibniz Int. Proc. Inform. 128, Article 12, 12 p. (2019). MSC: 68P30 68R15 68W32 PDFBibTeX XMLCite \textit{R. Giancarlo} et al., LIPIcs -- Leibniz Int. Proc. Inform. 128, Article 12, 12 p. (2019; Zbl 07559180) Full Text: DOI arXiv
Giancarlo, Raffaele; Rombo, Simona E.; Utro, Filippo DNA combinatorial messages and epigenomics: the case of chromatin organization and nucleosome occupancy in eukaryotic genomes. (English) Zbl 1432.92062 Theor. Comput. Sci. 792, 117-130 (2019). MSC: 92D10 92-08 PDFBibTeX XMLCite \textit{R. Giancarlo} et al., Theor. Comput. Sci. 792, 117--130 (2019; Zbl 1432.92062) Full Text: DOI Link
Giancarlo, R.; Scaturro, D.; Utro, F. Textual data compression in computational biology: algorithmic techniques. (English) Zbl 1298.68087 Comput. Sci. Rev. 6, No. 1, 1-25 (2012). MSC: 68P30 68P15 68T10 68T05 68Q30 92D20 68-02 92-08 PDFBibTeX XMLCite \textit{R. Giancarlo} et al., Comput. Sci. Rev. 6, No. 1, 1--25 (2012; Zbl 1298.68087) Full Text: DOI
Giancarlo, Raffaele; Grossi, Roberto Parallel construction and query of index data structures for pattern matching on square matrices. (English) Zbl 0921.68048 J. Complexity 15, No. 1, 30-71 (1999). MSC: 68W15 PDFBibTeX XMLCite \textit{R. Giancarlo} and \textit{R. Grossi}, J. Complexity 15, No. 1, 30--71 (1999; Zbl 0921.68048) Full Text: DOI Link