Ciobanu, Gabriel; Todoran, Eneia Nicolae A process calculus for spiking neural P systems. (English) Zbl 07814668 Inf. Sci. 604, 298-319 (2022). MSC: 68-XX 92-XX PDFBibTeX XMLCite \textit{G. Ciobanu} and \textit{E. N. Todoran}, Inf. Sci. 604, 298--319 (2022; Zbl 07814668) Full Text: DOI
Dong, Jianping; Zhang, Gexiang; Luo, Biao; Yang, Qiang; Guo, Dequan; Rong, Haina; Zhu, Ming; Zhou, Kang A distributed adaptive optimization spiking neural P system for approximately solving combinatorial optimization problems. (English) Zbl 07810757 Inf. Sci. 596, 1-14 (2022). MSC: 90Cxx 92-XX PDFBibTeX XMLCite \textit{J. Dong} et al., Inf. Sci. 596, 1--14 (2022; Zbl 07810757) Full Text: DOI
Macababayao, Ivan Cedric H.; Cabarle, Francis George C.; de la Cruz, Ren Tristan A.; Zeng, Xiangxiang Normal forms for spiking neural P systems and some of its variants. (English) Zbl 07810537 Inf. Sci. 595, 344-363 (2022). MSC: 68-XX 92-XX PDFBibTeX XMLCite \textit{I. C. H. Macababayao} et al., Inf. Sci. 595, 344--363 (2022; Zbl 07810537) Full Text: DOI
Aman, Bogdan; Ciobanu, Gabriel The power of synchronizing rules in membrane computing. (English) Zbl 07810514 Inf. Sci. 594, 360-370 (2022). MSC: 68-XX 92-XX PDFBibTeX XMLCite \textit{B. Aman} and \textit{G. Ciobanu}, Inf. Sci. 594, 360--370 (2022; Zbl 07810514) Full Text: DOI
Alhazov, Artiom; Freund, Rudolf; Ivanov, Sergiu P versus B: P systems as a formal framework for controllability of Boolean networks. (English) Zbl 07800492 Bordihn, Henning (ed.) et al., Proceedings of the 12th international workshop on non-classical models of automata and applications, NCMA 2022, Debrecen, Hungary, August 26–27, 2022. Waterloo: Open Publishing Association (OPA). Electron. Proc. Theor. Comput. Sci. (EPTCS) 367, 28-48 (2022). MSC: 68-XX 92-XX PDFBibTeX XMLCite \textit{A. Alhazov} et al., Electron. Proc. Theor. Comput. Sci. (EPTCS) 367, 28--48 (2022; Zbl 07800492) Full Text: arXiv Link
Liu, Jian; Xia, Ke-Lin; Wu, Jie; Yau, Stephen Shing-Toung; Wei, Guo-Wei Biomolecular topology: modelling and analysis. (English) Zbl 1501.55006 Acta Math. Sin., Engl. Ser. 38, No. 10, 1901-1938 (2022). MSC: 55N31 92E10 92D20 62R40 92C40 57Z10 55-02 57-02 92-02 PDFBibTeX XMLCite \textit{J. Liu} et al., Acta Math. Sin., Engl. Ser. 38, No. 10, 1901--1938 (2022; Zbl 1501.55006) Full Text: DOI
Hellmuth, Marc; Scholz, Guillaume E. From modular decomposition trees to level-1 networks: pseudo-cographs, polar-cats and prime polar-cats. (English) Zbl 1497.05218 Discrete Appl. Math. 321, 179-219 (2022). MSC: 05C70 05C85 92D15 PDFBibTeX XMLCite \textit{M. Hellmuth} and \textit{G. E. Scholz}, Discrete Appl. Math. 321, 179--219 (2022; Zbl 1497.05218) Full Text: DOI arXiv
Guterman, A. E.; Kreines, E. M.; Ostroukhova, N. V. Transformations of assembly number for 4-regular graphs. (English. Russian original) Zbl 1491.05118 J. Math. Sci., New York 262, No. 1, 11-26 (2022); translation from Zap. Nauchn. Semin. POMI 504, 21-46 (2021). MSC: 05C45 05C30 05C90 92D20 PDFBibTeX XMLCite \textit{A. E. Guterman} et al., J. Math. Sci., New York 262, No. 1, 11--26 (2022; Zbl 1491.05118); translation from Zap. Nauchn. Semin. POMI 504, 21--46 (2021) Full Text: DOI
Lafond, Manuel; Zhu, Binhai; Zou, Peng Computing the tandem duplication distance is NP-hard. (English) Zbl 1483.68504 SIAM J. Discrete Math. 36, No. 1, 64-91 (2022). MSC: 68W32 68Q17 68Q27 68Q45 92D10 PDFBibTeX XMLCite \textit{M. Lafond} et al., SIAM J. Discrete Math. 36, No. 1, 64--91 (2022; Zbl 1483.68504) Full Text: DOI arXiv
Bellamoli, Francesco; Franco, Giuditta; Kari, Lila; Lampis, Silvia; Ng, Timothy; Wang, Zihao Conjugate word blending: formal model and experimental implementation by XPCR. (English) Zbl 07735508 Nat. Comput. 20, No. 4, 647-658 (2021). MSC: 68Q07 68Q45 92C40 PDFBibTeX XMLCite \textit{F. Bellamoli} et al., Nat. Comput. 20, No. 4, 647--658 (2021; Zbl 07735508) Full Text: DOI
Garrett, James; Jonoska, Nataša; Kim, Hwee; Saito, Masahico DNA origami words, graphical structures and their rewriting systems. (English) Zbl 07735484 Nat. Comput. 20, No. 2, 217-231 (2021). MSC: 68Q07 68Q42 92D20 PDFBibTeX XMLCite \textit{J. Garrett} et al., Nat. Comput. 20, No. 2, 217--231 (2021; Zbl 07735484) Full Text: DOI
Bordihn, Henning; Mitrana, Victor; Păun, Andrei; Păun, Mihaela Hairpin completions and reductions: semilinearity properties. (English) Zbl 07735482 Nat. Comput. 20, No. 2, 193-203 (2021). MSC: 68Q45 92D20 PDFBibTeX XMLCite \textit{H. Bordihn} et al., Nat. Comput. 20, No. 2, 193--203 (2021; Zbl 07735482) Full Text: DOI
Barbuti, Roberto; Bove, Pasquale; Gori, Roberta; Gruska, Damas; Levi, Francesca; Milazzo, Paolo Encoding threshold Boolean networks into reaction systems for the analysis of gene regulatory networks. (English) Zbl 1519.68084 Fundam. Inform. 179, No. 2, 205-225 (2021). MSC: 68Q07 92C42 PDFBibTeX XMLCite \textit{R. Barbuti} et al., Fundam. Inform. 179, No. 2, 205--225 (2021; Zbl 1519.68084) Full Text: DOI
Hua, Hongbo; Wang, Maolin The connective eccentricity index and modified second Zagreb index of Parikh word representable graphs. (English) Zbl 1477.05031 Bull. Malays. Math. Sci. Soc. (2) 44, No. 6, 3689-3704 (2021). MSC: 05C09 05C12 05C07 05C92 92E10 PDFBibTeX XMLCite \textit{H. Hua} and \textit{M. Wang}, Bull. Malays. Math. Sci. Soc. (2) 44, No. 6, 3689--3704 (2021; Zbl 1477.05031) Full Text: DOI
Barbuti, Roberto; Gori, Roberta; Milazzo, Paolo Encoding Boolean networks into reaction systems for investigating causal dependencies in gene regulation. (English) Zbl 1512.92024 Theor. Comput. Sci. 881, 3-24 (2021). MSC: 92C40 92C42 68Q07 PDFBibTeX XMLCite \textit{R. Barbuti} et al., Theor. Comput. Sci. 881, 3--24 (2021; Zbl 1512.92024) Full Text: DOI
Franco, Giuditta; Manca, Vincenzo; Andreolli, Marco; Lampis, Silvia Emergence of random selections in evolution of biological populations. (English) Zbl 1500.92064 Theor. Comput. Sci. 862, 130-143 (2021). MSC: 92D15 PDFBibTeX XMLCite \textit{G. Franco} et al., Theor. Comput. Sci. 862, 130--143 (2021; Zbl 1500.92064) Full Text: DOI
Zhang, Chuan; Shen, Ziyuan; Wei, Wei; Zhao, Jing; Zhang, Zaichen; You, Xiaohu Molecular computing for Markov chains. (English) Zbl 07802768 Nat. Comput. 19, No. 3, 593-608 (2020). MSC: 68Q07 60J20 92C40 PDFBibTeX XMLCite \textit{C. Zhang} et al., Nat. Comput. 19, No. 3, 593--608 (2020; Zbl 07802768) Full Text: DOI arXiv
Ivanov, Sergiu; Petre, Ion Controllability of reaction systems. (English) Zbl 1469.68039 J. Membr. Comput. 2, No. 4, 290-302 (2020). MSC: 68Q07 68Q17 92C42 92C45 93B05 PDFBibTeX XMLCite \textit{S. Ivanov} and \textit{I. Petre}, J. Membr. Comput. 2, No. 4, 290--302 (2020; Zbl 1469.68039) Full Text: DOI arXiv
Hinze, Thomas Coping with dynamical reaction system topologies using deterministic P modules: a case study of photosynthesis. (English) Zbl 1469.68037 J. Membr. Comput. 2, No. 4, 281-289 (2020). MSC: 68Q07 92-10 92C80 PDFBibTeX XMLCite \textit{T. Hinze}, J. Membr. Comput. 2, No. 4, 281--289 (2020; Zbl 1469.68037) Full Text: DOI
Barbuti, Roberto; Gori, Roberta; Milazzo, Paolo; Nasti, Lucia A survey of gene regulatory networks modelling methods: from differential equations, to Boolean and qualitative bioinspired models. (English) Zbl 1469.92053 J. Membr. Comput. 2, No. 3, 207-226 (2020). MSC: 92C42 92C40 68Q07 68Q85 PDFBibTeX XMLCite \textit{R. Barbuti} et al., J. Membr. Comput. 2, No. 3, 207--226 (2020; Zbl 1469.92053) Full Text: DOI
Teh, Wen Chean; Atanasiu, Adrian Simulation of reaction systems by the strictly minimal ones. (English) Zbl 1469.68053 J. Membr. Comput. 2, No. 3, 162-170 (2020). MSC: 68Q07 92C40 PDFBibTeX XMLCite \textit{W. C. Teh} and \textit{A. Atanasiu}, J. Membr. Comput. 2, No. 3, 162--170 (2020; Zbl 1469.68053) Full Text: DOI arXiv
Johnson, Robert F.; Winfree, Erik Verifying polymer reaction networks using bisimulation. (English) Zbl 1460.68039 Theor. Comput. Sci. 843, 84-114 (2020). MSC: 68Q07 68Q60 92C40 92E20 PDFBibTeX XMLCite \textit{R. F. Johnson} and \textit{E. Winfree}, Theor. Comput. Sci. 843, 84--114 (2020; Zbl 1460.68039) Full Text: DOI Link
Guterman, A. E.; Kreines, E. M.; Ostroukhova, N. V. Double occurrence words: their graphs and matrices. (English. Russian original) Zbl 1448.05026 J. Math. Sci., New York 249, No. 2, 139-157 (2020); translation from Zap. Nauchn. Semin. POMI 482, 45-72 (2019). MSC: 05B20 05C50 05C90 92D10 PDFBibTeX XMLCite \textit{A. E. Guterman} et al., J. Math. Sci., New York 249, No. 2, 139--157 (2020; Zbl 1448.05026); translation from Zap. Nauchn. Semin. POMI 482, 45--72 (2019) Full Text: DOI
Eppstein, David; Havvaei, Elham Parameterized leaf power recognition via embedding into graph products. (English) Zbl 1452.68135 Algorithmica 82, No. 8, 2337-2359 (2020). MSC: 68R10 03B70 05C05 05C76 05C85 68Q27 92D15 PDFBibTeX XMLCite \textit{D. Eppstein} and \textit{E. Havvaei}, Algorithmica 82, No. 8, 2337--2359 (2020; Zbl 1452.68135) Full Text: DOI Link
Hellmuth, Marc; Seemann, Carsten R.; Stadler, Peter F. Generalized Fitch graphs. II: Sets of binary relations that are explained by edge-labeled trees. (English) Zbl 1442.05031 Discrete Appl. Math. 283, 495-511 (2020). MSC: 05C05 05C78 05C85 05C20 05C90 92D10 PDFBibTeX XMLCite \textit{M. Hellmuth} et al., Discrete Appl. Math. 283, 495--511 (2020; Zbl 1442.05031) Full Text: DOI arXiv
Geiß, Manuela; Laffitte, Marcos E. González; Sánchez, Alitzel López; Valdivia, Dulce I.; Hellmuth, Marc; Rosales, Maribel Hernández; Stadler, Peter F. Best match graphs and reconciliation of gene trees with species trees. (English) Zbl 1434.05035 J. Math. Biol. 80, No. 5, 1459-1495 (2020). MSC: 05C05 05C62 05C90 92B10 PDFBibTeX XMLCite \textit{M. Geiß} et al., J. Math. Biol. 80, No. 5, 1459--1495 (2020; Zbl 1434.05035) Full Text: DOI arXiv
Sempere, José M. On compensation loops in genomic duplications. (English) Zbl 1430.68149 Int. J. Found. Comput. Sci. 31, No. 1, 133-142 (2020). MSC: 68Q45 92D20 PDFBibTeX XMLCite \textit{J. M. Sempere}, Int. J. Found. Comput. Sci. 31, No. 1, 133--142 (2020; Zbl 1430.68149) Full Text: DOI
Manca, Vincenzo From biopolymer duplication to membrane duplication and beyond. (English) Zbl 1469.92046 J. Membr. Comput. 1, No. 4, 292-303 (2019). MSC: 92C37 92D20 PDFBibTeX XMLCite \textit{V. Manca}, J. Membr. Comput. 1, No. 4, 292--303 (2019; Zbl 1469.92046) Full Text: DOI
Eppstein, David; Havvaei, Elham Parameterized leaf power recognition via embedding into graph products. (English) Zbl 1520.68121 Paul, Christophe (ed.) et al., 13th international symposium on parameterized and exact computation, IPEC 2018, August 22–24, 2018, Helsinki, Finland. Wadern: Schloss Dagstuhl – Leibniz Zentrum für Informatik. LIPIcs – Leibniz Int. Proc. Inform. 115, Article 16, 14 p. (2019). MSC: 68R10 03B70 05C05 05C76 05C85 68Q27 92D15 PDFBibTeX XMLCite \textit{D. Eppstein} and \textit{E. Havvaei}, LIPIcs -- Leibniz Int. Proc. Inform. 115, Article 16, 14 p. (2019; Zbl 1520.68121) Full Text: DOI arXiv
Waldmajer, Jacek; Bonikowski, Zbigniew; Sakowski, Sebastian Theory of tailor automata. (English) Zbl 1423.68268 Theor. Comput. Sci. 785, 60-82 (2019). MSC: 68Q45 68Q05 92D20 PDFBibTeX XMLCite \textit{J. Waldmajer} et al., Theor. Comput. Sci. 785, 60--82 (2019; Zbl 1423.68268) Full Text: DOI
Kimoto, Nobuya; Komiya, Ken; Fujimoto, Kenzo; Kobayashi, Satoshi Monotonically controlling right linear grammars with unknown behaviors to output a target string. (English) Zbl 1423.68232 Theor. Comput. Sci. 777, 387-408 (2019). MSC: 68Q42 68Q05 92D20 PDFBibTeX XMLCite \textit{N. Kimoto} et al., Theor. Comput. Sci. 777, 387--408 (2019; Zbl 1423.68232) Full Text: DOI
Aman, Bogdan; Ciobanu, Gabriel Bonding calculus. (English) Zbl 07772470 Nat. Comput. 17, No. 4, 823-832 (2018). MSC: 92C40 92-10 PDFBibTeX XMLCite \textit{B. Aman} and \textit{G. Ciobanu}, Nat. Comput. 17, No. 4, 823--832 (2018; Zbl 07772470) Full Text: DOI
Bernini, Andrea; Brodo, Linda; Degano, Pierpaolo; Falaschi, Moreno; Hermith, Diana Process calculi for biological processes. (English) Zbl 07772437 Nat. Comput. 17, No. 2, 345-373 (2018). MSC: 92C42 92-08 PDFBibTeX XMLCite \textit{A. Bernini} et al., Nat. Comput. 17, No. 2, 345--373 (2018; Zbl 07772437) Full Text: DOI
Zhou, Kang; Huang, Yufang; Cheng, Zhen; Dong, Yafei Making all spanning tree problem based on sticker model. (English) Zbl 1482.92058 Math. Comput. Simul. 146, 229-239 (2018). MSC: 92D20 PDFBibTeX XMLCite \textit{K. Zhou} et al., Math. Comput. Simul. 146, 229--239 (2018; Zbl 1482.92058) Full Text: DOI
Teh, Wen Chean Compositions of functions and permutations specified by minimal reaction systems. (English) Zbl 1415.68100 Int. J. Found. Comput. Sci. 29, No. 7, 1165-1179 (2018). MSC: 68Q05 92C37 92C40 PDFBibTeX XMLCite \textit{W. C. Teh}, Int. J. Found. Comput. Sci. 29, No. 7, 1165--1179 (2018; Zbl 1415.68100) Full Text: DOI arXiv
Bain, Michael; Srinivasan, Ashwin Identification of biological transition systems using meta-interpreted logic programs. (English) Zbl 1461.68171 Mach. Learn. 107, No. 7, 1171-1206 (2018). MSC: 68T05 68N17 68Q55 68Q85 92C42 PDFBibTeX XMLCite \textit{M. Bain} and \textit{A. Srinivasan}, Mach. Learn. 107, No. 7, 1171--1206 (2018; Zbl 1461.68171) Full Text: DOI
Barbuti, Roberto; Gori, Roberta; Levi, Francesca; Milazzo, Paolo Generalized contexts for reaction systems: definition and study of dynamic causalities. (English) Zbl 1390.68301 Acta Inf. 55, No. 3, 227-267 (2018). MSC: 68Q05 68Q10 68Q60 92C40 PDFBibTeX XMLCite \textit{R. Barbuti} et al., Acta Inf. 55, No. 3, 227--267 (2018; Zbl 1390.68301) Full Text: DOI Link
Yoshida, Hiroshi A model for analyzing phenomena in multicellular organisms with multivariable polynomials: polynomial life. (English) Zbl 1381.92020 Int. J. Biomath. 11, No. 1, Article ID 1850007, 10 p. (2018). MSC: 92C37 92C99 PDFBibTeX XMLCite \textit{H. Yoshida}, Int. J. Biomath. 11, No. 1, Article ID 1850007, 10 p. (2018; Zbl 1381.92020) Full Text: DOI
Enaganti, Srujan Kumar; Ibarra, Oscar H.; Kari, Lila; Kopecki, Steffen On the overlap assembly of strings and languages. (English) Zbl 1415.68127 Nat. Comput. 16, No. 1, 175-185 (2017). MSC: 68Q45 68Q05 68Q10 92D20 PDFBibTeX XMLCite \textit{S. K. Enaganti} et al., Nat. Comput. 16, No. 1, 175--185 (2017; Zbl 1415.68127) Full Text: DOI
Giannakis, Konstantinos; Andronikos, Theodore Membrane automata for modeling biomolecular processes. (English) Zbl 1415.68084 Nat. Comput. 16, No. 1, 151-163 (2017). MSC: 68Q05 68Q10 92C37 PDFBibTeX XMLCite \textit{K. Giannakis} and \textit{T. Andronikos}, Nat. Comput. 16, No. 1, 151--163 (2017; Zbl 1415.68084) Full Text: DOI
Zang, Wenke; Zhang, Weining; Zhang, Wenqian; Liu, Xiyu A genetic algorithm using triplet nucleotide encoding and DNA reproduction operations for unconstrained optimization problems. (English) Zbl 1461.90199 Algorithms (Basel) 10, No. 3, Paper No. 76, 15 p. (2017). MSC: 90C59 68T05 92D10 PDFBibTeX XMLCite \textit{W. Zang} et al., Algorithms (Basel) 10, No. 3, Paper No. 76, 15 p. (2017; Zbl 1461.90199) Full Text: DOI
Manca, Vincenzo The principles of informational genomics. (English) Zbl 1383.92027 Theor. Comput. Sci. 701, 190-202 (2017). MSC: 92C40 92D10 PDFBibTeX XMLCite \textit{V. Manca}, Theor. Comput. Sci. 701, 190--202 (2017; Zbl 1383.92027) Full Text: DOI
Cho, Da-Jung; Han, Yo-Sub; Ng, Timothy; Salomaa, Kai Outfix-guided insertion. (English) Zbl 1382.68133 Theor. Comput. Sci. 701, 70-84 (2017). MSC: 68Q45 92D20 PDFBibTeX XMLCite \textit{D.-J. Cho} et al., Theor. Comput. Sci. 701, 70--84 (2017; Zbl 1382.68133) Full Text: DOI arXiv
Brijder, Robert Sorting by reversals and the theory of 4-regular graphs. (English) Zbl 1383.92049 Theor. Comput. Sci. 701, 40-53 (2017). MSC: 92D10 92D15 05C90 PDFBibTeX XMLCite \textit{R. Brijder}, Theor. Comput. Sci. 701, 40--53 (2017; Zbl 1383.92049) Full Text: DOI arXiv
Adamyk, K. L. M.; Holmes, E.; Mayfield, G. R.; Moritz, D. J.; Scheepers, M.; Tenner, B. E.; Wauck, H. C. Sorting permutations: games, genomes, and cycles. (English) Zbl 1386.05002 Discrete Math. Algorithms Appl. 9, No. 5, Article ID 1750063, 31 p. (2017). MSC: 05A05 68P10 91A46 05E15 92D15 PDFBibTeX XMLCite \textit{K. L. M. Adamyk} et al., Discrete Math. Algorithms Appl. 9, No. 5, Article ID 1750063, 31 p. (2017; Zbl 1386.05002) Full Text: DOI arXiv
Hellmuth, Marc; Stadler, Peter F.; Wieseke, Nicolas The mathematics of xenology: di-cographs, symbolic ultrametrics, 2-structures and tree-representable systems of binary relations. (English) Zbl 1368.05023 J. Math. Biol. 75, No. 1, 199-237 (2017). MSC: 05C05 05C90 92D15 68Q17 PDFBibTeX XMLCite \textit{M. Hellmuth} et al., J. Math. Biol. 75, No. 1, 199--237 (2017; Zbl 1368.05023) Full Text: DOI arXiv
Ota, Makoto; Seki, Shinnosuke Rule set design problems for oritatami systems. (English) Zbl 1370.68096 Theor. Comput. Sci. 671, 26-35 (2017). MSC: 68Q05 68Q10 68Q25 68U05 92D20 PDFBibTeX XMLCite \textit{M. Ota} and \textit{S. Seki}, Theor. Comput. Sci. 671, 26--35 (2017; Zbl 1370.68096) Full Text: DOI
Hinze, Thomas; Weber, Lea Louise; Hatnik, Uwe Walking membranes: grid-exploring P systems with artificial evolution for multi-purpose topological optimisation of cascaded processes. (English) Zbl 1483.68120 Leporati, Alberto (ed.) et al., Membrane computing. 17th international conference, CMC 2016, Milan, Italy, July 25–29, 2016. Revised selected papers. Cham: Springer. Lect. Notes Comput. Sci. 10105, 251-271 (2017). MSC: 68Q07 90B30 91B24 92C37 PDFBibTeX XMLCite \textit{T. Hinze} et al., Lect. Notes Comput. Sci. 10105, 251--271 (2017; Zbl 1483.68120) Full Text: DOI
Aman, Bogdan; Ciobanu, Gabriel Computational power of protein networks. (English) Zbl 1483.68109 Leporati, Alberto (ed.) et al., Membrane computing. 17th international conference, CMC 2016, Milan, Italy, July 25–29, 2016. Revised selected papers. Cham: Springer. Lect. Notes Comput. Sci. 10105, 103-118 (2017). MSC: 68Q07 92C42 PDFBibTeX XMLCite \textit{B. Aman} and \textit{G. Ciobanu}, Lect. Notes Comput. Sci. 10105, 103--118 (2017; Zbl 1483.68109) Full Text: DOI
Cavaliere, Matteo; Sanchez, Alvaro The evolutionary resilience of distributed cellular computing. (English) Zbl 1483.68112 Leporati, Alberto (ed.) et al., Membrane computing. 17th international conference, CMC 2016, Milan, Italy, July 25–29, 2016. Revised selected papers. Cham: Springer. Lect. Notes Comput. Sci. 10105, 3-15 (2017). MSC: 68Q07 68Q10 92C37 92C40 92D15 PDFBibTeX XMLCite \textit{M. Cavaliere} and \textit{A. Sanchez}, Lect. Notes Comput. Sci. 10105, 3--15 (2017; Zbl 1483.68112) Full Text: DOI Link
Toro, Mauricio; Philippou, Anna; Arboleda, Sair; Puerta, María; Vélez S., Carlos M. Mean-field semantics for a process calculus for spatially-explicit ecological models. (English) Zbl 1480.92232 Muñoz, César A. (ed.) et al., Proceedings of the eleventh international workshop on developments in computational models, DCM 2015, Cali, Colombia, October 28, 2015. Waterloo: Open Publishing Association (OPA). Electron. Proc. Theor. Comput. Sci. (EPTCS) 204, 79-94 (2016). MSC: 92D40 68Q55 68Q85 PDFBibTeX XMLCite \textit{M. Toro} et al., Electron. Proc. Theor. Comput. Sci. (EPTCS) 204, 79--94 (2016; Zbl 1480.92232) Full Text: arXiv Link
Bertens, Laura M. F.; Kleijn, Jetty; Hille, Sander C.; Heiner, Monika; Koutny, Maciej; Verbeek, Fons J. Modeling biological gradient formation: combining partial differential equations and Petri nets. (English) Zbl 1417.92041 Nat. Comput. 15, No. 4, 665-675 (2016). MSC: 92C40 35Q92 68Q85 PDFBibTeX XMLCite \textit{L. M. F. Bertens} et al., Nat. Comput. 15, No. 4, 665--675 (2016; Zbl 1417.92041) Full Text: DOI
Martínez-del-Amor, Miguel A.; Macías-Ramos, Luis F.; Valencia-Cabrera, Luis; Pérez-Jiménez, Mario J. Parallel simulation of population dynamics P systems: updates and roadmap. (English) Zbl 1415.68264 Nat. Comput. 15, No. 4, 565-573 (2016). MSC: 68U20 68Q05 68Q10 92D40 PDFBibTeX XMLCite \textit{M. A. Martínez-del-Amor} et al., Nat. Comput. 15, No. 4, 565--573 (2016; Zbl 1415.68264) Full Text: DOI Link
Burns, Jonathan; Kukushkin, Denys; Chen, Xiao; Landweber, Laura F.; Saito, Masahico; Jonoska, Nataša Recurring patterns among scrambled genes in the encrypted genome of the ciliate Oxytricha trifallax. (English) Zbl 1348.92117 J. Theor. Biol. 410, 171-180 (2016). MSC: 92D20 92C40 PDFBibTeX XMLCite \textit{J. Burns} et al., J. Theor. Biol. 410, 171--180 (2016; Zbl 1348.92117) Full Text: DOI
Ben-Naoum, Farah; Godin, Christophe Algorithmic height compression of unordered trees. (English) Zbl 1343.92287 J. Theor. Biol. 389, 237-252 (2016). MSC: 92C80 05C90 PDFBibTeX XMLCite \textit{F. Ben-Naoum} and \textit{C. Godin}, J. Theor. Biol. 389, 237--252 (2016; Zbl 1343.92287) Full Text: DOI HAL
Olarte, C.; Chiarugi, D.; Falaschi, M.; Hermith, D. A proof theoretic view of spatial and temporal dependencies in biochemical systems. (English) Zbl 1344.68140 Theor. Comput. Sci. 641, 25-42 (2016). MSC: 68Q60 03F52 68Q05 68Q10 92C40 PDFBibTeX XMLCite \textit{C. Olarte} et al., Theor. Comput. Sci. 641, 25--42 (2016; Zbl 1344.68140) Full Text: DOI
Kuppusamy, Lakshmanan; Mahendran, Anand Modelling DNA and RNA secondary structures using matrix insertion-deletion systems. (English) Zbl 1336.92062 Int. J. Appl. Math. Comput. Sci. 26, No. 1, 245-258 (2016). MSC: 92D20 92C40 PDFBibTeX XMLCite \textit{L. Kuppusamy} and \textit{A. Mahendran}, Int. J. Appl. Math. Comput. Sci. 26, No. 1, 245--258 (2016; Zbl 1336.92062) Full Text: DOI
Gómez Aíza, Ricardo RNA structures and dissections of polygons: an invitation to analytic combinatorics. (Spanish) Zbl 1439.92142 Misc. Mat. 60, 105-130 (2015). MSC: 92D20 05A15 PDFBibTeX XMLCite \textit{R. Gómez Aíza}, Misc. Mat. 60, 105--130 (2015; Zbl 1439.92142) Full Text: Link
Dulio, Paolo; Frosini, Andrea; Pagani, Silvia M. C. A geometrical characterization of regions of uniqueness and applications to discrete tomography. (English) Zbl 1329.92064 Inverse Probl. 31, No. 12, Article ID 125011, 31 p. (2015). MSC: 92C55 35R30 PDFBibTeX XMLCite \textit{P. Dulio} et al., Inverse Probl. 31, No. 12, Article ID 125011, 31 p. (2015; Zbl 1329.92064) Full Text: DOI Link
Macías-Ramos, Luis F.; Pérez-Jiménez, Mario J.; Riscos-Núñez, Agustín; Valencia-Cabrera, Luis Membrane fission versus cell division: when membrane proliferation is not enough. (English) Zbl 1332.68049 Theor. Comput. Sci. 608, Part 1, 57-65 (2015). MSC: 68Q05 68Q25 92C37 PDFBibTeX XMLCite \textit{L. F. Macías-Ramos} et al., Theor. Comput. Sci. 608, Part 1, 57--65 (2015; Zbl 1332.68049) Full Text: DOI
Barbuti, Roberto; Bove, Pasquale; Milazzo, Paolo; Pardini, Giovanni Minimal probabilistic P systems for modelling ecological systems. (English) Zbl 1333.92068 Theor. Comput. Sci. 608, Part 1, 36-56 (2015). MSC: 92D40 68Q05 68Q60 68U20 PDFBibTeX XMLCite \textit{R. Barbuti} et al., Theor. Comput. Sci. 608, Part 1, 36--56 (2015; Zbl 1333.92068) Full Text: DOI
Brijder, Robert Recombination faults in gene assembly in ciliates modeled using multimatroids. (English) Zbl 1337.92139 Theor. Comput. Sci. 608, Part 1, 27-35 (2015). MSC: 92D10 05C90 05B35 PDFBibTeX XMLCite \textit{R. Brijder}, Theor. Comput. Sci. 608, Part 1, 27--35 (2015; Zbl 1337.92139) Full Text: DOI
Ehrenfeucht, Andrzej; Rozenberg, Grzegorz Standard and ordered zoom structures. (English) Zbl 1332.68047 Theor. Comput. Sci. 608, Part 1, 4-15 (2015). MSC: 68Q05 68Q85 92C45 PDFBibTeX XMLCite \textit{A. Ehrenfeucht} and \textit{G. Rozenberg}, Theor. Comput. Sci. 608, Part 1, 4--15 (2015; Zbl 1332.68047) Full Text: DOI
Brijder, Robert Dominance and T-invariants for Petri nets and chemical reaction networks. (English) Zbl 1404.68077 Phillips, Andrew (ed.) et al., DNA computing and molecular programming. 21st international conference, DNA 21, Boston and Cambridge, MA, USA, August 17–21, 2015. Proceedings. Cham: Springer (ISBN 978-3-319-21998-1/pbk; 978-3-319-21999-8/ebook). Lecture Notes in Computer Science 9211, 1-15 (2015). MSC: 68Q85 92E20 PDFBibTeX XMLCite \textit{R. Brijder}, Lect. Notes Comput. Sci. 9211, 1--15 (2015; Zbl 1404.68077) Full Text: DOI
Csuhaj-Varjú, Erzsébet; Freund, Rudolf; Vaszil, György A connection between red-green Turing machines and Watson-Crick T0L systems. (English) Zbl 1415.68076 Durand-Lose, Jérôme (ed.) et al., Machines, computations, and universality. 7th international conference, MCU 2015, Famagusta, North Cyprus, September 9–11, 2015. Proceedings. Cham: Springer. Lect. Notes Comput. Sci. 9288, 31-44 (2015). MSC: 68Q05 68Q42 92D20 PDFBibTeX XMLCite \textit{E. Csuhaj-Varjú} et al., Lect. Notes Comput. Sci. 9288, 31--44 (2015; Zbl 1415.68076) Full Text: DOI
Cabessa, Jérémie; Duparc, Jacques Expressive power of non-deterministic evolving recurrent neural networks in terms of their attractor dynamics. (English) Zbl 1465.68084 Calude, S. (ed.) et al., Unconventional computation and natural computation. 14th international conference, UCNC 2015, Auckland, New Zealand, August 30 – September 3, 2015. Proceedings. Cham: Springer. Lect. Notes Comput. Sci. 9252, 144-156 (2015). MSC: 68Q09 37B35 68Q45 92B20 PDFBibTeX XMLCite \textit{J. Cabessa} and \textit{J. Duparc}, Lect. Notes Comput. Sci. 9252, 144--156 (2015; Zbl 1465.68084) Full Text: DOI
Pancerz, Krzysztof; Schumann, Andrew Rough set models of Physarum machines. (English) Zbl 1338.68075 Int. J. Gen. Syst. 44, No. 3-4, 314-325 (2015). MSC: 68Q05 92C80 PDFBibTeX XMLCite \textit{K. Pancerz} and \textit{A. Schumann}, Int. J. Gen. Syst. 44, No. 3--4, 314--325 (2015; Zbl 1338.68075) Full Text: DOI
Sosík, Petr; Cienciala, Luděk Computational power of cell separation in tissue P systems. (English) Zbl 1354.68082 Inf. Sci. 279, 805-815 (2014). MSC: 68Q05 68Q25 92C42 PDFBibTeX XMLCite \textit{P. Sosík} and \textit{L. Cienciala}, Inf. Sci. 279, 805--815 (2014; Zbl 1354.68082) Full Text: DOI
García-Quismondo, Manuel; Martínez-del-Amor, Miguel A.; Pérez-Jiménez, Mario J. Probabilistic guarded P systems, a new formal modelling framework. (English) Zbl 1457.68096 Gheorghe, Marian (ed.) et al., Membrane computing. 15th international conference, CMC 2014, Prague, Czech Republic, August 20–22, 2014. Revised selected papers. Cham: Springer. Lect. Notes Comput. Sci. 8961, 194-214 (2014). MSC: 68Q07 92-10 92D25 PDFBibTeX XMLCite \textit{M. García-Quismondo} et al., Lect. Notes Comput. Sci. 8961, 194--214 (2014; Zbl 1457.68096) Full Text: DOI
Kleijn, Jetty; Koutny, Maciej; Pietkiewicz-Koutny, Marta Tissue systems and Petri net synthesis. (English) Zbl 1428.68202 Koutny, Maciej (ed.) et al., Transactions on Petri Nets and Other Models of Concurrency IX. Berlin: Springer. Lect. Notes Comput. Sci. 8910, 124-146 (2014). MSC: 68Q85 92C40 PDFBibTeX XMLCite \textit{J. Kleijn} et al., Lect. Notes Comput. Sci. 8910, 124--146 (2014; Zbl 1428.68202) Full Text: DOI
Deshpande, Abhishek; Gopalkrishnan, Manoj Autocatalysis in reaction networks. (English) Zbl 1330.92139 Bull. Math. Biol. 76, No. 10, 2570-2595 (2014). MSC: 92E20 PDFBibTeX XMLCite \textit{A. Deshpande} and \textit{M. Gopalkrishnan}, Bull. Math. Biol. 76, No. 10, 2570--2595 (2014; Zbl 1330.92139) Full Text: DOI arXiv
Ehrenfeucht, Andrzej; Rozenberg, Grzegorz Zoom structures and reaction systems yield exploration systems. (English) Zbl 1360.68463 Int. J. Found. Comput. Sci. 25, No. 3, 275-305 (2014). MSC: 68Q05 68Q10 92C42 PDFBibTeX XMLCite \textit{A. Ehrenfeucht} and \textit{G. Rozenberg}, Int. J. Found. Comput. Sci. 25, No. 3, 275--305 (2014; Zbl 1360.68463) Full Text: DOI
Pardini, Giovanni; Barbuti, Roberto; Maggiolo-Schettini, Andrea; Milazzo, Paolo; Tini, Simone Compositional semantics and behavioural equivalences for reaction systems with restriction. (English) Zbl 1360.68574 Theor. Comput. Sci. 551, 1-21 (2014). MSC: 68Q55 68Q85 92C45 PDFBibTeX XMLCite \textit{G. Pardini} et al., Theor. Comput. Sci. 551, 1--21 (2014; Zbl 1360.68574) Full Text: DOI
Danos, Vincent; Garnier, Ilias Free energy of Petri nets. (English) Zbl 1408.68099 van Breugel, Franck (ed.) et al., Horizons of the mind. A tribute to Prakash Panangaden. Essays dedicated to Prakash Panangaden on the occasion of his 60th birthday. Berlin: Springer. Lect. Notes Comput. Sci. 8464, 268-289 (2014). MSC: 68Q85 60J20 68Q87 92E20 PDFBibTeX XMLCite \textit{V. Danos} and \textit{I. Garnier}, Lect. Notes Comput. Sci. 8464, 268--289 (2014; Zbl 1408.68099) Full Text: DOI
Fazekas, Szilárd Zsolt; Ito, Hiro; Okuno, Yasushi; Seki, Shinnosuke; Taneishi, Kei On computational complexity of graph inference from counting. (English) Zbl 1333.68141 Nat. Comput. 12, No. 4, 589-603 (2013). MSC: 68Q25 92E10 PDFBibTeX XMLCite \textit{S. Z. Fazekas} et al., Nat. Comput. 12, No. 4, 589--603 (2013; Zbl 1333.68141) Full Text: DOI
Burns, Jonathan; Dolzhenko, Egor; Jonoska, Nataša; Muche, Tilahun; Saito, Masahico Four-regular graphs with rigid vertices associated to DNA recombination. (English) Zbl 1287.05063 Discrete Appl. Math. 161, No. 10-11, 1378-1394 (2013). MSC: 05C30 05C90 92D20 92D10 PDFBibTeX XMLCite \textit{J. Burns} et al., Discrete Appl. Math. 161, No. 10--11, 1378--1394 (2013; Zbl 1287.05063) Full Text: DOI
Kobayashi, Satoshi Enumeration approach to computing chemical equilibria. (English) Zbl 1297.92095 Theor. Comput. Sci. 499, 51-87 (2013). MSC: 92E10 05C65 90C25 PDFBibTeX XMLCite \textit{S. Kobayashi}, Theor. Comput. Sci. 499, 51--87 (2013; Zbl 1297.92095) Full Text: DOI
Sosík, Petr; Păun, Andrei; Rodríguez-Patón, Alfonso P systems with proteins on membranes characterize PSPACE. (English) Zbl 1293.68175 Theor. Comput. Sci. 488, 78-95 (2013). MSC: 68Q25 68Q05 68Q10 92D20 PDFBibTeX XMLCite \textit{P. Sosík} et al., Theor. Comput. Sci. 488, 78--95 (2013; Zbl 1293.68175) Full Text: DOI
Manca, Vincenzo; Marchetti, Luca An algebraic formulation of inverse problems in MP dynamics. (English) Zbl 1273.68194 Int. J. Comput. Math. 90, No. 4, 845-856 (2013). MSC: 68Q42 39A10 65F30 62J05 92-08 PDFBibTeX XMLCite \textit{V. Manca} and \textit{L. Marchetti}, Int. J. Comput. Math. 90, No. 4, 845--856 (2013; Zbl 1273.68194) Full Text: DOI
Gratie, Diana-Elena; Iancu, Bogdan; Petre, Ion ODE analysis of biological systems. (English) Zbl 1383.92033 Bernardo, Marco (ed.) et al., Formal methods for dynamical systems. 13th international school on formal methods for the design of computer, communication, and software systems, SFM 2013, Bertinoro, Italy, June 17–22, 2013. Advanced lectures. Berlin: Springer (ISBN 978-3-642-38873-6/pbk). Lecture Notes in Computer Science 7938, 29-62 (2013). MSC: 92C42 92C40 92D25 PDFBibTeX XMLCite \textit{D.-E. Gratie} et al., Lect. Notes Comput. Sci. 7938, 29--62 (2013; Zbl 1383.92033) Full Text: DOI
Křížek, Michal; Křížek, Pavel Why has nature invented three stop codons of DNA and only one start codon? (English) Zbl 1397.92533 J. Theor. Biol. 304, 183-187 (2012). MSC: 92D20 92C40 PDFBibTeX XMLCite \textit{M. Křížek} and \textit{P. Křížek}, J. Theor. Biol. 304, 183--187 (2012; Zbl 1397.92533) Full Text: DOI
Ehrenfeucht, Andrzej; Main, Michael; Rozenberg, Grzegorz; Brown, Allison Thompson Stability and chaos in reaction systems. (English) Zbl 1279.68094 Int. J. Found. Comput. Sci. 23, No. 5, 1173-1184 (2012). MSC: 68Q10 92C42 37N25 92C40 68Q05 PDFBibTeX XMLCite \textit{A. Ehrenfeucht} et al., Int. J. Found. Comput. Sci. 23, No. 5, 1173--1184 (2012; Zbl 1279.68094) Full Text: DOI
Colomer, M. Angels; Pérez-Hurtado, Ignacio; Pérez-Jiménez, Mario J. Comparing simulation algorithms for multienvironment probabilistic P systems over a standard virtual ecosystem. (English) Zbl 1251.68108 Nat. Comput. 11, No. 3, 369-379 (2012). MSC: 68Q10 92C42 92D40 PDFBibTeX XMLCite \textit{M. A. Colomer} et al., Nat. Comput. 11, No. 3, 369--379 (2012; Zbl 1251.68108) Full Text: DOI
Okubo, Fumiya; Kobayashi, Satoshi; Yokomori, Takashi On the properties of language classes defined by bounded reaction automata. (English) Zbl 1252.68180 Theor. Comput. Sci. 454, 206-221 (2012). MSC: 68Q45 68Q05 92C40 PDFBibTeX XMLCite \textit{F. Okubo} et al., Theor. Comput. Sci. 454, 206--221 (2012; Zbl 1252.68180) Full Text: DOI arXiv
Corolli, Luca; Maj, Carlo; Marini, Fabrizio; Besozzi, Daniela; Mauri, Giancarlo An excursion in reaction systems: from computer science to biology. (English) Zbl 1247.68086 Theor. Comput. Sci. 454, 95-108 (2012). MSC: 68Q05 68Q10 92C40 92C37 PDFBibTeX XMLCite \textit{L. Corolli} et al., Theor. Comput. Sci. 454, 95--108 (2012; Zbl 1247.68086) Full Text: DOI
Brijder, Robert; Harju, Tero; Hoogeboom, Hendrik Jan Pivots, determinants, and perfect matchings of graphs. (English) Zbl 1251.05132 Theor. Comput. Sci. 454, 64-71 (2012). MSC: 05C70 05C90 92D10 PDFBibTeX XMLCite \textit{R. Brijder} et al., Theor. Comput. Sci. 454, 64--71 (2012; Zbl 1251.05132) Full Text: DOI arXiv
Azimi, Sepinoud; Harju, Tero; Langille, Miika; Petre, Ion Simple gene assembly as a rewriting of directed overlap-inclusion graphs. (English) Zbl 1402.92292 Theor. Comput. Sci. 454, 30-37 (2012). MSC: 92D10 05C90 68R10 PDFBibTeX XMLCite \textit{S. Azimi} et al., Theor. Comput. Sci. 454, 30--37 (2012; Zbl 1402.92292) Full Text: DOI
Angeleska, Angela; Jonoska, Nataša; Saito, Masahico Rewriting rule chains modeling DNA rearrangement pathways. (English) Zbl 1284.68314 Theor. Comput. Sci. 454, 5-22 (2012). MSC: 68Q42 92D20 PDFBibTeX XMLCite \textit{A. Angeleska} et al., Theor. Comput. Sci. 454, 5--22 (2012; Zbl 1284.68314) Full Text: DOI
Brijder, R.; Ehrenfeucht, A.; Rozenberg, G. Representing reaction systems by trees. (English) Zbl 1353.68080 Dinneen, Michael J. (ed.) et al., Computation, physics and beyond. International workshop on theoretical computer science, WTCS 2012, dedicated to Cristian S. Calude on the occasion of his 60th birthday, Auckland, New Zealand, February 21–24, 2012. Revised selected and invited papers. Berlin: Springer (ISBN 978-3-642-27653-8/pbk). Lecture Notes in Computer Science 7160, 330-342 (2012). MSC: 68Q05 92C37 PDFBibTeX XMLCite \textit{R. Brijder} et al., Lect. Notes Comput. Sci. 7160, 330--342 (2012; Zbl 1353.68080) Full Text: DOI Link
Giavitto, Jean-Louis; Klaudel, Hanna; Pommereau, Franck Integrated regulatory networks (IRNs): spatially organized biochemical modules. (English) Zbl 1238.92013 Theor. Comput. Sci. 431, 219-234 (2012). MSC: 92C42 68Q42 PDFBibTeX XMLCite \textit{J.-L. Giavitto} et al., Theor. Comput. Sci. 431, 219--234 (2012; Zbl 1238.92013) Full Text: DOI
Coppo, Mario; Damiani, Ferruccio; Drocco, Maurizio; Grassi, Elena; Sciacca, Eva; Spinella, Salvatore; Troina, Angelo Simulation techniques for the calculus of wrapped compartments. (English) Zbl 1238.68096 Theor. Comput. Sci. 431, 75-95 (2012). MSC: 68Q85 92B05 68Q42 PDFBibTeX XMLCite \textit{M. Coppo} et al., Theor. Comput. Sci. 431, 75--95 (2012; Zbl 1238.68096) Full Text: DOI arXiv
Gunji, Yukio-Pegio; Shirakawa, Tomohiro; Niizato, Takayuki; Yamachiyo, Masaki; Tani, Iori An adaptive and robust biological network based on the vacant-particle transportation model. (English) Zbl 1405.92104 J. Theor. Biol. 272, 187-200 (2011). MSC: 92C42 68Q80 92D50 PDFBibTeX XMLCite \textit{Y.-P. Gunji} et al., J. Theor. Biol. 272, 187--200 (2011; Zbl 1405.92104) Full Text: DOI
Manrique, Daniel; Rodríguez-Patón, Alfonso; Sosík, Petr On the scalability of biocomputing algorithms: the case of the maximum clique problem. (English) Zbl 1242.68292 Theor. Comput. Sci. 412, No. 51, 7075-7086 (2011). MSC: 68T20 05C69 68Q10 92C40 PDFBibTeX XMLCite \textit{D. Manrique} et al., Theor. Comput. Sci. 412, No. 51, 7075--7086 (2011; Zbl 1242.68292) Full Text: DOI
Pflueger, Nathan Graph reductions, binary rank, and pivots in gene assembly. (English) Zbl 1237.05181 Discrete Appl. Math. 159, No. 17, 2117-2134 (2011). MSC: 05C76 05C25 92D10 PDFBibTeX XMLCite \textit{N. Pflueger}, Discrete Appl. Math. 159, No. 17, 2117--2134 (2011; Zbl 1237.05181) Full Text: DOI arXiv
Lobo, Daniel; Vico, Francisco J.; Dassow, Jürgen Graph grammars with string-regulated rewriting. (English) Zbl 1253.68198 Theor. Comput. Sci. 412, No. 43, 6101-6111 (2011). MSC: 68Q42 92D10 PDFBibTeX XMLCite \textit{D. Lobo} et al., Theor. Comput. Sci. 412, No. 43, 6101--6111 (2011; Zbl 1253.68198) Full Text: DOI
Freund, Rudolf; Verlan, Sergey (Tissue) P systems working in the \(k\)-restricted minimally or maximally parallel transition mode. (English) Zbl 1217.68100 Nat. Comput. 10, No. 2, 821-833 (2011). MSC: 68Q10 68Q05 92C42 PDFBibTeX XMLCite \textit{R. Freund} and \textit{S. Verlan}, Nat. Comput. 10, No. 2, 821--833 (2011; Zbl 1217.68100) Full Text: DOI
Franco, Giuditta; Manca, Vincenzo Algorithmic applications of XPCR. (English) Zbl 1217.92046 Nat. Comput. 10, No. 2, 805-819 (2011). MSC: 92C42 68Q05 92C45 68Q10 PDFBibTeX XMLCite \textit{G. Franco} and \textit{V. Manca}, Nat. Comput. 10, No. 2, 805--819 (2011; Zbl 1217.92046) Full Text: DOI
Aman, Bogdan; Ciobanu, Gabriel Mutual mobile membranes with objects on surface. (English) Zbl 1217.92037 Nat. Comput. 10, No. 2, 777-793 (2011). MSC: 92C37 92C99 68Q10 92-08 PDFBibTeX XMLCite \textit{B. Aman} and \textit{G. Ciobanu}, Nat. Comput. 10, No. 2, 777--793 (2011; Zbl 1217.92037) Full Text: DOI
Salomaa, Arto On some biologically motivated control devices for parallel rewriting. (English) Zbl 1330.68137 Kelemen, Jozef (ed.) et al., Computation, cooperation, and life. Essays dedicated to Gheorghe Păun on the occasion of his 60th birthday. Berlin: Springer (ISBN 978-3-642-19999-8/pbk). Lecture Notes in Computer Science 6610, 181-190 (2011). MSC: 68Q42 68Q45 92D20 PDFBibTeX XMLCite \textit{A. Salomaa}, Lect. Notes Comput. Sci. 6610, 181--190 (2011; Zbl 1330.68137) Full Text: DOI
Czeizler, Elena; Czeizler, Eugen; Kari, Lila; Seki, Shinnosuke An extension of the Lyndon-Schützenberger result to pseudoperiodic words. (English) Zbl 1214.68266 Inf. Comput. 209, No. 4, 717-730 (2011). MSC: 68R15 92D20 PDFBibTeX XMLCite \textit{E. Czeizler} et al., Inf. Comput. 209, No. 4, 717--730 (2011; Zbl 1214.68266) Full Text: DOI