Orhobor, Oghenejokpeme I.; Alexandrov, Nickolai N.; King, Ross D. Predicting Rice phenotypes with meta and multi-target learning. (English) Zbl 07289225 Mach. Learn. 109, No. 11, 2195-2212 (2020). MSC: 68T05 PDF BibTeX XML Cite \textit{O. I. Orhobor} et al., Mach. Learn. 109, No. 11, 2195--2212 (2020; Zbl 07289225) Full Text: DOI
Abou-Shaara, Hossam Farag Using simple statistics to compare genetic sequences. (English) Zbl 07280230 Thail. Stat. 18, No. 3, 373-380 (2020). MSC: 62P10 92C15 62J10 62H30 PDF BibTeX XML Cite \textit{H. F. Abou-Shaara}, Thail. Stat. 18, No. 3, 373--380 (2020; Zbl 07280230) Full Text: Link
Xu, Hongyan Big data challenges in genomics. (English) Zbl 1444.62126 Rao, Arni Srinivasa (ed.) et al., Principles and methods for data science. Amsterdam: Elsevier/North Holland. Handb. Stat. 43, 337-348 (2020). MSC: 62P10 62R07 92-08 PDF BibTeX XML Cite \textit{H. Xu}, Handb. Stat. 43, 337--348 (2020; Zbl 1444.62126) Full Text: DOI
Gobonamang, Tshepo Kitso; Mpoeleng, Dimane Counter based suffix tree for DNA pattern repeats. (English) Zbl 1435.68070 Theor. Comput. Sci. 814, 1-12 (2020). MSC: 68P05 92D20 PDF BibTeX XML Cite \textit{T. K. Gobonamang} and \textit{D. Mpoeleng}, Theor. Comput. Sci. 814, 1--12 (2020; Zbl 1435.68070) Full Text: DOI
Poormohammadi, Hadi; Zarchi, Mohsen Sardari; Ghaneai, Hossein NCHB: a method for constructing rooted phylogenetic networks from rooted triplets based on height function and binarization. (English) Zbl 1430.92057 J. Theor. Biol. 489, Article ID 110144, 13 p. (2020). MSC: 92D15 05C90 PDF BibTeX XML Cite \textit{H. Poormohammadi} et al., J. Theor. Biol. 489, Article ID 110144, 13 p. (2020; Zbl 1430.92057) Full Text: DOI
Marchet, Camille; Lecompte, Lolita; Limasset, Antoine; Bittner, Lucie; Peterlongo, Pierre A resource-frugal probabilistic dictionary and applications in bioinformatics. (English) Zbl 1434.68132 Discrete Appl. Math. 274, 92-102 (2020). MSC: 68P05 92D10 PDF BibTeX XML Cite \textit{C. Marchet} et al., Discrete Appl. Math. 274, 92--102 (2020; Zbl 1434.68132) Full Text: DOI
Kounelis, Fotios; Makris, Christos Comparison between text compression algorithms in biological sequences. (English) Zbl 1436.68092 Inf. Comput. 270, Article ID 104466, 8 p. (2020). MSC: 68P20 68P30 68W32 92-08 PDF BibTeX XML Cite \textit{F. Kounelis} and \textit{C. Makris}, Inf. Comput. 270, Article ID 104466, 8 p. (2020; Zbl 1436.68092) Full Text: DOI
Taguchi, Y.-h. Unsupervised feature extraction applied to bioinformatics. A PCA based and TD based approach. (English) Zbl 07075656 Unsupervised and Semi-Supervised Learning. Cham: Springer (ISBN 978-3-030-22455-4/hbk; 978-3-030-22456-1/ebook). xviii, 321 p. (2020). Reviewer: Ludwig Paditz (Dresden) MSC: 62-02 62R07 62G10 62H25 62P10 68T05 PDF BibTeX XML Cite \textit{Y. h. Taguchi}, Unsupervised feature extraction applied to bioinformatics. A PCA based and TD based approach. Cham: Springer (2020; Zbl 07075656) Full Text: DOI
Liu, Shutian; Jiang, Yu’e; Lin, Jie A method for calculating the number of overlapped gene pairs based on Hadoop. (Chinese. English summary) Zbl 1449.92033 J. Fujian Norm. Univ., Nat. Sci. 35, No. 6, 29-39 (2019). MSC: 92D10 92-08 PDF BibTeX XML Cite \textit{S. Liu} et al., J. Fujian Norm. Univ., Nat. Sci. 35, No. 6, 29--39 (2019; Zbl 1449.92033) Full Text: DOI
Liu, Yang; Pelckmans, Kristiaan APTER: aggregated prognosis through exponential re-weighting. (English) Zbl 07172858 Du, Ding-Zhu (ed.) et al., Computing and combinatorics. 25th international conference, COCOON 2019, Xi’an, China, July 29–31, 2019. Proceedings. Cham: Springer (ISBN 978-3-030-26175-7/pbk; 978-3-030-26176-4/ebook). Lecture Notes in Computer Science 11653, 425-436 (2019). MSC: 68Rxx PDF BibTeX XML Cite \textit{Y. Liu} and \textit{K. Pelckmans}, Lect. Notes Comput. Sci. 11653, 425--436 (2019; Zbl 07172858) Full Text: DOI
Cazaux, Bastien; Lecroq, Thierry; Rivals, Eric Linking indexing data structures to de Bruijn graphs: construction and update. (English) Zbl 1423.68121 J. Comput. Syst. Sci. 104, 165-183 (2019). MSC: 68P05 68W40 92D20 PDF BibTeX XML Cite \textit{B. Cazaux} et al., J. Comput. Syst. Sci. 104, 165--183 (2019; Zbl 1423.68121) Full Text: DOI
Shi, Jifan; Zhao, Juan; Li, Tiejun; Chen, Luonan Detecting direct associations in a network by information theoretic approaches. (English) Zbl 1415.94365 Sci. China, Math. 62, No. 5, 823-838 (2019). MSC: 94A15 94A17 PDF BibTeX XML Cite \textit{J. Shi} et al., Sci. China, Math. 62, No. 5, 823--838 (2019; Zbl 1415.94365) Full Text: DOI
Saunders, Amanda M.; Ashlock, Daniel; Graether, Steffen P. Testing the rogue taxa hypothesis for clustering instability. (English) Zbl 1412.92226 J. Theor. Biol. 472, 36-45 (2019). MSC: 92D15 62P10 PDF BibTeX XML Cite \textit{A. M. Saunders} et al., J. Theor. Biol. 472, 36--45 (2019; Zbl 1412.92226) Full Text: DOI
Lafond, Manuel; Scornavacca, Celine On the weighted quartet consensus problem. (English) Zbl 1422.68085 Theor. Comput. Sci. 769, 1-17 (2019). MSC: 68Q17 68W20 68W25 92D15 PDF BibTeX XML Cite \textit{M. Lafond} and \textit{C. Scornavacca}, Theor. Comput. Sci. 769, 1--17 (2019; Zbl 1422.68085) Full Text: DOI
Małysiak-Mrozek, Bożena Uncertainty, imprecision, and many-valued logics in protein bioinformatics. (English) Zbl 1409.92087 Math. Biosci. 309, 143-162 (2019). MSC: 92C40 03E72 03B52 92-04 62P10 PDF BibTeX XML Cite \textit{B. Małysiak-Mrozek}, Math. Biosci. 309, 143--162 (2019; Zbl 1409.92087) Full Text: DOI
Randić, Milan Mathematical chemistry illustrations: a personal view of less known results. (English) Zbl 1406.92779 J. Math. Chem. 57, No. 1, 280-314 (2019). MSC: 92E10 92D20 05C90 PDF BibTeX XML Cite \textit{M. Randić}, J. Math. Chem. 57, No. 1, 280--314 (2019; Zbl 1406.92779) Full Text: DOI
Wang, Lizhi; Nikouei Mehr, Maryam An optimization approach to epistasis detection. (English) Zbl 1430.90436 Eur. J. Oper. Res. 274, No. 3, 1069-1076 (2019). MSC: 90C11 92D10 62J05 90C90 PDF BibTeX XML Cite \textit{L. Wang} and \textit{M. Nikouei Mehr}, Eur. J. Oper. Res. 274, No. 3, 1069--1076 (2019; Zbl 1430.90436) Full Text: DOI
Miklós, István Computational complexity of counting and sampling. (English) Zbl 1423.68010 Discrete Mathematics and its Applications. Boca Raton, FL: CRC Press (ISBN 978-1-138-03557-7/pbk; 978-1-138-07083-7/hbk; 978-1-315-26695-4/ebook). xvii, 390 p. (2019). Reviewer: Peter Sanders (Karlsruhe) MSC: 68-02 05Axx 68Q17 68Q25 68Q87 68R05 68W01 68W25 90C39 90C60 92-08 PDF BibTeX XML Cite \textit{I. Miklós}, Computational complexity of counting and sampling. Boca Raton, FL: CRC Press (2019; Zbl 1423.68010) Full Text: DOI
Frioux, Clémence; Schaub, Torsten; Schellhorn, Sebastian; Siegel, Anne; Wanko, Philipp Hybrid metabolic network completion. (English) Zbl 07107409 Theory Pract. Log. Program. 19, No. 1, 83-108 (2018). MSC: 68N17 PDF BibTeX XML Cite \textit{C. Frioux} et al., Theory Pract. Log. Program. 19, No. 1, 83--108 (2018; Zbl 07107409) Full Text: DOI
Yang, Li-Ping; Lu, Song-Feng; Li, Li Efficient quantum algorithm for similarity measures for molecules. (English) Zbl 1412.81111 Int. J. Theor. Phys. 57, No. 9, 2854-2862 (2018). MSC: 81P68 68Q12 92C40 92D20 62F10 PDF BibTeX XML Cite \textit{L.-P. Yang} et al., Int. J. Theor. Phys. 57, No. 9, 2854--2862 (2018; Zbl 1412.81111) Full Text: DOI
Yanev, Nicola; Traykov, Metodi; Milanov, Peter; Yurukov, Borislav A new classifier for protein fold class recognition. (English) Zbl 1438.92061 C. R. Acad. Bulg. Sci. 71, No. 7, 885-892 (2018). Reviewer: Angela Slavova (Sofia) MSC: 92D20 05B45 PDF BibTeX XML Cite \textit{N. Yanev} et al., C. R. Acad. Bulg. Sci. 71, No. 7, 885--892 (2018; Zbl 1438.92061)
Jung, Klaus Contribution to the discussion of “When should meta-analysis avoid making hidden normality assumptions?” Meta-analysis and normality assumptions in statistical bioinformatics. (English) Zbl 1412.62160 Biom. J. 60, No. 6, 1064-1065 (2018). MSC: 62P10 62A01 62H30 PDF BibTeX XML Cite \textit{K. Jung}, Biom. J. 60, No. 6, 1064--1065 (2018; Zbl 1412.62160) Full Text: DOI
Mrozek, Dariusz Scalable big data analytics for protein bioinformatics. Efficient computational solutions for protein structures. (English) Zbl 1411.92002 Computational Biology 28. Cham: Springer (ISBN 978-3-319-98838-2/hbk; 978-3-319-98839-9/ebook). xxvi, 315 p. (2018). Reviewer: Jasbir Kaur (Chennai) MSC: 92-02 92D20 62P10 68M11 PDF BibTeX XML Cite \textit{D. Mrozek}, Scalable big data analytics for protein bioinformatics. Efficient computational solutions for protein structures. Cham: Springer (2018; Zbl 1411.92002) Full Text: DOI
Corrêa, Leonardo de Lima; Borguesan, Bruno; Krause, Mathias J.; Dorn, Márcio Three-dimensional protein structure prediction based on memetic algorithms. (English) Zbl 1391.92005 Comput. Oper. Res. 91, 160-177 (2018). MSC: 92-08 92D20 90C26 90C59 PDF BibTeX XML Cite \textit{L. de L. Corrêa} et al., Comput. Oper. Res. 91, 160--177 (2018; Zbl 1391.92005) Full Text: DOI
Raja, Muhammad Asif Zahoor; Asma, Kiran; Aslam, Muhammad Saeed Bio-inspired computational heuristics to study models of HIV infection of \(\mathrm{CD}4^+\) T-cell. (English) Zbl 1384.92006 Int. J. Biomath. 11, No. 2, Article ID 1850019, 32 p. (2018). MSC: 92-08 92C50 92B20 65L05 PDF BibTeX XML Cite \textit{M. A. Z. Raja} et al., Int. J. Biomath. 11, No. 2, Article ID 1850019, 32 p. (2018; Zbl 1384.92006) Full Text: DOI
Filion, Guillaume J. Analytic combinatorics for computing seeding probabilities. (English) Zbl 07052081 Algorithms (Basel) 11, No. 1, Paper No. 3, 21 p. (2017). MSC: 68 90 PDF BibTeX XML Cite \textit{G. J. Filion}, Algorithms (Basel) 11, No. 1, Paper No. 3, 21 p. (2017; Zbl 07052081) Full Text: DOI
Bommert, Andrea; Rahnenführer, Jörg; Lang, Michel A multicriteria approach to find predictive and sparse models with stable feature selection for high-dimensional data. (English) Zbl 1397.92016 Comput. Math. Methods Med. 2017, Article ID 7907163, 18 p. (2017). MSC: 92B15 62P10 92D10 PDF BibTeX XML Cite \textit{A. Bommert} et al., Comput. Math. Methods Med. 2017, Article ID 7907163, 18 p. (2017; Zbl 1397.92016) Full Text: DOI
Álvarez-Miranda, Eduardo; Sinnl, Markus A relax-and-cut framework for large-scale maximum weight connected subgraph problems. (English) Zbl 1391.90595 Comput. Oper. Res. 87, 63-82 (2017). MSC: 90C35 90C10 92C42 PDF BibTeX XML Cite \textit{E. Álvarez-Miranda} and \textit{M. Sinnl}, Comput. Oper. Res. 87, 63--82 (2017; Zbl 1391.90595) Full Text: DOI
Álvarez-Miranda, Eduardo; Ljubić, Ivana; Luipersbeck, Martin; Sinnl, Markus Solving minimum-cost shared arborescence problems. (English) Zbl 1394.90429 Eur. J. Oper. Res. 258, No. 3, 887-901 (2017). MSC: 90C10 90C35 90B10 90C11 90C57 PDF BibTeX XML Cite \textit{E. Álvarez-Miranda} et al., Eur. J. Oper. Res. 258, No. 3, 887--901 (2017; Zbl 1394.90429) Full Text: DOI
Lin, Jie; Jiang, Yue; Harner, E. James; Jiang, Bing-Hua; Adjeroh, Don IDPM: an improved degenerate pattern matching algorithm for biological sequences. (English) Zbl 1387.68314 Int. J. Found. Comput. Sci. 28, No. 7, 889-914 (2017). MSC: 68W32 92D20 PDF BibTeX XML Cite \textit{J. Lin} et al., Int. J. Found. Comput. Sci. 28, No. 7, 889--914 (2017; Zbl 1387.68314) Full Text: DOI
Chopra, Sunil; Erdem, Ergin; Kim, Eunseok; Shim, Sangho Column generation approach to the convex recoloring problem on a tree. (English) Zbl 1380.05057 Takáč, Martin (ed.) et al., Modeling and optimization: theory and applications. MOPTA, Bethlehem, PA, USA, August 17–19, 2016. Selected contributions. Cham: Springer (ISBN 978-3-319-66615-0/hbk; 978-3-319-66616-7/ebook). Springer Proceedings in Mathematics & Statistics 213, 39-53 (2017). MSC: 05C15 90C05 90C27 PDF BibTeX XML Cite \textit{S. Chopra} et al., in: Modeling and optimization: theory and applications. MOPTA, Bethlehem, PA, USA, August 17--19, 2016. Selected contributions. Cham: Springer. 39--53 (2017; Zbl 1380.05057) Full Text: DOI
Nelson, S. L. Prince; Ramakrishnan, V.; Nietert, P. J.; Kamen, D. L.; Ramos, P. S.; Wolf, B. J. An evaluation of common methods for dichotomization of continuous variables to discriminate disease status. (English) Zbl 1379.62081 Commun. Stat., Theory Methods 46, No. 21, 10823-10834 (2017). MSC: 62P10 92B15 PDF BibTeX XML Cite \textit{S. L. P. Nelson} et al., Commun. Stat., Theory Methods 46, No. 21, 10823--10834 (2017; Zbl 1379.62081) Full Text: DOI
Hota, Malaya Kumar; Srivastava, Vinay Kumar A multirate DSP structure for the identification of protein-coding regions. (English) Zbl 1376.92039 Int. J. Biomath. 10, No. 8, Article ID 1750112, 15 p. (2017). MSC: 92D20 60G35 PDF BibTeX XML Cite \textit{M. K. Hota} and \textit{V. K. Srivastava}, Int. J. Biomath. 10, No. 8, Article ID 1750112, 15 p. (2017; Zbl 1376.92039) Full Text: DOI
Dehghani, Behzad; Ghasabi, Farzane; Hashempoor, Tayebeh; Joulaei, Hassan; Hasanshahi, Zahra; Halaji, Mehrdad; Chatrabnous, Nazanin; Mousavi, Zahra; Moayedi, Javad Functional and structural characterization of Ebola virus glycoprotein (1976–2015) – an in silico study. (English) Zbl 1376.92038 Int. J. Biomath. 10, No. 8, Article ID 1750108, 23 p. (2017). MSC: 92D20 92C40 92-08 PDF BibTeX XML Cite \textit{B. Dehghani} et al., Int. J. Biomath. 10, No. 8, Article ID 1750108, 23 p. (2017; Zbl 1376.92038) Full Text: DOI
Ferraro Petrillo, Umberto; Guerra, Concettina; Pizzi, Cinzia A new distributed alignment-free approach to compare whole proteomes. (English) Zbl 1380.68470 Theor. Comput. Sci. 698, 100-112 (2017). MSC: 68W32 92D15 92D20 PDF BibTeX XML Cite \textit{U. Ferraro Petrillo} et al., Theor. Comput. Sci. 698, 100--112 (2017; Zbl 1380.68470) Full Text: DOI
Strbenac, Dario Novel preprocessing approaches for omics data types and their performance evaluation. (Abstract of thesis). (English) Zbl 1376.62091 Bull. Aust. Math. Soc. 96, No. 2, 348-349 (2017). MSC: 62P10 68T05 92D20 PDF BibTeX XML Cite \textit{D. Strbenac}, Bull. Aust. Math. Soc. 96, No. 2, 348--349 (2017; Zbl 1376.62091) Full Text: DOI
Bourneuf, Lucas; Nicolas, Jacques FCA in a logical programming setting for visualization-oriented graph compression. (English) Zbl 06764347 Bertet, Karell (ed.) et al., Formal concept analysis. 14th international conference, ICFCA 2017, Rennes, France, June 13–16, 2017. Proceedings. Cham: Springer (ISBN 978-3-319-59270-1/pbk; 978-3-319-59271-8/ebook). Lecture Notes in Computer Science 10308. Lecture Notes in Artificial Intelligence, 89-105 (2017). MSC: 68T30 PDF BibTeX XML Cite \textit{L. Bourneuf} and \textit{J. Nicolas}, Lect. Notes Comput. Sci. 10308, 89--105 (2017; Zbl 06764347) Full Text: DOI
Rybarczyk, Agnieszka; Hertz, Alain; Kasprzak, Marta; Blazewicz, Jacek Tabu search for the RNA partial degradation problem. (English) Zbl 1367.92037 Int. J. Appl. Math. Comput. Sci. 27, No. 2, 401-415 (2017). MSC: 92C40 90C27 PDF BibTeX XML Cite \textit{A. Rybarczyk} et al., Int. J. Appl. Math. Comput. Sci. 27, No. 2, 401--415 (2017; Zbl 1367.92037) Full Text: DOI
Yang, Wenjing; Yang, Yuhong Toward an objective and reproducible model choice via variable selection deviation. (English) Zbl 1366.62247 Biometrics 73, No. 1, 20-30 (2017). MSC: 62P10 62J05 PDF BibTeX XML Cite \textit{W. Yang} and \textit{Y. Yang}, Biometrics 73, No. 1, 20--30 (2017; Zbl 1366.62247) Full Text: DOI
Jiang, Hao; Ching, Wai-Ki; Hou, Wenpin On orthogonal feature extraction model with applications in medical prognosis. (English) Zbl 07163047 Appl. Math. Modelling 40, No. 19-20, 8766-8776 (2016). MSC: 68 92 PDF BibTeX XML Cite \textit{H. Jiang} et al., Appl. Math. Modelling 40, No. 19--20, 8766--8776 (2016; Zbl 07163047) Full Text: DOI
Ağraz, Melih; Purutçuoğlu, Vilda Different types of Bernstein operators in inference of Gaussian graphical model. (English) Zbl 1438.92028 Cogent Math. 3, Article ID 1154706, 11 p. (2016). MSC: 92C42 41A36 62P10 PDF BibTeX XML Cite \textit{M. Ağraz} and \textit{V. Purutçuoğlu}, Cogent Math. 3, Article ID 1154706, 11 p. (2016; Zbl 1438.92028) Full Text: DOI
Phillips, J. C. Vaccine escape in 2013-4 and the hydropathic evolution of glycoproteins of A/H3N2 viruses. (English) Zbl 1400.92530 Physica A 455, 38-43 (2016). MSC: 92D30 92D15 PDF BibTeX XML Cite \textit{J. C. Phillips}, Physica A 455, 38--43 (2016; Zbl 1400.92530) Full Text: DOI
Jansson, Jesper; Sung, Wing-Kin Minimal phylogenetic supertrees and local consensus trees. (English) Zbl 1398.05063 Faliszewski, Piotr (ed.) et al., 41st international symposium on mathematical foundations of computer science, MFCS 2016, Kraków, Poland, August 22–26, 2016. Proceedings. Wadern: Schloss Dagstuhl – Leibniz Zentrum für Informatik (ISBN 978-3-95977-016-3). LIPIcs – Leibniz International Proceedings in Informatics 58, Article 53, 14 p. (2016). MSC: 05C05 05C85 68Q25 PDF BibTeX XML Cite \textit{J. Jansson} and \textit{W.-K. Sung}, LIPIcs -- Leibniz Int. Proc. Inform. 58, Article 53, 14 p. (2016; Zbl 1398.05063) Full Text: DOI
Navarro, Gonzalo; Ordóñez Pereira, Alberto Faster compressed suffix trees for repetitive collections. (English) Zbl 1365.68184 ACM J. Exp. Algorithm. 21, Article No. 1.8, 38 p. (2016). MSC: 68P05 68P30 PDF BibTeX XML Cite \textit{G. Navarro} and \textit{A. Ordóñez Pereira}, ACM J. Exp. Algorithm. 21, Article No. 1.8, 38 p. (2016; Zbl 1365.68184) Full Text: DOI
Angelopoulos, Nicos; Abdallah, Samer; Giamas, Georgios Advances in integrative statistics for logic programming. (English) Zbl 1386.68029 Int. J. Approx. Reasoning 78, 103-115 (2016). MSC: 68N17 62-04 PDF BibTeX XML Cite \textit{N. Angelopoulos} et al., Int. J. Approx. Reasoning 78, 103--115 (2016; Zbl 1386.68029) Full Text: DOI
Turkay, Metin; Felici, Giovanni; Szachniuk, Marta; Lukasiak, Piotr Recent advances in operations research in computational biology, bioinformatics and medicine. (English) Zbl 1358.92024 RAIRO, Oper. Res. 50, No. 2, 327-330 (2016). MSC: 92Cxx PDF BibTeX XML Cite \textit{M. Turkay} et al., RAIRO, Oper. Res. 50, No. 2, 327--330 (2016; Zbl 1358.92024) Full Text: DOI
Chikhi, Rayan; Medvedev, Paul; Milanič, Martin; Raskhodnikova, Sofya On the readability of overlap digraphs. (English) Zbl 1333.05134 Discrete Appl. Math. 205, 35-44 (2016). MSC: 05C20 05C90 PDF BibTeX XML Cite \textit{R. Chikhi} et al., Discrete Appl. Math. 205, 35--44 (2016; Zbl 1333.05134) Full Text: DOI
Blum, Christian; Raidl, Günther R. Computational performance evaluation of two integer linear programming models for the minimum common string partition problem. (English) Zbl 1339.90236 Optim. Lett. 10, No. 1, 189-205 (2016). MSC: 90C10 90C90 PDF BibTeX XML Cite \textit{C. Blum} and \textit{G. R. Raidl}, Optim. Lett. 10, No. 1, 189--205 (2016; Zbl 1339.90236) Full Text: DOI
Bixby, Eliot; Flint, Toby; Miklós, István Proving the pressing game conjecture on linear graphs. (English) Zbl 1328.05120 Involve 9, No. 1, 41-56 (2016). MSC: 05C57 91A43 60J10 05C76 PDF BibTeX XML Cite \textit{E. Bixby} et al., Involve 9, No. 1, 41--56 (2016; Zbl 1328.05120) Full Text: DOI arXiv
Kim, Sungsu; SenGupta, Ashis; Arnold, Barry C. A multivariate circular distribution with applications to the protein structure prediction problem. (English) Zbl 1331.62425 J. Multivariate Anal. 143, 374-382 (2016). MSC: 62P10 62H30 62J99 92D20 PDF BibTeX XML Cite \textit{S. Kim} et al., J. Multivariate Anal. 143, 374--382 (2016; Zbl 1331.62425) Full Text: DOI
Nunes, Luiz Fernando; Galvão, Lauro Cesar; Lopes, Heitor Silvério; Moscato, Pablo; Berretta, Regina An integer programming model for protein structure prediction using the 3D-HP side chain model. (English) Zbl 1336.92063 Discrete Appl. Math. 198, 206-214 (2016). Reviewer: Irina Ioana Mohorianu (Norwich) MSC: 92D20 90C10 PDF BibTeX XML Cite \textit{L. F. Nunes} et al., Discrete Appl. Math. 198, 206--214 (2016; Zbl 1336.92063) Full Text: DOI
El-Kebir, Mohammed; Heringa, Jaap; Klau, Gunnar W. Natalie 2.0: sparse global network alignment as a special case of quadratic assignment. (English) Zbl 07042299 Algorithms (Basel) 8, No. 4, 1035-1051 (2015). MSC: 92 90 PDF BibTeX XML Cite \textit{M. El-Kebir} et al., Algorithms (Basel) 8, No. 4, 1035--1051 (2015; Zbl 07042299) Full Text: DOI
Zhang, Wenlu; Li, Rongjian; Feng, Daming; Chernikov, Andrey; Chrisochoides, Nikos; Osgood, Christopher; Ji, Shuiwang Evolutionary soft co-clustering: formulations, algorithms, and applications. (English) Zbl 1405.62087 Data Min. Knowl. Discov. 29, No. 3, 765-791 (2015). MSC: 62H30 62M10 62P10 PDF BibTeX XML Cite \textit{W. Zhang} et al., Data Min. Knowl. Discov. 29, No. 3, 765--791 (2015; Zbl 1405.62087) Full Text: DOI
Urniaz, Rafał Damian Application of \(f\)RMSDchiral for mathematical description of mutual position between stereoisomers. (English) Zbl 1370.92058 Math. Appl. (Warsaw) 43, No. 1-2, 37-48 (2015). MSC: 92C40 62P10 92-08 92D20 62J05 PDF BibTeX XML Cite \textit{R. D. Urniaz}, Math. Appl. (Warsaw) 43, No. 1--2, 37--48 (2015; Zbl 1370.92058) Full Text: DOI
Fioretto, Ferdinando; Dovier, Agostino; Pontelli, Enrico Constrained community-based gene regulatory network inference. (English) Zbl 1369.92039 ACM Trans. Model. Comput. Simul. 25, No. 2, Article No. 11, 26 p. (2015). MSC: 92C42 62P10 92D10 PDF BibTeX XML Cite \textit{F. Fioretto} et al., ACM Trans. Model. Comput. Simul. 25, No. 2, Article No. 11, 26 p. (2015; Zbl 1369.92039) Full Text: DOI
Bhattacharyya, Malay; Bandyopadhyay, Sanghamitra Finding quasi core with simulated stacked neural networks. (English) Zbl 1360.05171 Inf. Sci. 294, 1-14 (2015). MSC: 05C90 05C22 68T20 92B20 PDF BibTeX XML Cite \textit{M. Bhattacharyya} and \textit{S. Bandyopadhyay}, Inf. Sci. 294, 1--14 (2015; Zbl 1360.05171) Full Text: DOI
Farbod, Davood On the estimators for some frequency distributions arising in bioinformatics. (English) Zbl 1356.62019 Bull. Georgian Natl. Acad. Sci. (N.S.) 9, No. 1, 44-50 (2015). MSC: 62E10 62F10 62P10 92C40 PDF BibTeX XML Cite \textit{D. Farbod}, Bull. Georgian Natl. Acad. Sci. (N.S.) 9, No. 1, 44--50 (2015; Zbl 1356.62019) Full Text: Link
Al-Neama, Mohammed W.; Reda, Naglaa M.; Ghaleb, Fayed F. M. Fast vectorized distance matrix computation for multiple sequence alignment on multi-cores. (English) Zbl 1336.92058 Int. J. Biomath. 8, No. 6, Article ID 1550084, 15 p. (2015). MSC: 92D20 92-08 68W10 PDF BibTeX XML Cite \textit{M. W. Al-Neama} et al., Int. J. Biomath. 8, No. 6, Article ID 1550084, 15 p. (2015; Zbl 1336.92058) Full Text: DOI
Sergienko, I. V.; Gupal, A. M.; Ostrovskiy, A. V. Using EM-algorithm for gene classification. (English. Russian original) Zbl 1327.93430 Cybern. Syst. Anal. 51, No. 1, 41-50 (2015); translation from Kibern. Sist. Anal. 2015, No. 1, 48-58 (2015). MSC: 93E25 92D10 68T10 PDF BibTeX XML Cite \textit{I. V. Sergienko} et al., Cybern. Syst. Anal. 51, No. 1, 41--50 (2015; Zbl 1327.93430); translation from Kibern. Sist. Anal. 2015, No. 1, 48--58 (2015) Full Text: DOI
Sergienko, I. V.; Gupal, A. M.; Ostrovskiy, A. V. Predicting gene structure with the use of mixtures of probability distributions. (English. Russian original) Zbl 1327.93360 Cybern. Syst. Anal. 51, No. 3, 361-369 (2015); translation from Kibern. Sist. Anal. 2015, No. 3, 44-53 (2015). MSC: 93E03 92D10 62J10 PDF BibTeX XML Cite \textit{I. V. Sergienko} et al., Cybern. Syst. Anal. 51, No. 3, 361--369 (2015; Zbl 1327.93360); translation from Kibern. Sist. Anal. 2015, No. 3, 44--53 (2015) Full Text: DOI
Indumathy, R.; Maheswari, S. Uma; Subashini, G. Nature-inspired novel Cuckoo search algorithm for genome sequence assembly. (English) Zbl 1322.90118 Sādhanā 40, No. 1, 1-14 (2015). MSC: 90C59 92D15 68W25 60G99 PDF BibTeX XML Cite \textit{R. Indumathy} et al., Sādhanā 40, No. 1, 1--14 (2015; Zbl 1322.90118) Full Text: DOI
Jansson, Jesper; Lingas, Andrzej; Lundell, Eva-Marta The approximability of maximum rooted triplets consistency with fan triplets and forbidden triplets. (English) Zbl 1432.68577 Cicalese, Ferdinando (ed.) et al., Combinatorial pattern matching. 26th annual symposium, CPM 2015, Ischia Island, Italy, June 29 – July 1, 2015. Proceedings. Cham: Springer. Lect. Notes Comput. Sci. 9133, 272-283 (2015). MSC: 68W25 92D15 PDF BibTeX XML Cite \textit{J. Jansson} et al., Lect. Notes Comput. Sci. 9133, 272--283 (2015; Zbl 1432.68577) Full Text: DOI
Kato, Shogo; Pewsey, Arthur A Möbius transformation-induced distribution on the torus. (English) Zbl 1452.62188 Biometrika 102, No. 2, 359-370 (2015). MSC: 62E15 62F10 62R40 62P10 PDF BibTeX XML Cite \textit{S. Kato} and \textit{A. Pewsey}, Biometrika 102, No. 2, 359--370 (2015; Zbl 1452.62188) Full Text: DOI
Nánási, Michal; Vinař, Tomáš; Brejová, Broňa Sequence annotation with HMMs: new problems and their complexity. (English) Zbl 1328.68096 Inf. Process. Lett. 115, No. 6-8, 635-639 (2015). MSC: 68Q25 68Q17 68Q87 92D10 PDF BibTeX XML Cite \textit{M. Nánási} et al., Inf. Process. Lett. 115, No. 6--8, 635--639 (2015; Zbl 1328.68096) Full Text: DOI
Chen, Qingfeng; Luo, Haiqiong; Zhang, Chengqi; Chen, Yi-Ping Phoebe Bioinformatics in protein kinases regulatory network and drug discovery. (English) Zbl 1315.92025 Math. Biosci. 262, 147-156 (2015). MSC: 92C40 92C42 PDF BibTeX XML Cite \textit{Q. Chen} et al., Math. Biosci. 262, 147--156 (2015; Zbl 1315.92025) Full Text: DOI
Nezafat, Navid; Ghasemi, Younes; Javadi, Gholamreza; Khoshnoud, Mohammad Javad; Omidinia, Eskandar A novel multi-epitope peptide vaccine against cancer: an in silico approach. (English) Zbl 1412.92157 J. Theor. Biol. 349, 121-134 (2014). MSC: 92C50 PDF BibTeX XML Cite \textit{N. Nezafat} et al., J. Theor. Biol. 349, 121--134 (2014; Zbl 1412.92157) Full Text: DOI
Soneson, Charlotte; Fontes, Magnus Incorporation of gene exchangeabilities improves the reproducibility of gene set rankings. (English) Zbl 06975409 Comput. Stat. Data Anal. 71, 588-598 (2014). MSC: 62 PDF BibTeX XML Cite \textit{C. Soneson} and \textit{M. Fontes}, Comput. Stat. Data Anal. 71, 588--598 (2014; Zbl 06975409) Full Text: DOI
Swiercz, Aleksandra; Burke, Edmund K.; Cichenski, Sanja; Zurkowski, Tomasz; Blazewicz, Jacek Unified encoding for hyper-heuristics with application to bioinformatics. (English) Zbl 1339.90342 CEJOR, Cent. Eur. J. Oper. Res. 22, No. 3, 567-589 (2014). MSC: 90C59 90C27 68W01 92D20 05C85 90C25 PDF BibTeX XML Cite \textit{A. Swiercz} et al., CEJOR, Cent. Eur. J. Oper. Res. 22, No. 3, 567--589 (2014; Zbl 1339.90342) Full Text: DOI
Zok, Tomasz; Popenda, Mariusz; Szachniuk, Marta MCQ4Structures to compute similarity of molecule structures. (English) Zbl 1339.92005 CEJOR, Cent. Eur. J. Oper. Res. 22, No. 3, 457-473 (2014). MSC: 92-04 92E10 92D20 PDF BibTeX XML Cite \textit{T. Zok} et al., CEJOR, Cent. Eur. J. Oper. Res. 22, No. 3, 457--473 (2014; Zbl 1339.92005) Full Text: DOI
Masciari, E.; Mazzeo, G. M.; Zaniolo, C. Analysing microarray expression data through effective clustering. (English) Zbl 1329.62286 Inf. Sci. 262, 32-45 (2014). MSC: 62H30 62P10 PDF BibTeX XML Cite \textit{E. Masciari} et al., Inf. Sci. 262, 32--45 (2014; Zbl 1329.62286) Full Text: DOI
Hudson, Cody; Chen, Bernard; Che, Dongsheng Hierarchically clustered HMM for protein sequence motif extraction with variable length. (English) Zbl 1340.92037 Tsinghua Sci. Technol. 19, No. 6, 635-647 (2014). MSC: 92D20 92B15 62P10 PDF BibTeX XML Cite \textit{C. Hudson} et al., Tsinghua Sci. Technol. 19, No. 6, 635--647 (2014; Zbl 1340.92037) Full Text: DOI
Althaus, Ernst; Blumenstock, Markus; Disterhoft, Alexej; Hildebrandt, Andreas; Krupp, Markus Algorithms for the maximum weight connected \(k\)-induced subgraph problem. (English) Zbl 1431.90159 Zhang, Zhao (ed.) et al., Combinatorial optimization and applications. 8th international conference, COCOA 2014, Wailea, Maui, HI, USA, December 19–21, 2014. Proceedings. Cham: Springer. Lect. Notes Comput. Sci. 8881, 268-282 (2014). MSC: 90C35 90C10 PDF BibTeX XML Cite \textit{E. Althaus} et al., Lect. Notes Comput. Sci. 8881, 268--282 (2014; Zbl 1431.90159) Full Text: DOI
Zomorrodi, Ali R.; Maranas, Costas D. Coarse-grained optimization-driven design and piecewise linear modeling of synthetic genetic circuits. (English) Zbl 1304.90135 Eur. J. Oper. Res. 237, No. 2, 665-676 (2014). MSC: 90B90 92D10 34C60 90C10 PDF BibTeX XML Cite \textit{A. R. Zomorrodi} and \textit{C. D. Maranas}, Eur. J. Oper. Res. 237, No. 2, 665--676 (2014; Zbl 1304.90135) Full Text: DOI
Daskin, Anmer; Grama, Ananth; Kais, Sabre Multiple network alignment on quantum computers. (English) Zbl 1305.81050 Quantum Inf. Process. 13, No. 12, 2653-2666 (2014). MSC: 81P68 92C40 91D30 92C42 94C15 PDF BibTeX XML Cite \textit{A. Daskin} et al., Quantum Inf. Process. 13, No. 12, 2653--2666 (2014; Zbl 1305.81050) Full Text: DOI
Bieniasz-Krzywiec, Ł.; Cytowski, M.; Rychlewski, L.; Plewczynski, D. 3D-hit: fast structural comparison of proteins on multicore architectures. (English) Zbl 1322.92050 Optim. Lett. 8, No. 5, 1783-1794 (2014). MSC: 92D20 92-08 PDF BibTeX XML Cite \textit{Ł. Bieniasz-Krzywiec} et al., Optim. Lett. 8, No. 5, 1783--1794 (2014; Zbl 1322.92050) Full Text: DOI
Jung, Sungkyu; Qiao, Xingye A statistical approach to set classification by feature selection with applications to classification of histopathology images. (English) Zbl 1299.62124 Biometrics 70, No. 3, 536-545 (2014). MSC: 62P10 92C55 94A08 PDF BibTeX XML Cite \textit{S. Jung} and \textit{X. Qiao}, Biometrics 70, No. 3, 536--545 (2014; Zbl 1299.62124) Full Text: DOI
Pappalardo, Elisa; Cantone, Domenico; Pardalos, Panos M. A combined greedy-walk heuristic and simulated annealing approach for the closest string problem. (English) Zbl 1305.90307 Optim. Methods Softw. 29, No. 4, 673-702 (2014). MSC: 90C10 90C59 90C90 PDF BibTeX XML Cite \textit{E. Pappalardo} et al., Optim. Methods Softw. 29, No. 4, 673--702 (2014; Zbl 1305.90307) Full Text: DOI
Caserta, Marco; Voß, Stefan A hybrid algorithm for the DNA sequencing problem. (English) Zbl 1352.92110 Discrete Appl. Math. 163, Part 1, 87-99 (2014). MSC: 92D20 90C10 90C59 PDF BibTeX XML Cite \textit{M. Caserta} and \textit{S. Voß}, Discrete Appl. Math. 163, Part 1, 87--99 (2014; Zbl 1352.92110) Full Text: DOI
Brodag, Thomas; Herbold, Steffen; Waack, Stephan A generalized model of PAC learning and its applicability. (English) Zbl 1366.68231 RAIRO, Theor. Inform. Appl. 48, No. 2, 209-245 (2014). MSC: 68T05 62P10 68N30 92-08 PDF BibTeX XML Cite \textit{T. Brodag} et al., RAIRO, Theor. Inform. Appl. 48, No. 2, 209--245 (2014; Zbl 1366.68231) Full Text: DOI
Coste, François; Garet, Gaëlle; Groisillier, Agnès; Nicolas, Jacques; Tonon, Thierry Automated enzyme classification by formal concept analysis. (English) Zbl 1444.68202 Glodeanu, Cynthia Vera (ed.) et al., Formal concept analysis. 12th international conference, ICFCA 2014, Cluj-Napoca, Romania, June 10–13, 2014. Proceedings. Berlin: Springer. Lect. Notes Comput. Sci. 8478, 235-250 (2014). MSC: 68T30 92-08 92D20 PDF BibTeX XML Cite \textit{F. Coste} et al., Lect. Notes Comput. Sci. 8478, 235--250 (2014; Zbl 1444.68202) Full Text: DOI
Allouche, David; André, Isabelle; Barbe, Sophie; Davies, Jessica; de Givry, Simon; Katsirelos, George; O’Sullivan, Barry; Prestwich, Steve; Schiex, Thomas; Traoré, Seydou Computational protein design as an optimization problem. (English) Zbl 1407.92099 Artif. Intell. 212, 59-79 (2014). MSC: 92D20 68T20 90C10 90C20 PDF BibTeX XML Cite \textit{D. Allouche} et al., Artif. Intell. 212, 59--79 (2014; Zbl 1407.92099) Full Text: DOI
Mardia, Kanti V.; Voss, Jochen Some fundamental properties of a multivariate von Mises distribution. (English) Zbl 06301879 Commun. Stat., Theory Methods 43, No. 6, 1132-1144 (2014). MSC: 62H11 62H05 62P99 62P10 PDF BibTeX XML Cite \textit{K. V. Mardia} and \textit{J. Voss}, Commun. Stat., Theory Methods 43, No. 6, 1132--1144 (2014; Zbl 06301879) Full Text: DOI arXiv
Dondi, Riccardo; El-Mabrouk, Nadia; Swenson, Krister M. Gene tree correction for reconciliation and species tree inference: complexity and algorithms. (English) Zbl 1284.68694 J. Discrete Algorithms 25, 51-65 (2014). MSC: 68W32 92D20 68Q17 PDF BibTeX XML Cite \textit{R. Dondi} et al., J. Discrete Algorithms 25, 51--65 (2014; Zbl 1284.68694) Full Text: DOI
Fischer, A.; Fischer, F.; Jäger, G.; Keilwagen, J.; Molitor, P.; Grosse, I. Exact algorithms and heuristics for the quadratic traveling salesman problem with an application in bioinformatics. (English) Zbl 1288.90074 Discrete Appl. Math. 166, 97-114 (2014). MSC: 90C27 90C90 PDF BibTeX XML Cite \textit{A. Fischer} et al., Discrete Appl. Math. 166, 97--114 (2014; Zbl 1288.90074) Full Text: DOI
Cope, Leslie; Naiman, Daniel Q.; Parmigiani, Giovanni Integrative correlation: properties and relation to canonical correlations. (English) Zbl 1278.62087 J. Multivariate Anal. 123, 270-280 (2014). MSC: 62H20 62P10 62E10 PDF BibTeX XML Cite \textit{L. Cope} et al., J. Multivariate Anal. 123, 270--280 (2014; Zbl 1278.62087) Full Text: DOI
Abeliuk, Andrés; Cánovas, Rodrigo; Navarro, Gonzalo Practical compressed suffix trees. (English) Zbl 07042163 Algorithms (Basel) 6, No. 2, 319-351 (2013). MSC: 68 05 PDF BibTeX XML Cite \textit{A. Abeliuk} et al., Algorithms (Basel) 6, No. 2, 319--351 (2013; Zbl 07042163) Full Text: DOI
Gullotto, Danilo; Nolassi, Mario Salvatore; Bernini, Andrea; Spiga, Ottavia; Niccolai, Neri Probing the protein space for extending the detection of weak homology folds. (English) Zbl 1406.92456 J. Theor. Biol. 320, 152-158 (2013). MSC: 92D20 PDF BibTeX XML Cite \textit{D. Gullotto} et al., J. Theor. Biol. 320, 152--158 (2013; Zbl 1406.92456) Full Text: DOI
Fox, Geoffrey Robust scalable visualized clustering in vector and non vector semi-metric spaces. (English) Zbl 1327.68190 Parallel Process. Lett. 23, No. 2, Article ID 1340006, 15 p. (2013). MSC: 68T05 62H30 68W10 92-08 PDF BibTeX XML Cite \textit{G. Fox}, Parallel Process. Lett. 23, No. 2, Article ID 1340006, 15 p. (2013; Zbl 1327.68190) Full Text: DOI
Ohlebusch, Enno Bioinformatics algorithms. Sequence analysis, genome rearrangements, and phylogenetic reconstruction. (English) Zbl 1295.92011 Bremen: Oldenbusch Verlag; Ulm: Enno Ohlebusch (ISBN 978-3-00-041316-2/hbk). xvi, 604 p. (2013). Reviewer: Irina Ioana Mohorianu (Norwich) MSC: 92-02 92-08 92D20 92B05 92D10 92D15 68W32 PDF BibTeX XML Cite \textit{E. Ohlebusch}, Bioinformatics algorithms. Sequence analysis, genome rearrangements, and phylogenetic reconstruction. Bremen: Oldenbusch Verlag; Ulm: Enno Ohlebusch (2013; Zbl 1295.92011)
Burton, Benjamin A.; Hiron, Mathias Locating regions in a sequence under density constraints. (English) Zbl 1272.68479 SIAM J. Comput. 42, No. 3, 1201-1215 (2013). MSC: 68W32 92D20 PDF BibTeX XML Cite \textit{B. A. Burton} and \textit{M. Hiron}, SIAM J. Comput. 42, No. 3, 1201--1215 (2013; Zbl 1272.68479) Full Text: DOI
Jiang, Minghui Recognizing \(d\)-interval graphs and \(d\)-track interval graphs. (English) Zbl 1267.68121 Algorithmica 66, No. 3, 541-563 (2013). MSC: 68Q17 68R10 PDF BibTeX XML Cite \textit{M. Jiang}, Algorithmica 66, No. 3, 541--563 (2013; Zbl 1267.68121) Full Text: DOI
Manca, Vincenzo Infobiotics. Information in biotic systems. (English) Zbl 1278.68017 Emergence, Complexity and Computation 3. Berlin: Springer (ISBN 978-3-642-36222-4/hbk; 978-3-642-36223-1/ebook). xviii, 384 p. (2013). Reviewer: Göran Broström (Umea) MSC: 68-02 92B05 92D10 92-02 05C90 05-01 PDF BibTeX XML Cite \textit{V. Manca}, Infobiotics. Information in biotic systems. Berlin: Springer (2013; Zbl 1278.68017) Full Text: DOI
Tseng, Chiou-Ting; Yang, Chang-Biau; Ann, Hsing-Yen Efficient algorithms for the longest common subsequence problem with sequential substring constraints. (English) Zbl 1255.90107 J. Complexity 29, No. 1, 44-52 (2013). MSC: 90C27 68R15 68T10 90C60 PDF BibTeX XML Cite \textit{C.-T. Tseng} et al., J. Complexity 29, No. 1, 44--52 (2013; Zbl 1255.90107) Full Text: DOI
Wang, Yongcui; Ren, Xianwen; Zhang, Chunhua; Deng, Naiyang; Zhang, Xiangsun Interrogating noise in protein sequences from the perspective of protein-protein interactions prediction. (English) Zbl 1397.92544 J. Theor. Biol. 315, 64-70 (2012). MSC: 92D20 92C40 PDF BibTeX XML Cite \textit{Y. Wang} et al., J. Theor. Biol. 315, 64--70 (2012; Zbl 1397.92544) Full Text: DOI
Rahbar, Mohammad Reza; Rasooli, Iraj; Gargari, Seyed Latif Mousavi; Sandstrom, Gunnar; Amani, Jafar; Fattahian, Yaser; Jahangiri, Abolfazl; Jalali, Marziyeh A potential in silico antibody-antigen based diagnostic test for precise identification of Acinetobacter baumannii. (English) Zbl 1397.92356 J. Theor. Biol. 294, 29-39 (2012). MSC: 92C50 92-08 PDF BibTeX XML Cite \textit{M. R. Rahbar} et al., J. Theor. Biol. 294, 29--39 (2012; Zbl 1397.92356) Full Text: DOI
Pirim, Harun; Ekåioälu, Burak; Perkins, Andy D.; Yüceer, Çetin Clustering of high throughput gene expression data. (English) Zbl 1349.62554 Comput. Oper. Res. 39, No. 12, 3046-3061 (2012). MSC: 62P10 62H30 92D10 PDF BibTeX XML Cite \textit{H. Pirim} et al., Comput. Oper. Res. 39, No. 12, 3046--3061 (2012; Zbl 1349.62554) Full Text: DOI
Magombedze, Gesham; Mulder, Nicola A mathematical representation of the development of Mycobacterium tuberculosis active, latent and dormant stages. (English) Zbl 1307.92084 J. Theor. Biol. 292, 44-59 (2012). MSC: 92C40 92D30 92D10 PDF BibTeX XML Cite \textit{G. Magombedze} and \textit{N. Mulder}, J. Theor. Biol. 292, 44--59 (2012; Zbl 1307.92084) Full Text: DOI
Giancarlo, R.; Scaturro, D.; Utro, F. Textual data compression in computational biology: algorithmic techniques. (English) Zbl 1298.68087 Comput. Sci. Rev. 6, No. 1, 1-25 (2012). MSC: 68P30 68P15 68T10 68T05 68Q30 92D20 68-02 92-08 PDF BibTeX XML Cite \textit{R. Giancarlo} et al., Comput. Sci. Rev. 6, No. 1, 1--25 (2012; Zbl 1298.68087) Full Text: DOI
Shehu, Amarda; Kavraki, Lydia E. Modeling structures and motions of loops in protein molecules. (English) Zbl 1303.92034 Entropy 14, No. 2, 252-290 (2012). MSC: 92C40 PDF BibTeX XML Cite \textit{A. Shehu} and \textit{L. E. Kavraki}, Entropy 14, No. 2, 252--290 (2012; Zbl 1303.92034) Full Text: DOI
Subpaiboonkit, Sitthichoke; Thammarongtham, Chinae; Chaijaruwanich, Jeerayut RNA family classification using the conditional random fields model. (English) Zbl 1310.92042 Chiang Mai J. Sci. 39, No. 1, 1-7 (2012). MSC: 92D20 PDF BibTeX XML Cite \textit{S. Subpaiboonkit} et al., Chiang Mai J. Sci. 39, No. 1, 1--7 (2012; Zbl 1310.92042)