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Song, Yun S.

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Author ID: song.yun-s Recent zbMATH articles by "Song, Yun S."
Published as: Song, Yun S.; Song, Jun S.
Homepage: https://statistics.berkeley.edu/people/yun-song
Documents Indexed: 29 Publications since 2000

Publications by Year

Citations contained in zbMATH Open

25 Publications have been cited 110 times in 87 Documents Cited by Year
An explicit transition density expansion for a multi-allelic Wright-Fisher diffusion with general diploid selection. Zbl 1275.92090
Steinrücken, Matthias; Wang, Y. X. Rachel; Song, Yun S.
10
2013
Open string instantons and relative stable morphisms. Zbl 1015.14026
Li, Jun; Song, Yun S.
9
2001
Importance sampling and the two-locus model with subdivided population structure. Zbl 1144.62092
Griffiths, Robert C.; Jenkins, Paul A.; Song, Yun S.
8
2008
The effect of recurrent mutation on the frequency spectrum of a segregating site and the age of an allele. Zbl 1297.92054
Jenkins, Paul A.; Song, Yun S.
7
2011
On the combinatorics of rooted binary phylogenetic trees. Zbl 1045.05031
Song, Yun S.
7
2003
The Hurwitz enumeration problem of branched covers and Hodge integrals. Zbl 1077.14078
Monni, Stefano; Song, Jun S.; Song, Yun S.
7
2004
A novel spectral method for inferring general diploid selection from time series genetic data. Zbl 1454.62405
Steinrücken, Matthias; Bhaskar, Anand; Song, Yun S.
6
2014
Descartes’ rule of signs and the identifiability of population demographic models from genomic variation data. Zbl 1305.62027
Bhaskar, Anand; Song, Yun S.
5
2014
Operator norm inequalities between tensor unfoldings on the partition lattice. Zbl 1359.15014
Wang, Miaoyan; Duc, Khanh Dao; Fischer, Jonathan; Song, Yun S.
5
2017
An asymptotic sampling formula for the coalescent with recombination. Zbl 1193.92077
Jenkins, Paul A.; Song, Yun S.
5
2010
Closed-form asymptotic sampling distributions under the coalescent with recombination for an arbitrary number of loci. Zbl 1241.92054
Bhaskar, Anand; Song, Yun S.
4
2012
On the minimum number of recombination events in the evolutionary history of DNA sequences. Zbl 1063.92041
Song, Yun S.; Hein, Jotun
4
2004
A graphical approach to multi-locus match probability computation: Revisiting the product rule. Zbl 1123.92021
Song, Yun S.; Slatkin, Montgomery
4
2007
Analytic computation of the expectation of the linkage disequilibrium coefficient \(r^2\). Zbl 1118.92038
Song, Yun S.; Song, Jun S.
4
2007
Properties of subtree-prune-and-regraft operations on totally-ordered phylogenetic trees. Zbl 1092.05015
Song, Yun S.
4
2006
Padé approximants and exact two-locus sampling distributions. Zbl 1242.65017
Jenkins, Paul A.; Song, Yun S.
3
2012
A sequentially Markov conditional sampling distribution for structured populations with migration and recombination. Zbl 1296.92170
Steinrücken, Matthias; Paul, Joshua S.; Song, Yun S.
3
2013
Approximate sampling formulae for general finite-alleles models of mutation. Zbl 1241.92053
Bhaskar, Anand; Kamm, John A.; Song, Yun S.
3
2012
Three-dimensional Gorenstein singularities and \(\widehat{\text{SU}(3)}\) modular invariants. Zbl 1011.81036
Song, Jun S.
3
2000
On a conjecture of Givental. Zbl 1064.14065
Song, Jun S.; Song, Yun S.
3
2004
Algorithms to distinguish the role of gene-conversion from single-crossover recombination in the derivation of SNP sequences in populations. Zbl 1225.92016
Song, Yun S.; Ding, Zhihong; Gusfield, Dan; Langley, Charles H.; Wu, Yufeng
2
2006
A sufficient condition for reducing recursions in hidden Markov models. Zbl 1334.60151
Song, Yun S.
1
2006
Open string instantons and relative stable morphisms. Zbl 1107.14303
Li, Jun; Song, Yun S.
1
2006
Tractable diffusion and coalescent processes for weakly correlated loci. Zbl 1332.92041
Jenkins, Paul A.; Fearnhead, Paul; Song, Yun S.
1
2015
Three-way clustering of multi-tissue multi-individual gene expression data using semi-nonnegative tensor decomposition. Zbl 1423.62152
Wang, Miaoyan; Fischer, Jonathan; Song, Yun S.
1
2019
Three-way clustering of multi-tissue multi-individual gene expression data using semi-nonnegative tensor decomposition. Zbl 1423.62152
Wang, Miaoyan; Fischer, Jonathan; Song, Yun S.
1
2019
Operator norm inequalities between tensor unfoldings on the partition lattice. Zbl 1359.15014
Wang, Miaoyan; Duc, Khanh Dao; Fischer, Jonathan; Song, Yun S.
5
2017
Tractable diffusion and coalescent processes for weakly correlated loci. Zbl 1332.92041
Jenkins, Paul A.; Fearnhead, Paul; Song, Yun S.
1
2015
A novel spectral method for inferring general diploid selection from time series genetic data. Zbl 1454.62405
Steinrücken, Matthias; Bhaskar, Anand; Song, Yun S.
6
2014
Descartes’ rule of signs and the identifiability of population demographic models from genomic variation data. Zbl 1305.62027
Bhaskar, Anand; Song, Yun S.
5
2014
An explicit transition density expansion for a multi-allelic Wright-Fisher diffusion with general diploid selection. Zbl 1275.92090
Steinrücken, Matthias; Wang, Y. X. Rachel; Song, Yun S.
10
2013
A sequentially Markov conditional sampling distribution for structured populations with migration and recombination. Zbl 1296.92170
Steinrücken, Matthias; Paul, Joshua S.; Song, Yun S.
3
2013
Closed-form asymptotic sampling distributions under the coalescent with recombination for an arbitrary number of loci. Zbl 1241.92054
Bhaskar, Anand; Song, Yun S.
4
2012
Padé approximants and exact two-locus sampling distributions. Zbl 1242.65017
Jenkins, Paul A.; Song, Yun S.
3
2012
Approximate sampling formulae for general finite-alleles models of mutation. Zbl 1241.92053
Bhaskar, Anand; Kamm, John A.; Song, Yun S.
3
2012
The effect of recurrent mutation on the frequency spectrum of a segregating site and the age of an allele. Zbl 1297.92054
Jenkins, Paul A.; Song, Yun S.
7
2011
An asymptotic sampling formula for the coalescent with recombination. Zbl 1193.92077
Jenkins, Paul A.; Song, Yun S.
5
2010
Importance sampling and the two-locus model with subdivided population structure. Zbl 1144.62092
Griffiths, Robert C.; Jenkins, Paul A.; Song, Yun S.
8
2008
A graphical approach to multi-locus match probability computation: Revisiting the product rule. Zbl 1123.92021
Song, Yun S.; Slatkin, Montgomery
4
2007
Analytic computation of the expectation of the linkage disequilibrium coefficient \(r^2\). Zbl 1118.92038
Song, Yun S.; Song, Jun S.
4
2007
Properties of subtree-prune-and-regraft operations on totally-ordered phylogenetic trees. Zbl 1092.05015
Song, Yun S.
4
2006
Algorithms to distinguish the role of gene-conversion from single-crossover recombination in the derivation of SNP sequences in populations. Zbl 1225.92016
Song, Yun S.; Ding, Zhihong; Gusfield, Dan; Langley, Charles H.; Wu, Yufeng
2
2006
A sufficient condition for reducing recursions in hidden Markov models. Zbl 1334.60151
Song, Yun S.
1
2006
Open string instantons and relative stable morphisms. Zbl 1107.14303
Li, Jun; Song, Yun S.
1
2006
The Hurwitz enumeration problem of branched covers and Hodge integrals. Zbl 1077.14078
Monni, Stefano; Song, Jun S.; Song, Yun S.
7
2004
On the minimum number of recombination events in the evolutionary history of DNA sequences. Zbl 1063.92041
Song, Yun S.; Hein, Jotun
4
2004
On a conjecture of Givental. Zbl 1064.14065
Song, Jun S.; Song, Yun S.
3
2004
On the combinatorics of rooted binary phylogenetic trees. Zbl 1045.05031
Song, Yun S.
7
2003
Open string instantons and relative stable morphisms. Zbl 1015.14026
Li, Jun; Song, Yun S.
9
2001
Three-dimensional Gorenstein singularities and \(\widehat{\text{SU}(3)}\) modular invariants. Zbl 1011.81036
Song, Jun S.
3
2000
all top 5

Cited by 154 Authors

9 Song, Yun S.
6 Jenkins, Paul A.
5 Petronio, Carlo
4 Wakeley, John
3 Bakosi, Jozsef
3 Bhaskar, Anand
3 Griffiths, Robert C.
3 Gusfield, Dan
3 Ristorcelli, J. Raymond
2 Baake, Ellen
2 Brini, Andrea
2 Ferretti, Luca
2 Grünewald, Stefan
2 Humphries, Peter J.
2 Jockers, Hans
2 Klassmann, Alexander
2 Klemm, Albrecht
2 Koskela, Jere
2 Li, Zhening
2 Malaspinas, Anna-Sapfo
2 Pascali, Maria Antonietta
2 Ross, Nathan
2 Slatkin, Montgomery
2 Soroush, Masoud
2 Spanò, Dario
2 Steinrücken, Matthias
2 Wang, Miaoyan
2 Zhou, Jian
1 Achaz, Guillaume
1 Aharony, Ofer
1 Alberti, Frederic
1 Alexandrov, Alexander Sergeevich
1 Baharian, Soheil
1 Balding, David Joseph
1 Baroni, Mihaela Carmen
1 Bender, Christian
1 Bergman, Juraj
1 Beskos, Alexandros
1 Boitard, Simon
1 Bouchard-Côté, Alexandre
1 Bryan, Jim
1 Burden, Conrad John
1 Buzbas, Erkan Ozge
1 Carmi, Shai
1 Cavalieri, Renzo
1 Chen, Bilian
1 Chikhi, Lounès
1 De Iorio, Maria
1 De Oliveira Martins, Leonardo
1 Diaconescu, Duiliu-Emanuel
1 Ding, Yang
1 Dunin-Barkovskiĭ, Petr Igorevich
1 Durbin, Richard
1 Eddhu, Satish
1 Epstein, Charles Lawrence
1 Esser, Mareike
1 Evans, Steven Neil
1 Fang, Bohan
1 Favaro, Stefano
1 Feldman, Andrey
1 Feng, Shui
1 Ferguson, Jake M.
1 Fewster, Rachel M.
1 Fischer, Jonathan
1 Florea, Bogdan
1 Futschik, Andreas
1 Gan, Han L.
1 Goodman, Jesse
1 Gory, Jeffrey J.
1 Gravel, Simon
1 Green, Peter J.
1 Grusea, Simona
1 Gu, Jie
1 Guillin, Arnaud
1 Hasić, Damir
1 Herbei, Radu
1 Hickerson, Dean R.
1 Hobolth, Asger
1 Honda, Masazumi
1 Illingworth, Christopher J. R.
1 Jabot, Franck
1 Janssen, Remie
1 Jasra, Ajay
1 Jones, Danielle
1 Kamm, Jack
1 Kamm, John A.
1 Kelk, Steven
1 Kim, Junhyong
1 King, Léandra
1 Kishino, Hirohisa
1 Klawitter, Jonathan
1 Kosiol, Carolin
1 Kubatko, Laura Salter
1 Lambert, Amaury
1 Lessard, Sabin
1 Letter, I.
1 Li, Gen
1 Li, Lexin
1 Liu, Chiu-Chu Melissa
1 Ma, Yi
...and 54 more Authors
all top 5

Cited in 49 Serials

18 Theoretical Population Biology
7 Journal of Mathematical Biology
4 Communications in Mathematical Physics
4 The Annals of Applied Statistics
3 Advances in Applied Probability
2 Letters in Mathematical Physics
2 The Annals of Applied Probability
2 Journal of Combinatorial Optimization
2 Journal of Graph Algorithms and Applications
2 Statistical Applications in Genetics and Molecular Biology
2 International Journal of Stochastic Analysis
2 Journal of Theoretical Biology
1 Discrete Applied Mathematics
1 Journal of Mathematical Physics
1 Reviews of Modern Physics
1 Theoretical and Mathematical Physics
1 Bulletin of Mathematical Biology
1 Annals of the Institute of Statistical Mathematics
1 Annali di Matematica Pura ed Applicata. Serie Quarta
1 Calcolo
1 Duke Mathematical Journal
1 Journal of the American Statistical Association
1 Journal of Applied Probability
1 Journal of Combinatorial Theory. Series A
1 Journal of Computer and System Sciences
1 Journal für die Reine und Angewandte Mathematik
1 Proceedings of the American Mathematical Society
1 Theoretical Computer Science
1 Transactions of the American Mathematical Society
1 European Journal of Combinatorics
1 Stochastic Analysis and Applications
1 Algorithmica
1 SIAM Journal on Applied Mathematics
1 Annales de l’Institut Henri Poincaré. Probabilités et Statistiques
1 Computational Statistics and Data Analysis
1 SIAM Journal on Optimization
1 Computational Optimization and Applications
1 Documenta Mathematica
1 Geometry & Topology
1 Annals of Combinatorics
1 Acta Mathematica Sinica. English Series
1 Journal of High Energy Physics
1 Advances in Geometry
1 Algebraic & Geometric Topology
1 Journal of the Australian Mathematical Society
1 Journal of Machine Learning Research (JMLR)
1 International Journal of Biomathematics
1 Statistics and Computing
1 Proceedings of the Royal Society of London. A. Mathematical, Physical and Engineering Sciences

Citations by Year