Edit Profile (opens in new tab) Ji, Yuan Co-Author Distance Author ID: ji.yuan Published as: Ji, Yuan; Ji, Y. Documents Indexed: 51 Publications since 2001 Co-Authors: 67 Co-Authors with 47 Joint Publications 1,571 Co-Co-Authors all top 5 Co-Authors 0 single-authored 25 Müller, Peter 6 Mitra, Riten 5 Lee, Juhee 5 Ni, Yang 5 Tsui, Kam-Wah 5 Zhu, Yitan 4 Gulukota, Kamalakar 4 Sengupta, Subhajit 4 Xu, Yanxun 4 Zhou, Tianjian 3 Baladandayuthapani, Veerabhadran 3 Bekele, B. Nebiyou 3 Li, Yisheng 3 Li, Zhengguo 3 Liang, Shoudan 3 Lu, Yiling 3 Nieto-Barajas, Luis E. 3 Wen, Changyun 3 Yin, Guosheng 3 Yuan, Yuan 2 Hu, Jiaxin 2 Mills, Gordon B. 2 Talluri, Rajesh 2 Thall, Peter F. 2 Wen, Zhiying 2 Yang, Shengjie 2 Zuanetti, Daiane Aparecida 1 Ammoura, Ayman 1 Arap, Wadih 1 Catenacci, Daniel V. T. 1 Chen, Weiru 1 Cook, Malcolm J. 1 Coombes, Kevin R. 1 Davies, Michael A. 1 Diesendruck, Maurice 1 Do, Kim-Anh 1 Duan, Yunshan 1 Feng, De-Jun 1 Guo, Jiaojiao 1 Guo, Wentian 1 Hennessy, Bryan T. 1 Hu, Bo 1 Hua, Su 1 Jin, Dongping 1 Kaye, N. B. 1 Kim, KyungMann 1 Kolonin, Mikhail G. 1 Kornblau, Steven M. 1 Li, Xinyuan 1 Liang, Han 1 Liu, Fushou 1 Lu, Weiyang 1 Mallick, Bani K. 1 Morris, Jeffrey S. 1 Norris, Clift jun. 1 Pagani Zanini, Carlos Tadeu 1 Pasqualini, Renata 1 Quintana, Fernando Andrés 1 Shen, Yu 1 Soh, Yeng Chai 1 Suchard, Marc A. 1 Sun, Jessica 1 Sun, Qiao 1 Tang, Ying 1 Telesca, Donatello 1 Wei, Guo 1 Wei, Lin 1 Williamson, Sinead A. 1 Yue, Lu 1 Zaïane, Osmar R. 1 Zhang, Qiong 1 Zhang, Xue all top 5 Serials 11 Biometrics 6 Journal of the American Statistical Association 4 The Annals of Applied Statistics 3 Bayesian Analysis 2 International Journal of Bifurcation and Chaos in Applied Sciences and Engineering 2 Journal of Computational and Graphical Statistics 1 The Canadian Journal of Statistics 1 Journal of Fluid Mechanics 1 Physics Letters. A 1 Meccanica 1 Monatshefte für Mathematik 1 Statistical Science 1 Computational Statistics and Data Analysis 1 Statistica Sinica 1 Annales Academiae Scientiarum Fennicae. Mathematica 1 Journal of Vibration and Control 1 Journal of the Royal Statistical Society. Series C. Applied Statistics 1 Journal of Applied Statistics 1 Biostatistics 1 Progress in Natural Science 1 Brazilian Journal of Probability and Statistics 1 Journal of Shandong University. Natural Science 1 Journal of Statistical Theory and Practice 1 Statistics and Computing 1 Statistical Theory and Related Fields all top 5 Fields 40 Statistics (62-XX) 17 Biology and other natural sciences (92-XX) 6 Numerical analysis (65-XX) 3 Dynamical systems and ergodic theory (37-XX) 3 Computer science (68-XX) 2 Measure and integration (28-XX) 2 Mechanics of deformable solids (74-XX) 1 Combinatorics (05-XX) 1 Linear and multilinear algebra; matrix theory (15-XX) 1 Ordinary differential equations (34-XX) 1 Abstract harmonic analysis (43-XX) 1 Functional analysis (46-XX) 1 Global analysis, analysis on manifolds (58-XX) 1 Fluid mechanics (76-XX) 1 Systems theory; control (93-XX) 1 Information and communication theory, circuits (94-XX) Publications by Year all cited Publications top 5 cited Publications Citations contained in zbMATH Open 34 Publications have been cited 126 times in 104 Documents Cited by ▼ Year ▼ Heterogeneous reciprocal graphical models. Zbl 1414.62466Ni, Yang; Müller, Peter; Zhu, Yitan; Ji, Yuan 10 2018 A time-series DDP for functional proteomics profiles. Zbl 1272.62076Nieto-Barajas, Luis E.; Müller, Peter; Ji, Yuan; Lu, Yiling; Mills, Gordon B. 10 2012 Bayesian dose-finding in phase I/II clinical trials using toxicity and efficacy odds ratios. Zbl 1111.62114Yin, Guosheng; Li, Yisheng; Ji, Yuan 9 2006 Bayesian sparse graphical models for classification with application to protein expression data. Zbl 1303.62057Baladandayuthapani, Veerabhadran; Talluri, Rajesh; Ji, Yuan; Coombes, Kevin R.; Lu, Yiling; Hennessy, Bryan T.; Davies, Michael A.; Mallick, Bani K. 9 2014 Modeling protein expression and protein signaling pathways. Zbl 1258.62110Telesca, Donatello; Müller, Peter; Kornblau, Steven M.; Suchard, Marc A.; Ji, Yuan 9 2012 Monitoring late-onset toxicities in phase I trials using predicted risks. Zbl 1143.62072Bekele, B. Nebiyou; Ji, Yuan; Shen, Yu; Thall, Peter F. 8 2008 A Bayesian feature allocation model for tumor heterogeneity. Zbl 1397.62457Lee, Juhee; Müller, Peter; Gulukota, Kamalakar; Ji, Yuan 8 2015 A Bayesian graphical model for ChIP-Seq data on histone modifications. Zbl 1379.62079Mitra, Riten; Müller, Peter; Liang, Shoudan; Yue, Lu; Ji, Yuan 8 2013 Bayesian dose-finding in two treatment cycles based on the joint utility of efficacy and toxicity. Zbl 1373.62547Lee, Juhee; Thall, Peter F.; Ji, Yuan; Müller, Peter 7 2015 Practical impulsive synchronization of chaotic systems with parametric uncertainty and mismatch. Zbl 1170.37312Wen, C. Y.; Ji, Y.; Li, Z. G. 6 2007 Bayesian graphical models for differential pathways. Zbl 1359.62282Mitra, Riten; Müller, Peter; Ji, Yuan 6 2016 Bayesian nonparametric clustering for large data sets. Zbl 1430.62146Zuanetti, Daiane Aparecida; Müller, Peter; Zhu, Yitan; Yang, Shengjie; Ji, Yuan 5 2019 Impulsive synchronization of chaotic systems via linear matrix inequalities. Zbl 1097.94006Ji, Y.; Wen, C. Y.; Li, Z. G. 5 2006 MAD Bayes for tumor heterogeneity – feature allocation with exponential family sampling. Zbl 1373.62556Xu, Yanxun; Müller, Peter; Yuan, Yuan; Gulukota, Kamalakar; Ji, Yuan 4 2015 Bayesian double feature allocation for phenotyping with electronic health records. Zbl 1452.62835Ni, Yang; Müller, Peter; Ji, Yuan 3 2020 Scalable Bayesian nonparametric clustering and classification. Zbl 07499271Ni, Yang; Müller, Peter; Diesendruck, Maurice; Williamson, Sinead; Zhu, Yitan; Ji, Yuan 3 2020 Bayesian random segmentation models to identify shared copy number aberrations for array CGH data. Zbl 1388.62312Baladandayuthapani, Veerabhadran; Ji, Yuan; Talluri, Rajesh; Nieto-Barajas, Luis E.; Morris, Jeffrey S. 3 2010 TreeClone: reconstruction of tumor subclone phylogeny based on mutation pairs using next generation sequencing data. Zbl 1423.62155Zhou, Tianjian; Sengupta, Subhajit; Müller, Peter; Ji, Yuan 3 2019 Hajłasz-Sobolev type spaces and \(p\)-energy on the Sierpinski gasket. Zbl 1062.43006Hu, Jiaxin; Ji, Yuan; Wen, Zhiying 3 2005 Risk-group-specific dose finding based on an average toxicity score. Zbl 1192.62218Bekele, B. Nebiyou; Li, Yisheng; Ji, Yuan 3 2010 Reciprocal graphical models for integrative gene regulatory network analysis. Zbl 1407.62408Ni, Yang; Ji, Yuan; Müller, Peter 2 2018 Bayesian mixture models for complex high dimensional count data in phage display experiments. Zbl 1490.62361Ji, Yuan; Yin, Guosheng; Tsui, Kam-Wah; Kolonin, Mikhail G.; Sun, Jessica; Arap, Wadih; Pasqualini, Renata; Do, Kim-Anh 2 2007 The role of diffusion on the interface thickness in a ventilated filling box. Zbl 1193.76132Kaye, N. B.; Flynn, M. R.; Cook, M. J.; Ji, Y. 2 2010 Bayesian estimation of inverse dose response. Zbl 1151.62087Hu, Bo; Ji, Yuan; Tsui, Kam-Wah 2 2008 A Bayesian random partition model for sequential refinement and coagulation. Zbl 1436.62614Pagani Zanini, Carlos Tadeu; Müller, Peter; Ji, Yuan; Quintana, Fernando A. 1 2019 Clustering distributions with the marginalized nested Dirichlet process. Zbl 1414.62489Zuanetti, Daiane Aparecida; Müller, Peter; Zhu, Yitan; Yang, Shengjie; Ji, Yuan 1 2018 BM-map: Bayesian mapping of multireads for next-generation sequencing data. Zbl 1266.92049Ji, Yuan; Xu, Yanxun; Zhang, Qiong; Tsui, Kam-Wah; Yuan, Yuan; Norris, Clift jun.; Liang, Shoudan; Liang, Han 1 2011 Bayesian dose finding in phase I clinical trials based on a new statistical framework. Zbl 1144.62097Ji, Y.; Li, Y.; Yin, G. 1 2007 When is the union of two unit intervals a self-similar set satisfying the open set condition? Zbl 1151.28010Feng, De-Jun; Hua, Su; Ji, Yuan 1 2007 Heat kernel estimates on effective resistance metric spaces. Zbl 1151.58015Hu, Jiaxin; Ji, Yuan; Wen, Zhiying 1 2007 Synchronization of chaotic systems with parametric uncertainty and mismatch. Zbl 1139.93351Wen, C. Y.; Ji, Y.; Soh, Y. C.; Li, Z. G. 1 2006 Nonparametric Bayesian bi-clustering for next generation sequencing count data. Zbl 1329.62180Xu, Yanxun; Lee, Juhee; Yuan, Yuan; Mitra, Riten; Liang, Shoudan; Müller, Peter; Ji, Yuan 1 2013 Estimating latent cell subpopulations with Bayesian feature allocation models. Zbl 1338.92011Ji, Yuan; Sengupta, Subhajit; Lee, Juhee; Müller, Peter; Gulukota, Kamalakar 1 2015 Bayesian multiplicity control for multiple graphs. Zbl 1462.62365Mitra, Riten; Müller, Peter; Ji, Yuan 1 2017 Bayesian double feature allocation for phenotyping with electronic health records. Zbl 1452.62835Ni, Yang; Müller, Peter; Ji, Yuan 3 2020 Scalable Bayesian nonparametric clustering and classification. Zbl 07499271Ni, Yang; Müller, Peter; Diesendruck, Maurice; Williamson, Sinead; Zhu, Yitan; Ji, Yuan 3 2020 Bayesian nonparametric clustering for large data sets. Zbl 1430.62146Zuanetti, Daiane Aparecida; Müller, Peter; Zhu, Yitan; Yang, Shengjie; Ji, Yuan 5 2019 TreeClone: reconstruction of tumor subclone phylogeny based on mutation pairs using next generation sequencing data. Zbl 1423.62155Zhou, Tianjian; Sengupta, Subhajit; Müller, Peter; Ji, Yuan 3 2019 A Bayesian random partition model for sequential refinement and coagulation. Zbl 1436.62614Pagani Zanini, Carlos Tadeu; Müller, Peter; Ji, Yuan; Quintana, Fernando A. 1 2019 Heterogeneous reciprocal graphical models. Zbl 1414.62466Ni, Yang; Müller, Peter; Zhu, Yitan; Ji, Yuan 10 2018 Reciprocal graphical models for integrative gene regulatory network analysis. Zbl 1407.62408Ni, Yang; Ji, Yuan; Müller, Peter 2 2018 Clustering distributions with the marginalized nested Dirichlet process. Zbl 1414.62489Zuanetti, Daiane Aparecida; Müller, Peter; Zhu, Yitan; Yang, Shengjie; Ji, Yuan 1 2018 Bayesian multiplicity control for multiple graphs. Zbl 1462.62365Mitra, Riten; Müller, Peter; Ji, Yuan 1 2017 Bayesian graphical models for differential pathways. Zbl 1359.62282Mitra, Riten; Müller, Peter; Ji, Yuan 6 2016 A Bayesian feature allocation model for tumor heterogeneity. Zbl 1397.62457Lee, Juhee; Müller, Peter; Gulukota, Kamalakar; Ji, Yuan 8 2015 Bayesian dose-finding in two treatment cycles based on the joint utility of efficacy and toxicity. Zbl 1373.62547Lee, Juhee; Thall, Peter F.; Ji, Yuan; Müller, Peter 7 2015 MAD Bayes for tumor heterogeneity – feature allocation with exponential family sampling. Zbl 1373.62556Xu, Yanxun; Müller, Peter; Yuan, Yuan; Gulukota, Kamalakar; Ji, Yuan 4 2015 Estimating latent cell subpopulations with Bayesian feature allocation models. Zbl 1338.92011Ji, Yuan; Sengupta, Subhajit; Lee, Juhee; Müller, Peter; Gulukota, Kamalakar 1 2015 Bayesian sparse graphical models for classification with application to protein expression data. Zbl 1303.62057Baladandayuthapani, Veerabhadran; Talluri, Rajesh; Ji, Yuan; Coombes, Kevin R.; Lu, Yiling; Hennessy, Bryan T.; Davies, Michael A.; Mallick, Bani K. 9 2014 A Bayesian graphical model for ChIP-Seq data on histone modifications. Zbl 1379.62079Mitra, Riten; Müller, Peter; Liang, Shoudan; Yue, Lu; Ji, Yuan 8 2013 Nonparametric Bayesian bi-clustering for next generation sequencing count data. Zbl 1329.62180Xu, Yanxun; Lee, Juhee; Yuan, Yuan; Mitra, Riten; Liang, Shoudan; Müller, Peter; Ji, Yuan 1 2013 A time-series DDP for functional proteomics profiles. Zbl 1272.62076Nieto-Barajas, Luis E.; Müller, Peter; Ji, Yuan; Lu, Yiling; Mills, Gordon B. 10 2012 Modeling protein expression and protein signaling pathways. Zbl 1258.62110Telesca, Donatello; Müller, Peter; Kornblau, Steven M.; Suchard, Marc A.; Ji, Yuan 9 2012 BM-map: Bayesian mapping of multireads for next-generation sequencing data. Zbl 1266.92049Ji, Yuan; Xu, Yanxun; Zhang, Qiong; Tsui, Kam-Wah; Yuan, Yuan; Norris, Clift jun.; Liang, Shoudan; Liang, Han 1 2011 Bayesian random segmentation models to identify shared copy number aberrations for array CGH data. Zbl 1388.62312Baladandayuthapani, Veerabhadran; Ji, Yuan; Talluri, Rajesh; Nieto-Barajas, Luis E.; Morris, Jeffrey S. 3 2010 Risk-group-specific dose finding based on an average toxicity score. Zbl 1192.62218Bekele, B. Nebiyou; Li, Yisheng; Ji, Yuan 3 2010 The role of diffusion on the interface thickness in a ventilated filling box. Zbl 1193.76132Kaye, N. B.; Flynn, M. R.; Cook, M. J.; Ji, Y. 2 2010 Monitoring late-onset toxicities in phase I trials using predicted risks. Zbl 1143.62072Bekele, B. Nebiyou; Ji, Yuan; Shen, Yu; Thall, Peter F. 8 2008 Bayesian estimation of inverse dose response. Zbl 1151.62087Hu, Bo; Ji, Yuan; Tsui, Kam-Wah 2 2008 Practical impulsive synchronization of chaotic systems with parametric uncertainty and mismatch. Zbl 1170.37312Wen, C. Y.; Ji, Y.; Li, Z. G. 6 2007 Bayesian mixture models for complex high dimensional count data in phage display experiments. Zbl 1490.62361Ji, Yuan; Yin, Guosheng; Tsui, Kam-Wah; Kolonin, Mikhail G.; Sun, Jessica; Arap, Wadih; Pasqualini, Renata; Do, Kim-Anh 2 2007 Bayesian dose finding in phase I clinical trials based on a new statistical framework. Zbl 1144.62097Ji, Y.; Li, Y.; Yin, G. 1 2007 When is the union of two unit intervals a self-similar set satisfying the open set condition? Zbl 1151.28010Feng, De-Jun; Hua, Su; Ji, Yuan 1 2007 Heat kernel estimates on effective resistance metric spaces. Zbl 1151.58015Hu, Jiaxin; Ji, Yuan; Wen, Zhiying 1 2007 Bayesian dose-finding in phase I/II clinical trials using toxicity and efficacy odds ratios. Zbl 1111.62114Yin, Guosheng; Li, Yisheng; Ji, Yuan 9 2006 Impulsive synchronization of chaotic systems via linear matrix inequalities. Zbl 1097.94006Ji, Y.; Wen, C. Y.; Li, Z. G. 5 2006 Synchronization of chaotic systems with parametric uncertainty and mismatch. Zbl 1139.93351Wen, C. Y.; Ji, Y.; Soh, Y. C.; Li, Z. G. 1 2006 Hajłasz-Sobolev type spaces and \(p\)-energy on the Sierpinski gasket. Zbl 1062.43006Hu, Jiaxin; Ji, Yuan; Wen, Zhiying 3 2005 all cited Publications top 5 cited Publications all top 5 Cited by 225 Authors 18 Müller, Peter 16 Ji, Yuan 7 Baladandayuthapani, Veerabhadran 7 Ni, Yang 6 Yuan, Ying 5 Mitra, Riten 5 Thall, Peter F. 4 Quintana, Fernando Andrés 3 Chen, Li-Pang 3 Cheung, Ying Kuen K. 3 Lee, Juhee 3 Lu, Yiling 3 Mallick, Bani K. 3 Nieto-Barajas, Luis E. 3 Page, Garritt L. 3 Sengupta, Subhajit 3 Stingo, Francesco Claudio 3 Yin, Guosheng 3 Zhu, Yitan 2 Arbel, Julyan 2 Braun, Thomas M. 2 Consonni, Guido 2 Do, Kim-Anh 2 Gu, Jiangwen 2 Guindani, Michele 2 Gulukota, Kamalakar 2 León-Novelo, Luis G. 2 Lin, Ruitao 2 Mills, Gordon B. 2 Pasqualini, Renata 2 Sun, Jessica 2 Vannucci, Marina 2 Xi, Lifeng 2 Xu, Yanxun 2 Ye, Qianqian 2 Zhou, Tianjian 1 Airoldi, Edoardo M. 1 Akbani, Rehan 1 Amin, Hesham M. 1 Arap, Wadih 1 Arap, Wahid 1 Argiento, Raffaele 1 Baladandayuthapani, Veera 1 Banerjee, Sayantan 1 Bashir, Amir 1 Bassetti, Federico 1 Baudoin, Fabrice 1 Bekele, B. Nebiyou 1 Bellio, Ruggero 1 Bhattacharya, Indrabati 1 Bolin, David 1 Camchong, Jazmin 1 Camerlenghi, Federico 1 Cao, Sha 1 Cao, Xuan 1 Carlin, Bradley P. 1 Carvalho, Carlos Marinho 1 Casciola-Rosen, Livia 1 Castelletti, Federico 1 Chakraborty, Bibhas 1 Chen, Li 1 Cheng, Bin 1 Chung, Hee Cheol 1 Cook-Wiens, Galen 1 Coombes, Kevin R. 1 Costa, Thiago 1 Cremaschi, Andrea 1 Dahl, David B. 1 Dalton, Lori A. 1 Davidson, Karina W. 1 Davies, Michael A. 1 de Blasi, Pierpaolo 1 de Carvalho, Miguel 1 De Vito, Roberta 1 De Wiel, Mark A. van 1 Denti, Francesco 1 Deutsch, Roland C. 1 DeYoreo, Maria 1 Diesendruck, Maurice 1 DiLernia, Andrew 1 Drovandi, Christopher C. 1 Duan, Xingde 1 Fan, Jiaqi 1 Fearnhead, Paul 1 Flaherty, Patrick 1 Flowers, Christopher R. 1 Fop, Michael 1 Fornstedt, Torgny 1 Forssén, Patrik 1 Fu, Haoda 1 Gao, Chen 1 Gaynanova, Irina 1 Ghosal, Subhashis 1 Gillard, Jonathan W. 1 Gu, Yuqi 1 Guo, Beibei 1 Gutiérrez-Peña, Eduardo 1 Ha, Min Jin 1 Hahn, P. Richard 1 Hassan, Manal M. ...and 125 more Authors all top 5 Cited in 36 Serials 15 The Annals of Applied Statistics 13 Biometrics 13 Journal of the American Statistical Association 9 Bayesian Analysis 5 Journal of Computational and Graphical Statistics 3 Journal of Multivariate Analysis 3 Computational Statistics and Data Analysis 3 Journal of Statistical Theory and Practice 3 Statistics and Computing 2 Biometrical Journal 2 Fractals 2 Journal of Applied Statistics 2 Statistical Methods and Applications 2 Statistics Surveys 1 Journal of Mathematical Analysis and Applications 1 Journal of Statistical Planning and Inference 1 Journal of Time Series Analysis 1 Journal of Classification 1 Statistical Science 1 Forum Mathematicum 1 Computational Statistics 1 Communications in Statistics. Simulation and Computation 1 Communications in Statistics. Theory and Methods 1 Journal of Statistical Computation and Simulation 1 Test 1 Lifetime Data Analysis 1 Biostatistics 1 Brazilian Journal of Probability and Statistics 1 Bulletin of the Malaysian Mathematical Sciences Society. Second Series 1 Statistical Applications in Genetics and Molecular Biology 1 Journal of the Korean Statistical Society 1 Electronic Journal of Statistics 1 Journal of Probability and Statistics 1 Dependence Modeling 1 Journal of Statistical Distributions and Applications 1 Annales Fennici Mathematici all top 5 Cited in 14 Fields 99 Statistics (62-XX) 23 Biology and other natural sciences (92-XX) 6 Probability theory and stochastic processes (60-XX) 5 Numerical analysis (65-XX) 3 Measure and integration (28-XX) 3 Computer science (68-XX) 1 Combinatorics (05-XX) 1 Functions of a complex variable (30-XX) 1 Potential theory (31-XX) 1 Partial differential equations (35-XX) 1 Functional analysis (46-XX) 1 Operator theory (47-XX) 1 Global analysis, analysis on manifolds (58-XX) 1 Mathematics education (97-XX) Citations by Year