×
Author ID: suchard.marc-a Recent zbMATH articles by "Suchard, Marc A."
Published as: Suchard, Marc A.
External Links: MGP · Wikidata

Publications by Year

Citations contained in zbMATH Open

29 Publications have been cited 177 times in 140 Documents Cited by Year
Transition probabilities for general birth-death processes with applications in ecology, genetics, and evolution. Zbl 1252.92053
Crawford, Forrest W.; Suchard, Marc A.
35
2012
Estimation for general birth-death processes. Zbl 1367.62245
Crawford, Forrest W.; Minin, Vladimir N.; Suchard, Marc A.
18
2014
Birth/birth-death processes and their computable transition probabilities with biological applications. Zbl 1384.60094
Ho, Lam Si Tung; Xu, Jason; Crawford, Forrest W.; Minin, Vladimir N.; Suchard, Marc A.
12
2018
Modeling protein expression and protein signaling pathways. Zbl 1258.62110
Telesca, Donatello; Müller, Peter; Kornblau, Steven M.; Suchard, Marc A.; Ji, Yuan
10
2012
Assessing phenotypic correlation through the multivariate phylogenetic latent liability model. Zbl 1454.62324
Cybis, Gabriela B.; Sinsheimer, Janet S.; Bedford, Trevor; Mather, Alison E.; Lemey, Philippe; Suchard, Marc A.
9
2015
Graphics processing units and high-dimensional optimization. Zbl 1329.62028
Zhou, Hua; Lange, Kenneth; Suchard, Marc A.
9
2010
Bayesian analysis of elapsed times in continuous-time Markov chains. Zbl 1153.62019
Ferreira, Marco A. R.; Suchard, Marc A.
9
2008
Fitting birth-death processes to panel data with applications to bacterial DNA fingerprinting. Zbl 1283.92027
Doss, Charles R.; Suchard, Marc A.; Holmes, Ian; Kato-Maeda, Midori; Minin, Vladimir N.
8
2013
Counting labeled transitions in continuous-time Markov models of evolution. Zbl 1145.60323
Minin, Vladimir N.; Suchard, Marc A.
8
2008
Inferring spatial phylogenetic variation along nucleotide sequences: A multiple changepoint model. Zbl 1041.62095
Suchard, Marc A.; Weiss, Robert E.; Dorman, Karin S.; Sinsheimer, Janet S.
7
2003
Alignment uncertainty and genomic analysis. Zbl 1226.92028
Wong, Karen M.; Suchard, Marc A.; Huelsenbeck, John P.
6
2008
Massive parallelization of serial inference algorithms for a complex generalized linear model. Zbl 1386.65065
Suchard, Marc A.; Simpson, Shawn E.; Zorych, Ivan; Ryan, Patrick; Madigan, David
6
2013
Direct likelihood-based inference for discretely observed stochastic compartmental models of infectious disease. Zbl 1405.62177
Ho, Lam Si Tung; Crawford, Forrest W.; Suchard, Marc A.
5
2018
Large-scale inference of correlation among mixed-type biological traits with phylogenetic multivariate probit models. Zbl 1475.62273
Zhang, Zhenyu; Nishimura, Akihiko; Bastide, Paul; Ji, Xiang; Payne, Rebecca P.; Goulder, Philip; Lemey, Philippe; Suchard, Marc A.
5
2021
Sex, lies and self-reported counts: Bayesian mixture models for heaping in longitudinal count data via birth-death processes. Zbl 1397.62447
Crawford, Forrest W.; Weiss, Robert E.; Suchard, Marc A.
4
2015
Consistency and convergence rate of phylogenetic inference via regularization. Zbl 1395.05036
Dinh, Vu; Ho, Lam Si Tung; Suchard, Marc A.; Matsen, Frederick A. IV
4
2018
Reuse, recycle, reweigh: combating influenza through efficient sequential Bayesian computation for massive data. Zbl 1220.62144
Tom, Jennifer A.; Sinsheimer, Janet S.; Suchard, Marc A.
3
2010
Scalable Bayesian inference for self-excitatory stochastic processes applied to big American gunfire data. Zbl 1461.62018
Holbrook, Andrew J.; Loeffler, Charles E.; Flaxman, Seth R.; Suchard, Marc A.
3
2021
Massive parallelization boosts big Bayesian multidimensional scaling. Zbl 07499878
Holbrook, Andrew J.; Lemey, Philippe; Baele, Guy; Dellicour, Simon; Brockmann, Dirk; Rambaut, Andrew; Suchard, Marc A.
3
2021
Two-way Bayesian hierarchical phylogenetic models: an application to the co-evolution of gp120 and gp41 during and after enfuvirtide treatment. Zbl 1452.62818
Kitchen, Christina M. R.; Kroll, Jing; Kuritzkes, Daniel R.; Bloomquist, Erik; Deeks, Steven G.; Suchard, Marc A.
2
2009
Efficient Bayesian inference of general Gaussian models on large phylogenetic trees. Zbl 1477.62308
Bastide, Paul; Ho, Lam Si Tung; Baele, Guy; Lemey, Philippe; Suchard, Marc A.
2
2021
Bayesian mitigation of spatial coarsening for a Hawkes model applied to gunfire, wildfire and viral contagion. Zbl 1498.62179
Holbrook, Andrew J.; Ji, Xiang; Suchard, Marc A.
2
2022
Evolutionary similarity among genes. Zbl 1040.62105
Suchard, Marc A.; Weiss, Robert E.; Sinsheimer, Janet S.; Dorman, Karin S.; Patel, Megha; McCabe, Edward R. B.
1
2003
Models for estimating Bayes factors with applications to phylogeny and tests of monophyly. Zbl 1079.62122
Suchard, Marc A.; Weiss, Robert E.; Sinsheimer, Janet S.
1
2005
Multiple self-controlled case series for large-scale longitudinal observational databases. Zbl 1419.62449
Simpson, Shawn E.; Madigan, David; Zorych, Ivan; Schuemie, Martijn J.; Ryan, Patrick B.; Suchard, Marc A.
1
2013
Bayesian nonparametric phylodynamics. Zbl 1419.92028
Palacios, Julia A.; Gill, Mandev S.; Suchard, Marc A.; Minin, Vladimir N.
1
2014
Hierarchical models for multiple, rare outcomes using massive observational healthcare databases. Zbl 07260594
Shaddox, Trevor R.; Ryan, Patrick B.; Schuemie, Martijn J.; Madigan, David; Suchard, Marc A.
1
2016
Scalable algorithms for large competing risks data. Zbl 07499910
Kawaguchi, Eric S.; Shen, Jenny I.; Suchard, Marc A.; Li, Gang
1
2021
Prior-preconditioned conjugate gradient method for accelerated Gibbs sampling in “large \(n\), large \(p\)” Bayesian sparse regression. Zbl 07784922
Nishimura, Akihiko; Suchard, Marc A.
1
2023
Prior-preconditioned conjugate gradient method for accelerated Gibbs sampling in “large \(n\), large \(p\)” Bayesian sparse regression. Zbl 07784922
Nishimura, Akihiko; Suchard, Marc A.
1
2023
Bayesian mitigation of spatial coarsening for a Hawkes model applied to gunfire, wildfire and viral contagion. Zbl 1498.62179
Holbrook, Andrew J.; Ji, Xiang; Suchard, Marc A.
2
2022
Large-scale inference of correlation among mixed-type biological traits with phylogenetic multivariate probit models. Zbl 1475.62273
Zhang, Zhenyu; Nishimura, Akihiko; Bastide, Paul; Ji, Xiang; Payne, Rebecca P.; Goulder, Philip; Lemey, Philippe; Suchard, Marc A.
5
2021
Scalable Bayesian inference for self-excitatory stochastic processes applied to big American gunfire data. Zbl 1461.62018
Holbrook, Andrew J.; Loeffler, Charles E.; Flaxman, Seth R.; Suchard, Marc A.
3
2021
Massive parallelization boosts big Bayesian multidimensional scaling. Zbl 07499878
Holbrook, Andrew J.; Lemey, Philippe; Baele, Guy; Dellicour, Simon; Brockmann, Dirk; Rambaut, Andrew; Suchard, Marc A.
3
2021
Efficient Bayesian inference of general Gaussian models on large phylogenetic trees. Zbl 1477.62308
Bastide, Paul; Ho, Lam Si Tung; Baele, Guy; Lemey, Philippe; Suchard, Marc A.
2
2021
Scalable algorithms for large competing risks data. Zbl 07499910
Kawaguchi, Eric S.; Shen, Jenny I.; Suchard, Marc A.; Li, Gang
1
2021
Birth/birth-death processes and their computable transition probabilities with biological applications. Zbl 1384.60094
Ho, Lam Si Tung; Xu, Jason; Crawford, Forrest W.; Minin, Vladimir N.; Suchard, Marc A.
12
2018
Direct likelihood-based inference for discretely observed stochastic compartmental models of infectious disease. Zbl 1405.62177
Ho, Lam Si Tung; Crawford, Forrest W.; Suchard, Marc A.
5
2018
Consistency and convergence rate of phylogenetic inference via regularization. Zbl 1395.05036
Dinh, Vu; Ho, Lam Si Tung; Suchard, Marc A.; Matsen, Frederick A. IV
4
2018
Hierarchical models for multiple, rare outcomes using massive observational healthcare databases. Zbl 07260594
Shaddox, Trevor R.; Ryan, Patrick B.; Schuemie, Martijn J.; Madigan, David; Suchard, Marc A.
1
2016
Assessing phenotypic correlation through the multivariate phylogenetic latent liability model. Zbl 1454.62324
Cybis, Gabriela B.; Sinsheimer, Janet S.; Bedford, Trevor; Mather, Alison E.; Lemey, Philippe; Suchard, Marc A.
9
2015
Sex, lies and self-reported counts: Bayesian mixture models for heaping in longitudinal count data via birth-death processes. Zbl 1397.62447
Crawford, Forrest W.; Weiss, Robert E.; Suchard, Marc A.
4
2015
Estimation for general birth-death processes. Zbl 1367.62245
Crawford, Forrest W.; Minin, Vladimir N.; Suchard, Marc A.
18
2014
Bayesian nonparametric phylodynamics. Zbl 1419.92028
Palacios, Julia A.; Gill, Mandev S.; Suchard, Marc A.; Minin, Vladimir N.
1
2014
Fitting birth-death processes to panel data with applications to bacterial DNA fingerprinting. Zbl 1283.92027
Doss, Charles R.; Suchard, Marc A.; Holmes, Ian; Kato-Maeda, Midori; Minin, Vladimir N.
8
2013
Massive parallelization of serial inference algorithms for a complex generalized linear model. Zbl 1386.65065
Suchard, Marc A.; Simpson, Shawn E.; Zorych, Ivan; Ryan, Patrick; Madigan, David
6
2013
Multiple self-controlled case series for large-scale longitudinal observational databases. Zbl 1419.62449
Simpson, Shawn E.; Madigan, David; Zorych, Ivan; Schuemie, Martijn J.; Ryan, Patrick B.; Suchard, Marc A.
1
2013
Transition probabilities for general birth-death processes with applications in ecology, genetics, and evolution. Zbl 1252.92053
Crawford, Forrest W.; Suchard, Marc A.
35
2012
Modeling protein expression and protein signaling pathways. Zbl 1258.62110
Telesca, Donatello; Müller, Peter; Kornblau, Steven M.; Suchard, Marc A.; Ji, Yuan
10
2012
Graphics processing units and high-dimensional optimization. Zbl 1329.62028
Zhou, Hua; Lange, Kenneth; Suchard, Marc A.
9
2010
Reuse, recycle, reweigh: combating influenza through efficient sequential Bayesian computation for massive data. Zbl 1220.62144
Tom, Jennifer A.; Sinsheimer, Janet S.; Suchard, Marc A.
3
2010
Two-way Bayesian hierarchical phylogenetic models: an application to the co-evolution of gp120 and gp41 during and after enfuvirtide treatment. Zbl 1452.62818
Kitchen, Christina M. R.; Kroll, Jing; Kuritzkes, Daniel R.; Bloomquist, Erik; Deeks, Steven G.; Suchard, Marc A.
2
2009
Bayesian analysis of elapsed times in continuous-time Markov chains. Zbl 1153.62019
Ferreira, Marco A. R.; Suchard, Marc A.
9
2008
Counting labeled transitions in continuous-time Markov models of evolution. Zbl 1145.60323
Minin, Vladimir N.; Suchard, Marc A.
8
2008
Alignment uncertainty and genomic analysis. Zbl 1226.92028
Wong, Karen M.; Suchard, Marc A.; Huelsenbeck, John P.
6
2008
Models for estimating Bayes factors with applications to phylogeny and tests of monophyly. Zbl 1079.62122
Suchard, Marc A.; Weiss, Robert E.; Sinsheimer, Janet S.
1
2005
Inferring spatial phylogenetic variation along nucleotide sequences: A multiple changepoint model. Zbl 1041.62095
Suchard, Marc A.; Weiss, Robert E.; Dorman, Karin S.; Sinsheimer, Janet S.
7
2003
Evolutionary similarity among genes. Zbl 1040.62105
Suchard, Marc A.; Weiss, Robert E.; Sinsheimer, Janet S.; Dorman, Karin S.; Patel, Megha; McCabe, Edward R. B.
1
2003
all top 5

Cited by 322 Authors

22 Suchard, Marc A.
10 Ho, Lam Si Tung
6 Di Crescenzo, Antonio
6 Lemey, Philippe
6 Minin, Vladimir N.
5 Crawford, Forrest W.
4 Dinh, Vu
4 Ferreira, Marco A. R.
4 Giorno, Virginia
4 Holbrook, Andrew J.
4 Nobile, Amelia G.
4 Sinsheimer, Janet S.
4 Xu, Jason
3 Baladandayuthapani, Veerabhadran
3 Ni, Yang
3 Sherlock, Chris
3 Spina, Serena
2 Baele, Guy
2 Bastide, Paul
2 Bouchard-Côté, Alexandre
2 Daskalakis, Constantinos
2 Duan, Dongli
2 Franck, Christopher T.
2 Golightly, Andrew
2 Goudie, Robert J. B.
2 Hautphenne, Sophie
2 Hobolth, Asger
2 Ji, Xiang
2 Ji, Yuan
2 Kato-Maeda, Midori
2 Kawaguchi, Eric S.
2 Lange, Kenneth L.
2 Li, Gang
2 Lv, Changchun
2 Madigan, David
2 Mandjes, Michel Robertus Hendrikus
2 Martinucci, Barbara
2 Matsen, Frederick A. IV
2 Morris, Jeffrey S.
2 Müller, Peter
2 Nguyen, Binh Thanh
2 Nishimura, Akihiko
2 Roch, Sébastien
2 Ryan, Patrick B.
2 Salazar, Esther
2 Schuemie, Martijn J.
2 Si, Shubin
2 Sollie, Birgit
2 Stadler, Tanja
2 Stingo, Francesco Claudio
2 Stutz, Timothy C.
2 Vannucci, Marina
2 Wang, Min
2 Weiss, Robert E.
2 Xie, Junlan
2 Zhou, Hua
1 Aiello, Allison E.
1 Ainsworth, Holly F.
1 Aitkin, Murray
1 Allen, William L.
1 Amin, Hesham M.
1 Anceschi, Niccolo
1 Andoni, Alexandr
1 Andronov, Alexander M.
1 Argiento, Raffaele
1 Asadi, Majid
1 Asimomitis, Georgios
1 Baraviera, Alexandre Tavares
1 Bartoszek, Krzysztof
1 Bedford, Trevor
1 Berthouze, Luc
1 Beskos, Alexandros
1 Bhanot, Gyan V.
1 Binh T. Nguyen
1 Biron-Lattes, Miguel
1 Bloomquist, Erik W.
1 Bonat, Wagner Hugo
1 Boys, Richard J.
1 Brockmann, Dirk
1 Browne, Ryan P.
1 Browning, Raiha
1 Bu, Fan
1 Busch, Jorge R.
1 Butov, Aleksandr Aleksandrovich
1 Campbell, Trevor
1 Cappello, Lorenzo
1 Chattopadhyay, Sujay
1 Chen, Guang-Wu
1 Chen, Yong
1 Chen, Zezhun
1 Chi, Peter B.
1 Clarté, Grégoire
1 Consonni, Guido
1 Cremaschi, Andrea
1 Crespo, Fausto F.
1 Csűrös, Miklós
1 Cybis, Gabriela Bettella
1 Dassios, Angelos
1 Davison, Anthony C.
1 de Angelis, Daniela
...and 222 more Authors
all top 5

Cited in 61 Serials

16 The Annals of Applied Statistics
8 Journal of the American Statistical Association
7 Biometrics
7 Computational Statistics and Data Analysis
7 Bayesian Analysis
6 Journal of Computational and Graphical Statistics
5 Journal of Mathematical Biology
4 Statistics & Probability Letters
4 Statistics and Computing
4 Journal of Theoretical Biology
3 Mathematical Biosciences
3 Bulletin of Mathematical Biology
3 Applied Mathematics and Computation
3 Theoretical Population Biology
2 Mathematical Methods in the Applied Sciences
2 Physica A
2 Ricerche di Matematica
2 Statistical Science
2 Computational Statistics
2 Stochastic Processes and their Applications
2 Stochastics and Dynamics
2 Journal of Statistical Theory and Practice
2 Croatian Operational Research Review (CRORR)
1 Advances in Applied Probability
1 Computers & Mathematics with Applications
1 Journal of Mathematical Analysis and Applications
1 Scandinavian Journal of Statistics
1 Annals of the Institute of Statistical Mathematics
1 BIT
1 Information Sciences
1 Journal of Applied Probability
1 Journal of Statistical Planning and Inference
1 Asymptotic Analysis
1 The Annals of Applied Probability
1 Applied Mathematical Modelling
1 SIAM Review
1 Mathematical Programming. Series A. Series B
1 Journal of Mathematical Sciences (New York)
1 Australian & New Zealand Journal of Statistics
1 International Journal of Theoretical and Applied Finance
1 Statistical Inference for Stochastic Processes
1 Communications in Contemporary Mathematics
1 Probability in the Engineering and Informational Sciences
1 Methodology and Computing in Applied Probability
1 Biostatistics
1 RAIRO. Operations Research
1 Stochastic Models
1 Statistical Applications in Genetics and Molecular Biology
1 Computational Biology and Chemistry
1 SORT. Statistics and Operations Research Transactions
1 Statistical Methods and Applications
1 Journal of Statistical Mechanics: Theory and Experiment
1 Journal of Biological Dynamics
1 Statistical Analysis and Data Mining
1 European Journal of Pure and Applied Mathematics
1 Electronic Journal of Statistics
1 Vestnik Samarskogo Gosudarstvennogo Tekhnicheskogo Universiteta. Seriya Fiziko-Matematicheskie Nauki
1 Journal of Agricultural, Biological, and Environmental Statistics
1 Sankhyā. Series B
1 Journal of Statistical Distributions and Applications
1 AIMS Mathematics

Citations by Year

The data are displayed as stored in Wikidata under a Creative Commons CC0 License. Updates and corrections should be made in Wikidata.