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EpiModel

swMATH ID: 16142
Software Authors: Jenness, Samuel; Goodreau, Steven M.; Morris, Martina; Beylerian, Emily; Bender-deMoll, Skye; Weiss, Kevis
Description: R package EpiModel. Tools for simulating mathematical models of infectious disease. Epidemic model classes include deterministic compartmental models, stochastic agent-based models, and stochastic network models. Network models use the robust statistical methods of exponential-family random graph models (ERGMs) from the Statnet suite of software packages in R. Standard templates for epidemic modeling include SI, SIR, and SIS disease types. EpiModel features an easy API for extending these templates to address novel scientific research aims.
Homepage: https://cran.r-project.org/web/packages/EpiModel/index.html
Source Code:  https://github.com/cran/EpiModel
Dependencies: R
Keywords: CRAN; R package; Epidemic model; Infectious Disease; ERGMs; Statnet
Related Software: R; ergm; Python; SciPy; statnet; igraph; EoN; epinet; Surveillance; NumPy; Graph-tool; epydemic; EpiEstim; R0; Stan; amei; lvm4net; latentnet; JAX; Nestle
Cited in: 12 Documents

Standard Articles

1 Publication describing the Software Year
EpiModel: An R Package for Mathematical Modeling of Infectious Disease over Networks Link
Samuel Jenness; Steven Goodreau; Martina Morris
2018

Citations by Year