swMATH ID: 16999
Software Authors: Dean Laslett, Bjorn Canback
Description: ARAGORN, a program to detect tRNA genes and tmRNA genes in nucleotide sequences. A computer program, ARAGORN, identifies tRNA and tmRNA genes. The program employs heuristic algorithms to predict tRNA secondary structure, based on homology with recognized tRNA consensus sequences and ability to form a base‐paired cloverleaf. tmRNA genes are identified using a modified version of the BRUCE program. ARAGORN achieves a detection sensitivity of 99
Homepage: http://mbio-serv2.mbioekol.lu.se/ARAGORN/
Related Software: tRNAscan-SE; PlantTFDB; eggNOG; ELM; dbCAN; antiSMASH; dissectHMMER; HPMV; ANNIE; FreeContact; CCMpred; NNcon; MetaPSICOV; PconsFold; PSICOV; APOLLO; CONFOLD; ncPred; STITCH; MIND-BEST
Cited in: 2 Publications

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