NNcon swMATH ID: 17013 Software Authors: Allison N. Tegge, Zheng Wang, Jesse Eickholt, Jianlin Cheng Description: NNcon: improved protein contact map prediction using 2D-recursive neural networks. Protein contact map prediction is useful for protein folding rate prediction, model selection and 3D structure prediction. Here we describe NNcon, a fast and reliable contact map prediction server and software. NNcon was ranked among the most accurate residue contact predictors in the Eighth Critical Assessment of Techniques for Protein Structure Prediction (CASP8), 2008. Both NNcon server and software are available at http://casp.rnet.missouri.edu/nncon.html. Homepage: http://nar.oxfordjournals.org/content/37/suppl_2/W515.short Related Software: PSICOV; Ontobee; PlantTFDB; eggNOG; ELM; dbCAN; antiSMASH; dissectHMMER; HPMV; ANNIE; FreeContact; CCMpred; MetaPSICOV; PconsFold; APOLLO; CONFOLD; ncPred; STITCH; MIND-BEST; SPAdes Cited in: 3 Publications all top 5 Cited by 9 Authors 1 Aguilar-Ruiz, Jesus Salvador 1 Asencio-Cortes, Gualberto 1 Carugo, Oliviero 1 Divina, Federico 1 Eisenhaber, Frank 1 Fonseca, Rasmus 1 Helles, Glennie 1 Marquez-Chamorro, Alfonso Eduardo 1 Winter, Pawel Cited in 3 Serials 1 PAA. Pattern Analysis and Applications 1 JMMA. Journal of Mathematical Modelling and Algorithms 1 Methods in Molecular Biology Cited in 4 Fields 3 Biology and other natural sciences (92-XX) 1 General topology (54-XX) 1 Statistics (62-XX) 1 Operations research, mathematical programming (90-XX) Citations by Year