wTO swMATH ID: 20296 Software Authors: Gysi, Deisy Morselli; Voigt, Andre; Fragoso, Tiago Miranda; Almaas, Eivind; Nowick, Katja Description: R package wTO. Computing Weighted Topological Overlaps (wTO) & Consensus wTO Network. Computes the Weighted Topological Overlap (wTO) networks. Once a data.frame containing the count/ expression/ abundance per sample, and a vector containing the interested nodes of interaction.It also computes the cut-off threshold or p-value based on the individuals bootstrap or the values reshuffle per individual. It also allows the construction of a Consensus network, based on multiple wTOs. Also includes a visualization tool for the final network. Homepage: https://cran.r-project.org/web/packages/wTO/index.html Source Code: https://github.com/cran/wTO Dependencies: R Keywords: Molecular Networks; arXiv q-bio.MN; arXiv; CRAN; Co-expression network; Network; Expression; R package; Software; Consensus Network; wTO Related Software: som; visNetwork; R; data.table; stringr; igraph; network; WGCNA Cited in: 0 Documents