kdetrees swMATH ID: 20297 Software Authors: Grady Weyenberg, Ruriko Yoshida Description: R package kdetrees: Nonparametric method for identifying discordant phylogenetic trees. A non-parametric method for identifying potential outlying observations in a collection of phylogenetic trees based on the methods of Owen and Provan (2011). Such discordant trees may indicate problems with sequence annotation or tree reconstruction, or they may represent interesting biological phenomena, such as horizontal gene transfers. Homepage: https://cran.r-project.org/web/packages/kdetrees/index.html Source Code: https://github.com/cran/kdetrees Dependencies: R Related Software: BEAST; Mesquite; PhyloNet; ASTRAL-II; Phylo-MCOA; PAML; CLIFF; t-SNE; Clustal X; ape; MrBayes; tree-structured-covariance; MEGA Cited in: 5 Publications all top 5 Cited by 9 Authors 2 Willis, Amy D. 2 Yoshida, Ruriko 1 Bunge, John 1 Fukumizu, Kenji 1 Grindstaff, Gillian Roxanne 1 Owen, Megan 1 Vogiatzis, Chrysafis 1 Xi, Jing 1 Xie, Jin Cited in 5 Serials 1 Annals of the Institute of Statistical Mathematics 1 Journal of the American Statistical Association 1 Journal of Statistical Planning and Inference 1 Annals of Operations Research 1 SIAM Journal on Applied Algebra and Geometry Cited in 4 Fields 3 Statistics (62-XX) 3 Biology and other natural sciences (92-XX) 2 Combinatorics (05-XX) 1 Convex and discrete geometry (52-XX) Citations by Year