UniProt swMATH ID: 21320 Software Authors: The UniProt Consortium; Apweiler, R.; Bairoch, A.; Wu, C. H.; Barker, W. C.; Boeckmann, B.; Ferro, S.; Gasteiger, E.; Huang, H.; Lopez, R.; Magrane, M.; Martin, M. J.; Natale, D. A.; O’donovan, C.; Redaschi, N.; Yeh, L. S. Description: UniProt: a hub for protein information. UniProt is an important collection of protein sequences and their annotations, which has doubled in size to 80 million sequences during the past year. This growth in sequences has prompted an extension of UniProt accession number space from 6 to 10 characters. An increasing fraction of new sequences are identical to a sequence that already exists in the database with the majority of sequences coming from genome sequencing projects. We have created a new proteome identifier that uniquely identifies a particular assembly of a species and strain or subspecies to help users track the provenance of sequences. We present a new website that has been designed using a user-experience design process. We have introduced an annotation score for all entries in UniProt to represent the relative amount of knowledge known about each protein. These scores will be helpful in identifying which proteins are the best characterized and most informative for comparative analysis. All UniProt data is provided freely and is available on the web at http://www.uniprot.org/. Homepage: https://www.ncbi.nlm.nih.gov/pubmed/25348405 Related Software: BLAST; PSI-BLAST; KEGG; Pfam; Cd-hit; ClustalW; Pse-in-One; LIBSVM; Cell-PLoc; MUSCLE; iRSpot-PseDNC; R; EMBOSS; Cytoscape; MetaCyc; iPTM-mLys; PseKNC; iRNA-PseColl; Biopython; IntAct Cited in: 76 Publications Standard Articles 1 Publication describing the Software Year The universal protein resource (UniProt). 2007 all top 5 Cited by 270 Authors 2 Ding, Hui 2 Du, Pufeng 2 Hu, Zhangzhi 2 Kumar, Ravindra 2 Lin, Hao 2 Radivojac, Predrag 2 Srivastava, Abhishikha 2 Wu, Cathy H. 1 Acharyya, Amit 1 Ahmad, Saeed 1 Al Ayoubi, Baydaa 1 Alanis-Lobato, Gregorio 1 Ali, Hesham H. 1 An, Ji-Yong 1 Andersen, Jørgen Ellegaard 1 Andrade-Navarro, Miguel A. 1 Angelopoulos, Nicos 1 Åstrand, Mia 1 Banach, Mateusz 1 Bannink, Andre 1 Barker, Winona C. 1 Barrat-Charlaix, Pierre 1 Barton, John P. 1 Bastola, Dhundy R. 1 Baurley, James 1 Bequette, B. J. 1 Bhardwaj, Swati 1 Bian, Yong-Tao 1 Bock, Mary Ellen 1 Bodén, Mikael 1 Boostani, Reza 1 Bucur, Ioan Gabriel 1 Buske, Fabian A. 1 Cai, Yudong 1 Cao, Shengjiao 1 Cao, Tianjie 1 Cao, Wei 1 Carbonell, Jaime G. 1 Chakraborty, Arup K. 1 Chen, Wei 1 Cho, Judy H. 1 Chou, Kuochen 1 Claassen, Tom 1 Clerc, Daryl G. 1 Cocco, Simona 1 Crompton, L. A. 1 Cuellar, Julia 1 Dauparas, Justas 1 de Farias, Sávio Torres 1 DeBlasio, Dan 1 Dehzangi, Abdollah 1 Deng, Xutao 1 Desai, Dhwani K. 1 Dhole, Kaustubh 1 Donachy, P. 1 Ebrahimi, Samaneh 1 Eggeling, Ralf 1 Ellis, Jules L. 1 Eulenstein, Oliver 1 Fan, Guoliang 1 Feng, Peng-Mian 1 Foster, J. Nathan 1 France, James 1 Friedberg, Iddo 1 Fuchs, Fabian B. 1 Gao, Xin 1 Gao, Yang 1 Garutti, Claudio 1 Gascuel, Olivier 1 Ge, Zhenyi 1 Geng, Huimin 1 Gopalakrishnan, Vanathi 1 Grimbs, Sergio 1 Groppe, Sven 1 Grosse, Ivo 1 Gu, Lichuan 1 Gudur, Venkateshwarlu Yellaswamy 1 Guerra, Concettina 1 Guo, Yanzhi 1 Guo, Yuxin 1 Hahn, Matthew W. 1 Hanigan, M. D. 1 Harmer, Terence J. 1 Hauswedell, Hannes 1 Hayat, Maqsood 1 He, Shiquan 1 Hermoso, Vincent 1 Heskes, Tom M. 1 Hirose, Osamu 1 Horrocks, Ian 1 Housworth, Elizabeth Ann 1 Hu, Minglei 1 Huang, Hongzhan 1 Husson, Adrien 1 Huynh-Thu, Vân Anh 1 Hytönen, Jukka 1 Iqbal, Nadeem 1 Isambert, Hervé 1 Jacquin, Hugo 1 Jia, Jianhua ...and 170 more Authors all top 5 Cited in 25 Serials 27 Journal of Theoretical Biology 7 Computational Biology and Chemistry 5 Mathematical Biosciences and Engineering 2 Theoretical Computer Science 2 Data Mining and Knowledge Discovery 2 Computational Biology 2 2 Methods in Molecular Biology 1 Artificial Intelligence 1 Communications on Pure and Applied Mathematics 1 Journal of Statistical Physics 1 Theoretical Population Biology 1 International Journal of Approximate Reasoning 1 Neural Networks 1 Machine Learning 1 Pattern Recognition 1 Statistical Applications in Genetics and Molecular Biology 1 Journal of Statistical Mechanics: Theory and Experiment 1 Iranian Journal of Fuzzy Systems 1 1 Computational & Mathematical Methods in Medicine 1 The Annals of Applied Statistics 1 Algorithms 1 MathematicS In Action 1 Modeling and Optimization in Science and Technologies all top 5 Cited in 10 Fields 66 Biology and other natural sciences (92-XX) 28 Computer science (68-XX) 17 Statistics (62-XX) 5 Combinatorics (05-XX) 4 Probability theory and stochastic processes (60-XX) 2 General and overarching topics; collections (00-XX) 2 Operations research, mathematical programming (90-XX) 1 Partial differential equations (35-XX) 1 Numerical analysis (65-XX) 1 Statistical mechanics, structure of matter (82-XX) Citations by Year