swMATH ID: 23051
Software Authors: Chaudhary R, Fernandez-Baca D, Burleigh JG
Description: MulRF is a platform-independent software program designed to infer species trees from incongruent multi-copy gene trees using a generalization of the Robinson-Foulds (RF) distance to multi-labeled trees. MulRF version 1.2 has following additional features: Weighted input gene trees for species tree search. Topological constraints on the inferred species tree. Automated execution of multiple replicates of tree search heuristic. MulRF distance of a given species tree from gene trees. Visualization of input/output trees. MulRF’s source code is availabel at https://github.com/ruchiherself/MulRFRepo.
Homepage: http://genome.cs.iastate.edu/CBL/MulRF/
Related Software: iGTP; ExaBayes; Bio++; INDELible; PHYLIP; RAxML; MrBayes; SplitsTree; pIQPNNI; BIONJ; ape; R; FastTree; FastMe; ASTRID; DupTree; TOPAL; CLANN; LDDist; SeqVis
Cited in: 3 Publications

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