MulRF swMATH ID: 23051 Software Authors: Chaudhary R, Fernandez-Baca D, Burleigh JG Description: MulRF is a platform-independent software program designed to infer species trees from incongruent multi-copy gene trees using a generalization of the Robinson-Foulds (RF) distance to multi-labeled trees. MulRF version 1.2 has following additional features: Weighted input gene trees for species tree search. Topological constraints on the inferred species tree. Automated execution of multiple replicates of tree search heuristic. MulRF distance of a given species tree from gene trees. Visualization of input/output trees. MulRF’s source code is availabel at https://github.com/ruchiherself/MulRFRepo. Homepage: http://genome.cs.iastate.edu/CBL/MulRF/ Related Software: iGTP; ExaBayes; Bio++; INDELible; PHYLIP; RAxML; MrBayes; SplitsTree; pIQPNNI; BIONJ; ape; R; FastTree; FastMe; ASTRID; DupTree; TOPAL; CLANN; LDDist; SeqVis Cited in: 3 Publications Cited by 4 Authors 2 Warnow, Tandy J. 1 Keith, Jonathan M. 1 Roddur, Mrinmoy Saha 1 Willson, James K. Cited in 2 Serials 1 Computational Biology 1 Methods in Molecular Biology Cited in 3 Fields 3 Biology and other natural sciences (92-XX) 2 General and overarching topics; collections (00-XX) 1 Operations research, mathematical programming (90-XX) Citations by Year