Bio2RDF swMATH ID: 23946 Software Authors: Belleau, Franc cois; Tourigny, Nicole; Good, Benjamin; Morissette, Jean Description: Bio2rdf : A semantic web atlas of post genomic knowledge about human and mouse. The Bio2RDF project uses a data integration approach based on semantic web rules to answer a broad question: What is known about the mouse and human genomes? Using its rdfizing services, a semantic mashup of 65 million triples was built from 30 public bioinformatics data providers: GO, NCBI, UniProt, KEGG, PDB and many others. The average link-rank (ALR) of a node is 4.7 which means that a usual topic is connected to 4.7 other topics by direct or reverse links within the warehouse. A knowledge map of the graph and descriptive statistics about its content are presented. A downloadable version of the Bio2RDF Atlas graph in N3 format is available at url{http://bio2rdf.org/download}. Homepage: http://bio2rdf.org/ Related Software: KEGG; DBpedia; ArrayExpress; STRING; PubChem; node2vec; SimRank; Orange4WS; PL-ranking; SEGS; SegMine; NCDawareRank; Fr-ONT; Biomine; NetSDM; Aleph; ABNER; PROSITE; PSI-BLAST; BioKleisli Cited in: 3 Documents Standard Articles 2 Publications describing the Software Year Bio2rdf release 2: Improved coverage, interoperability and provenance of life science linked data Callahan, Alison; Cruz-Toledo, José; Ansell, Peter; Dumontier, Michel 2013 Bio2rdf : A semantic web atlas of post genomic knowledge about human and mouse Belleau, François; Tourigny, Nicole; Good, Benjamin; Morissette, Jean 2008 all top 5 Cited by 7 Authors 1 Ertaylan, Gökhan 1 Hitzler, Pascal 1 Kralj, Jan 1 Lavrač, Nada 1 Lehmann, Jens 1 Robnik-Šikonja, Marko 1 Zaveri, Amrapali Cited in 3 Serials 1 Machine Learning 1 Journal of Machine Learning Research (JMLR) 1 Algorithms Cited in 2 Fields 3 Computer science (68-XX) 1 Statistics (62-XX) Citations by Year