GAP swMATH ID: 26294 Software Authors: Wu, H.; Tien, Y.; Chen, C. Description: GAP (generalized association plots): a graphical environment for matrix visualization and cluster analysis. GAP is a Java-designed exploratory data analysis (EDA) software for matrix visualization (MV) and clustering of high-dimensional data sets. It provides direct visual perception for exploring structures of a given data matrix and its corresponding proximity matrices, for variables and subjects. Various matrix permutation algorithms and clustering methods with validation indices are implemented for extracting embedded information. GAP has a friendly graphical user interface for easy handling of data and proximity matrices. It is more powerful and effective than conventional graphical methods when dimension reduction techniques fail or when data is of ordinal, binary, and nominal type. Homepage: http://gap.stat.sinica.edu.tw/Software/GAP/ Related Software: seriation; PermutMatrix; R; UCI-ml; ggplot2; Silhouettes; PRMLT; ElemStatLearn; AS 136; iheatmapr; ComplexHeatmap; t-SNE; pheatmap; Superheat; heatmaply; word2vec; ColorBrewer; NMF; NodeTrix; PAST Cited in: 18 Documents Standard Articles 2 Publications describing the Software, including 2 Publications in zbMATH Year GAP: a graphical environment for matrix visualization and cluster analysis. Zbl 1464.62013Wu, Han-Ming; Tien, Yin-Jing; Chen, Chun-Houh 2010 Generalized association plots: Information visualization via iteratively generated correlation matrices. Zbl 1027.62047Chen, Chun-Houh 2002 all top 5 Cited by 39 Authors 4 Chen, Chun-Houh 3 Wu, Hanming 2 Tien, Yin-Jing 1 Adhikari, Prem Raj 1 Antoch, Jaromír 1 Barter, Rebecca L. 1 Berry, Michael W. 1 Chang, Shun-Chuan 1 Chen, Hsin 1 Chen, Ting-Li 1 Chepoi, Victor D. 1 Chi, Yueh-Yun 1 Gatu, Cristian 1 Ghandehari, Mahya 1 Gosnell, Denise K. 1 Hahsler, Michael 1 Hollmén, Jaakko 1 Janssen, Jeannette C. M. 1 Kao, Chiun-How 1 Kaski, Samuel 1 Kralj, Jan 1 Lavrač, Nada 1 Liiv, Innar 1 McCullough, B. D. 1 Nakano, Junji 1 Ouyoung, Chih-Wen 1 Peltonen, Jaakko 1 Prchal, Luboš 1 Sarda, Pascal 1 Seston, Morgan 1 Shieh, Sheau-Hue 1 Shiu, Shang-Ying 1 Vavpetič, Anže 1 Venna, Jarkko 1 Vigneron, Vincent 1 Wittek, Peter 1 Yang, Chuan-Kai 1 Yao, Wei-Ting 1 Yu, Bin all top 5 Cited in 13 Serials 5 Computational Statistics and Data Analysis 1 Journal of Classification 1 Algorithmica 1 SIAM Journal on Discrete Mathematics 1 Machine Learning 1 European Journal of Operational Research 1 Journal of Statistical Computation and Simulation 1 Numerical Linear Algebra with Applications 1 Statistica Sinica 1 PAA. Pattern Analysis and Applications 1 Statistical Analysis and Data Mining 1 Journal of Computational and Graphical Statistics 1 Statistics and Computing all top 5 Cited in 6 Fields 15 Statistics (62-XX) 6 Computer science (68-XX) 2 Combinatorics (05-XX) 1 General and overarching topics; collections (00-XX) 1 Operations research, mathematical programming (90-XX) 1 Game theory, economics, finance, and other social and behavioral sciences (91-XX) Citations by Year