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AAindex

swMATH ID:	26861
Software Authors:	Kawashima, S.; Kanehisa, M.
Description:	AAindex: amino acid index database. AAindex is a database of numerical indices representing various physicochemical and biochemical properties of amino acids and pairs of amino acids. It consists of two sections: AAindex1 for the amino acid index of 20 numerical values and AAindex2 for the amino acid mutation matrix of 210 numerical values. Each entry of either AAindex1 or AAindex2 consists of the definition, the reference information, a list of related entries in terms of the correlation coefficient, and the actual data. The database may be accessed through the DBGET/LinkDB system at GenomeNet (http://www.genome.ad. jp/dbget/) or may be downloaded by anonymous FTP (ftp://ftp.genome. ad.jp/db/genomenet/aaindex/)
Homepage:	https://www.ncbi.nlm.nih.gov/pubmed/9847231
Related Software:	iRSpot-PseDNC; LIBSVM; Cell-PLoc; BLAST; PSI-BLAST; Memtype-2L; Pse-in-One; iSNO-AAPair; PseKNC; PseAAC-Builder; iNuc-PseKNC; iSNO-PseAAC; propy; PseAAC; iLoc-Euk; Signal-CF; R; iPTM-mLys; PseAAC-General; UniProt
Cited in:	35 Publications

all top 5

4	Brahnam, Sheryl
4	Lumini, Alessandra
4	Nanni, Loris
3	Du, Pufeng
2	Bannai, Hideo
2	Georgiou, Dimitrios N.
2	Jiao, Ya-Sen
2	Karakasidis, Theodoros E.
2	Nieto Roig, Juan Jose
2	Torres, Angela
1	Aguilar-Ruiz, Jesus Salvador
1	Ahmad, Shandar
1	Akutsu, Tatsuya
1	Altermark, Bjørn
1	Anh, Vo V.
1	Aoki-Kinoshita, Kiyoko F.
1	Arango-Argoty, G. A.
1	Araúzo-Bravo, Marcos J.
1	Asencio-Cortes, Gualberto
1	Bang, Sung Yang
1	Brockmann, Gudrun A.
1	Castellanos-Domínguez, Germán
1	Chen, Yen-Kuang
1	Ching, Wai-Ki
1	Choi, Seungjin
1	Chou, Kuochen
1	Ding, Yongsheng
1	Divina, Federico
1	Elyasi, Maryam
1	Fink, Gernot A.
1	Fokianos, Konstantinos
1	Francisco, Alexandre P.
1	Gao, Yang
1	Han, Guosheng
1	Hayat, Sikander
1	Helms, Volkhard
1	Hemmateenejad, Bahram
1	Henriques, Rui
1	Jaramillo-Garzón, J. A.
1	Jiang, Hao
1	Ju, Zhe
1	Khorsand, Babak
1	Kim, Jong Kyoung
1	Knisley, Debra J.
1	Knisley, Jeff R.
1	Li, Guangping
1	Li, Kuo-Bin
1	Li, Limin
1	Li, Tao
1	Liang, Yunyun
1	Ludwig, Arne
1	Lv, Yingli
1	Ma, Xin
1	Ma, Zhiqiang
1	Marquez-Chamorro, Alfonso Eduardo
1	Miri, Ramin
1	Miyano, Satoru
1	Moe, Elin
1	Naghibzadeh, Mahmoud
1	Nattkemper, Tim W.
1	Ning, Qiao
1	Ögel, Z. B.
1	Ott, Sascha
1	Park, Yungki
1	Pavesi, Angelo
1	Plötz, Thomas
1	Promponas, Vasilis J.
1	Russo, Luís M. S.
1	Sarai, Akinori
1	Savadi, Abdorreza
1	Scherbart, Alexandra
1	Schmitt, Armin O.
1	Schuchhardt, Johannes
1	Shi, Jianyu
1	Smalås, Arne O.
1	Sun, Xiao
1	Thorvaldsen, Steinar
1	Wang, Jun
1	Wang, Shiyun
1	Weber, Gerhard-Wilhelm
1	Willassen, Nils P.
1	Yang, Lei
1	Yu, Zuguo
1	Zahiri, Javad
1	Zhang, Shengli
1	Zhang, Tongliang
1	Zhao, Xiaowei
1	Zhou, Yuan-Ke
1	Zuo, Yongchun

all top 5

21	Journal of Theoretical Biology
4	Computational Biology and Chemistry
2	Discrete Applied Mathematics
2	Pattern Recognition
1	Journal of Time Series Analysis
1	Neural Networks
1	PAA. Pattern Analysis and Applications
1	Journal of Systems Science and Complexity
1	Mathematical Biosciences and Engineering

all top 5

30	Biology and other natural sciences (92-XX)
15	Computer science (68-XX)
10	Statistics (62-XX)
1	Mathematical logic and foundations (03-XX)
1	Combinatorics (05-XX)
1	Harmonic analysis on Euclidean spaces (42-XX)
1	Operations research, mathematical programming (90-XX)
1	Information and communication theory, circuits (94-XX)