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pdbmine

swMATH ID: 28295
Software Authors: Newlyn N. Joseph, Raktim N. Roy, Thomas A. Steitz
Description: pdbmine: A Node.js API for the RCSB Protein Data Bank (PDB). The advent of Web-based tools that assist in the analysis and visualization of macromolecules require application programming interfaces (APIs) designed for modern web frameworks. To this end, we have developed a Node.js module pdbmine that allows any user to generate faster data-request queries to the RCSB Protein Data Bank (PDB). This JavaScript API acts as a layer over the XML-based RCSB PDB RESTful API. The relatively simple nature of the function calls within this module allows the user to easily implement and integrate pdbmine into larger Node.js web applications.
Homepage: https://arxiv.org/abs/1904.03801
Source Code: https://github.com/nnj1/pdbmine/
Dependencies: JavaScript; Node.js
Keywords: Genomics; arXiv_q-bio.GN; Node.js API; RCSB; Protein Data Bank; JavaScript
Related Software: Node.js; JavaScript
Cited in: 0 Publications

Standard Articles

1 Publication describing the Software Year
pdbmine: A Node.js API for the RCSB Protein Data Bank (PDB)
Newlyn N. Joseph, Raktim N. Roy, Thomas A. Steitz
2019