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PyBoolNet

swMATH ID: 35161
Software Authors: Hannes Klarner, Adam Streck, Heike Siebert
Description: PyBoolNet: a python package for the generation, analysis and visualization of boolean networks. Results: PYBOOLNET is a Python package for working with Boolean networks that supports simple access to model checking via NUSMV, standard graph algorithms via NETWORKX and visualization via DOT. In addition, state of the art attractor computation exploiting POTASSCO ASP is implemented. The package is function-based and uses only native Python and NETWORKX data types.
Homepage: https://academic.oup.com/bioinformatics/article/33/5/770/2725550
Source Code: https://github.com/hklarner/PyBoolNet
Dependencies: python
Related Software: Ginsim; BoolNet; Pint; BioLQM; usefun; MaBoSS; Cellnoptr; R; emba; Cytoscape.js; ATLANTIS; Aeon; ASSA-PBN; BioModelAnalyzer; NuSMV; CoLoMoTo; SQUAD; ERODE; z3
Cited in: 3 Publications

Cited in 0 Serials

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