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SEGID

swMATH ID: 35743
Software Authors: Wang, L.; Xu, Y.
Description: SEGID: Identifying Interesting Segments in (Multiple) Sequence Alignments. Summary: SEGID is a tool for finding conserved regions (regions of high scores) for a given (multiple) sequence alignment. It takes a (multiple) sequence alignment as its input and converts the alignment into a sequence of numbers, where each number is the alignment score of a column. Three algorithms are used to identify regions of high scores. A graphical interface is provided to present those identified regions. Availability: Free from http://www.cs.cityu.edu.hk/ lwang/segid/subject to copyright restrictions.
Homepage: https://academic.oup.com/bioinformatics/article/19/2/297/372772
Dependencies: Java
Related Software: MAVG; WebGestalt
Referenced in: 8 Publications

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