SBMLDiagrams swMATH ID: 41894 Software Authors: Jin Xu, Jessie Jiang, Herbert M. Sauro Description: SBMLDiagrams: A python package to process and visualize SBML layout and render. The Systems Biology Markup Language (SBML) is an extensible standard format for exchanging biochemical models. One of the extensions for SBML is the SBML Layout and Render package. This allows modelers to describe a biochemical model as a pathway diagram. However, up to now there has been little support to help users easily add and retrieve such information from SBML. In this application note we describe a new Python package called SBMLDiagrams. This package allows a user to add layout and render information or retrieve it using a straight forward Python API. The package uses skia-python to support rendering of the diagrams, allowing export to commons formats such as PNG or PDF. Availability: SBMLDiagrams is publicly available and licensed under the liberal MIT open-source license. The package is available for all major platforms. The source code has been deposited at GitHub (this http URL). Users can install the package using the standard pip installation mechanism: pip install SBMLDiagrams. Availability: SBMLDiagrams is publicly available and licensed under the liberal MIT open-source license. The package is available for all major platforms. The source code has been deposited at GitHub (this http URL). Users can install the package using the standard pip installation mechanism: pip install SBMLDiagrams. Contact: hsauro@uw.edu. Homepage: https://arxiv.org/abs/2204.12611 Source Code: https://github.com/sys-bio/sbmldiagrams Dependencies: Python Keywords: Quantitative Methods; arXiv_q-bio.QM; SBMLDiagrams; Python; SBML; Systems Biology Markup Language; biochemical model Related Software: libSBML; SimpleSBML; Python Cited in: 0 Publications Standard Articles 1 Publication describing the Software Year SBMLDiagrams: A python package to process and visualize SBML layout and render Jin Xu, Jessie Jiang, Herbert M. Sauro 2022