swMATH ID: 42479
Software Authors: Edward W. J. Wallace; Samuel J. Haynes
Description: tidyqpcr: Quantitative PCR analysis in the tidyverse. Quantitative polymerase chain reaction (qPCR) is a fundamental technique in molecular biology to detect and quantify DNA and RNA. Here we present the tidyqpcr software package for user-friendly qPCR analysis using the tidyverse suite of R packages. tidyqpcr offers a consistent user interface and structure for qPCR analysis, within the tidyverse paradigm of spreadsheet-like rectangular data frames and generic functions that build up complex analyses in a series of simple steps. tidyqpcr focuses on experimental design in microwell plates, and relative quantification using changes in quantification cycle (∆Cq). Overall, tidyqpcr empowers scientists to conduct reproducible, flexible, and best-practice compliant quantitative PCR analysis.
Homepage: https://www.theoj.org/joss-papers/joss.04507/10.21105.joss.04507.pdf
Source Code:  https://github.com/ropensci/tidyqpcr
Dependencies: R
Keywords: tidyqpcr; Quantitative PCR analysis; Journal of Open Source Software; JOSS; R; R package; tidyverse; Quantitative polymerase chain reaction; qPCR
Related Software: qpcR; NormqPCR; ReadqPCR; HTqPCR; pcr; ggplot2; R
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