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Asgan

swMATH ID: 43145
Software Authors: Polevikov, Evgeny; Kolmogorov, Mikhail
Description: Asgan – Assembly Graphs Analyzer – is a tool for analysis of assembly graphs. The tool takes two assembly graphs in the GFA format as input and finds the minimum set of homologous sequences (synteny paths) shared between the graphs. As output, Asgan produces various statistics and a visualization of the found paths.
Homepage: https://drops.dagstuhl.de/opus/volltexte/2019/11054/
Source Code:  https://github.com/epolevikov/Asgan
Dependencies: Python
Related Software: Sibelia; CAMSA; hybridSPAdes; GTED; HINGE; Canu; Bandage; Unicycler; AGB; PathRacer; CYNTENATOR; i-ADHoRe; Minimap2; dipSPAdes; SPAdes
Cited in: 1 Document

Cited in 0 Serials

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