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kgp

swMATH ID: 43471
Software Authors: Stephen Turner
Description: R package kgp: 1000 Genomes Project Metadata. Metadata about populations and data about samples from the 1000 Genomes Project, including the 2,504 samples sequenced for the Phase 3 release and the expanded collection of 3,202 samples with 602 additional trios. The data is described in Auton et al. (2015) <doi:10.1038/nature15393> and Byrska-Bishop et al. (2022) <doi:10.1016/j.cell.2022.08.004>, and raw data is available at <http://ftp.1000genomes.ebi.ac.uk/vol1/ftp/>. See Turner (2022) <doi:10.48550/arXiv.2210.00539> for more details.
Homepage: https://cran.r-project.org/web/packages/kgp/index.html
Source Code: https://github.com/cran/kgp
Dependencies: R
Keywords: R; R package; kgp; 1000 Genomes Project; Metadata; arXiv_q-bio.GN; Population genetics
Related Software: pedtools; ggplot2; leaflet; pedsuite; skater; tidyverse; kinship2; R; CRAN
Cited in: 0 Publications

Standard Articles

1 Publication describing the Software Year
KGP: An R Package with Metadata from the 1000 Genomes Project
Stephen Turner
2022