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BioJava

swMATH ID: 5334
Software Authors: Andreas Prlic; Andrew Yates; Spencer E. Bliven; Peter W. Rose; Julius Jacobsen; Peter V. Troshin; Mark Chapman; Jianjiong Gao; Chuan Hock Koh; Sylvain Foisy; Richard Holland; Gediminas Rimsa; Michael L. Heuer; H. Brandstatter-Muller; Philip E. Bourne; Scooter Willis
Description: BioJava aims to provide a comprehensive set of Java components for the rapid development of applications in Bioinformatics. It contains interfaces for representing Sequences, Features, and other important bioinformatics concepts. It can also read and write sequence data in a variety of common formats and communicate with Ensembl databases and with DAS and BioCorba servers.
Homepage: http://biojava.org/wiki/Main_Page
Programming Languages: Java
Keywords: Scientific/Engineering; Artificial Intelligence; Bioinformatics; Chemistry; Mathematics; Visualization; Software Development; Libraries
Related Software: Biopython; bioperl; MMTK; ProDy; Python; Taverna; DendroPy; PyMOL; MrBayes; BMGE; Bio++; Jalview; PatternHunter; MUMMER; TRANSFAC; Cd-hit; T-coffee; Kalign; MUSCLE; LAGAN
Referenced in: 5 Publications

Referencing Publications by Year