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MAFFT

swMATH ID:	8304
Software Authors:	Katoh K., Misawa K., Kuma K., Miyata T.
Description:	MAFFT: Multiple alignment program for amino acid or nucleotide sequences. MAFFT is a multiple sequence alignment program for unix-like operating systems. It offers a range of multiple alignment methods, L-INS-i (accurate; for alignment of <∼200 sequences), FFT-NS-2 (fast; for alignment of <∼10,000 sequences), etc.
Homepage:	http://mafft.cbrc.jp/alignment/software/
Related Software:	MUSCLE; ClustalW; T-coffee; ProbCons; DIALIGN; Clustal X; MrBayes; R; PAML; PSI-BLAST; CLUSTAL; Kalign; Balibase; ape; BLAST; Probalign; Pfam; PHYLIP; PAUP*; SABmark
Cited in:	26 Publications

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2	Daskalakis, Constantinos
2	Keith, Jonathan M.
2	Roch, Sébastien
1	Althaus, Ernst
1	Amiri, Saeid
1	Andoni, Alexandr
1	Arribas-Gil, Ana
1	Axelson-Fisk, Marina
1	Batzoglou, Serafim
1	Berkemer, Sarah J.
1	Boys, Richard J.
1	Canzar, Stefan
1	Carugo, Oliviero
1	Clarke, Bertrand S.
1	Clarke, Jennifer Lynn
1	Coti, Camille
1	Crawford, Lorin
1	Cresswell-Clay, Evan
1	Daugelaite, Jurate
1	DeBlasio, Dan
1	Do, Chuong B.
1	Du, Zhihua
1	Eisenhaber, Frank
1	Embley, T. Martin
1	Fan, Xiaodan
1	Girimurugan, Senthil Balaji
1	Gross, Samuel S.
1	Guo, Xuan
1	Hassidim, Avinatan
1	Heaps, Sarah E.
1	Hendriksen, Michael
1	Höner zu Siederdissen, Christian
1	Huang, Hsin-Hsiung
1	Kališnik Verovšek, Sara
1	Kapust, Nils
1	Kececioglu, John D.
1	Lárraga-Ramírez, María E.
1	Lin, Feng
1	Liu, Jun S.
1	Matias, Catherine
1	Monod, Anthea
1	Mora-Gutiérrez, Roman Anselmo
1	Nguyen, Ken
1	Nye, Tom M. W.
1	O’Driscoll, Aisling
1	Pan, Yi
1	Paradis, Emmanuel
1	Patiño-Galindo, Juan Ángel
1	Peng, Hui
1	Periwal, Vipul
1	Pesch, Robert
1	Petrucci, Laure
1	Ponsich, Antonin S.
1	Ramírez-Rodríguez, Javier
1	Rincón-García, Eric Alfredo
1	Rodríguez, César Marín
1	Sleator, Roy D.
1	Sousa, Marcelo S.
1	Stadler, Peter F.
1	Wang, Lei
1	Williams, Tom A.
1	Yuan, Yuan
1	Zheng, Jinhua

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3	Statistical Applications in Genetics and Molecular Biology
3	Methods in Molecular Biology
2	Computational Biology
1	Mathematical Biosciences
1	Bulletin of Mathematical Biology
1	Computing
1	Statistical Science
1	The Annals of Applied Probability
1	Stochastic Processes and their Applications
1	Formal Methods in System Design
1	Journal of Combinatorial Optimization
1	Computational Biology and Chemistry
1	Mathematics in Computer Science
1	Computational & Mathematical Methods in Medicine
1	Journal of Computational and Graphical Statistics
1	ISRN Biomathematics
1	SIAM Journal on Applied Algebra and Geometry
1	Use R!

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8	Statistics (62-XX)
5	Probability theory and stochastic processes (60-XX)
3	Computer science (68-XX)
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2	General and overarching topics; collections (00-XX)
1	History and biography (01-XX)
1	Algebraic geometry (14-XX)
1	Algebraic topology (55-XX)