MAFFT swMATH ID: 8304 Software Authors: Katoh, K.; Misawa, K.; Kuma, K.; Miyata, T. Description: MAFFT: Multiple alignment program for amino acid or nucleotide sequences. MAFFT is a multiple sequence alignment program for unix-like operating systems. It offers a range of multiple alignment methods, L-INS-i (accurate; for alignment of <∼200 sequences), FFT-NS-2 (fast; for alignment of <∼10,000 sequences), etc. Homepage: http://mafft.cbrc.jp/alignment/software/ Related Software: MUSCLE; ClustalW; T-coffee; ProbCons; DIALIGN; Clustal X; MrBayes; Balibase; Kalign; R; CLUSTAL; Probalign; PAML; PSI-BLAST; RAxML; MUMMALS; ape; BLAST; Pfam; PHYLIP Cited in: 32 Documents all top 5 Cited by 84 Authors 2 Daskalakis, Constantinos 2 Keith, Jonathan M. 2 Roch, Sébastien 1 Ai, Liang 1 Althaus, Ernst 1 Amiri, Saeid 1 Andoni, Alexandr 1 Arribas-Gil, Ana 1 Axelson-Fisk, Marina 1 Batzoglou, Serafim 1 Benito, Sergio 1 Berkemer, Sarah J. 1 Boys, Richard J. 1 Calvet, Laura 1 Canzar, Stefan 1 Carugo, Oliviero 1 Clarke, Bertrand S. 1 Clarke, Jennifer Lynn 1 Coti, Camille 1 Crawford, Lorin 1 Cresswell-Clay, Evan 1 Dabba, Ali 1 Daugelaite, Jurate 1 DeBlasio, Dan 1 Do, Chuong B. 1 Du, Zhihua 1 Eisenhaber, Frank 1 Embley, T. Martin 1 Fan, Xiaodan 1 Feng, Jie 1 Ganesh, Arun 1 Girimurugan, Senthil Balaji 1 Gross, Samuel S. 1 Guo, Xuan 1 Hassidim, Avinatan 1 Heaps, Sarah E. 1 Hendriksen, Michael 1 Hirn, Matthew J. 1 Höner zu Siederdissen, Christian 1 Huang, Hsin-Hsiung 1 Huang, Jessie 1 Huguet, Guillaume 1 Juan, Angel A. 1 Kališnik Verovšek, Sara 1 Kapust, Nils 1 Kececioglu, John D. 1 Krishnaswamy, Smita 1 Kuchroo, Manik 1 Lárraga-Ramírez, María E. 1 Lin, Feng 1 Liu, Jun S. 1 Matias, Catherine 1 Monod, Anthea 1 Mora-Gutiérrez, Roman Anselmo 1 Nguyen, Ken 1 Nye, Tom M. W. 1 O’Driscoll, Aisling 1 Pan, Yi 1 Paradis, Emmanuel 1 Patiño-Galindo, Juan Ángel 1 Peng, Hui 1 Periwal, Vipul 1 Pesch, Robert 1 Petrucci, Laure 1 Ponsich, Antonin S. 1 Prados, Ferran 1 Ramírez-Rodríguez, Javier 1 Rieck, Bastian 1 Rincón-García, Eric Alfredo 1 Rodríguez, César Marín 1 Sleator, Roy D. 1 Sousa, Marcelo S. 1 Stadler, Peter F. 1 Susko, Edward 1 Sy, Aaron 1 Tari, Abdelkamel 1 Tong, Alexander 1 Wang, Lei 1 Williams, Tom A. 1 Wolf, Guy 1 Yao, Yuhua 1 Yuan, Yuan 1 Zheng, Jinhua 1 Zouache, Djaafar all top 5 Cited in 23 Serials 3 Statistical Applications in Genetics and Molecular Biology 3 Methods in Molecular Biology 2 Computational Biology 1 The Canadian Journal of Statistics 1 Mathematical Biosciences 1 Bulletin of Mathematical Biology 1 Computing 1 Statistical Science 1 The Annals of Applied Probability 1 Stochastic Processes and their Applications 1 Formal Methods in System Design 1 International Transactions in Operational Research 1 Journal of Combinatorial Optimization 1 MATCH - Communications in Mathematical and in Computer Chemistry 1 Computational Biology and Chemistry 1 Mathematics in Computer Science 1 Computational & Mathematical Methods in Medicine 1 Journal of Computational and Graphical Statistics 1 ISRN Biomathematics 1 SIAM Journal on Applied Algebra and Geometry 1 Use R! 1 SIAM Journal on Mathematics of Data Science 1 INFOR: Information Systems and Operational Research all top 5 Cited in 12 Fields 25 Biology and other natural sciences (92-XX) 10 Statistics (62-XX) 6 Operations research, mathematical programming (90-XX) 5 Probability theory and stochastic processes (60-XX) 3 Computer science (68-XX) 2 General and overarching topics; collections (00-XX) 2 Algebraic topology (55-XX) 1 History and biography (01-XX) 1 Order, lattices, ordered algebraic structures (06-XX) 1 Algebraic geometry (14-XX) 1 Dynamical systems and ergodic theory (37-XX) 1 Manifolds and cell complexes (57-XX) Citations by Year