swMATH ID: 932
Software Authors: Michael Höhle, Sebastian Meyer, Michaela Paul, Andrea Riebler, S. Steiner, M. Virtanen, Valentin Wimmer, T. Correa, M. Hofmann, C. Lang
Description: R package surveillance: Temporal and Spatio-Temporal Modeling and Monitoring of Epidemic Phenomena: The intention of the R-package surveillance is to provide open source software for the temporal and spatio-temporal visualization, modelling and monitoring of epidemic phenomena. This includes count, binary and categorical data time series as well as continuous-time processes having discrete or continuous spatial resolution.
Homepage: http://cran.r-project.org/web/packages/surveillance/
Source Code:  https://github.com/cran/Surveillance
Programming Languages: C++, R
Operating Systems: Linux, Windows
Dependencies: R, methods, utils, xtable, spc, sp, maptools, vcd, msm, Matrix
Keywords: monitoring; public health surveillance; time series of counts; outbreak detection; univariate and multivariate surveillance
Related Software: R; SurvStat@RKI; maptools; GMRFLib; EpiEstim; epinet; CODA; ergm; R0; gamair; spacetime; EpiModel; xts; CRAN Task Views; tscount; SaTScan; spc; hergm; statnet; Bergm
Cited in: 30 Documents

Standard Articles

4 Publications describing the Software, including 2 Publications in zbMATH Year
Spatio-Temporal Analysis of Epidemic Phenomena Using the R Package surveillance Link
Sebastian Meyer and Leonhard Held and Michael Höhle
Monitoring Count Time Series in R: Aberration Detection in Public Health Surveillance Link
Maëlle Salmon; Dirk Schumacher; Michael Höhle
Bayesian outbreak detection in the presence of reporting delays. Zbl 1386.62065
Salmon, Maëlle; Schumacher, Dirk; Stark, Klaus; Höhle, Michael
Surveillance: An R package for the monitoring of infectious diseases. Zbl 1186.62004
Höhle, Michael

Citations by Year