AutoDock swMATH ID: 9659 Software Authors: The Scripps Research Institute; Morris, G. M.; Huey, R.; Lindstrom, W.; Sanner, M. F.; Belew, R. K.; Goodsell, D. S.; Olson, A. J. Description: AutoDock is a suite of automated docking tools. It is designed to predict how small molecules, such as substrates or drug candidates, bind to a receptor of known 3D structure. Current distributions of AutoDock consist of two generations of software: AutoDock 4 and AutoDock Vina. AutoDock 4 actually consists of two main programs: autodock performs the docking of the ligand to a set of grids describing the target protein; autogrid pre-calculates these grids. In addition to using them for docking, the atomic affinity grids can be visualised. This can help, for example, to guide organic synthetic chemists design better binders. Homepage: http://autodock.scripps.edu/ Related Software: DOCK; Chimera; ParaDisEO; AutoDock Vina; KEGG; Matlab; R; DeepVS; BLAST; PSI-BLAST; CHARMM; Globus Toolkit; PROCHECK; TRANSFAC; ABINIT-MP; PEACH; GAMESS; truncnorm; snow; MATEDA Cited in: 22 Publications all top 5 Cited by 79 Authors 1 Ahmed, Sajid 1 Aita, Takuyo 1 Aizawa, Masahiro 1 Al-Bluwi, Ibrahim 1 Amari, Shinji 1 Andonov, Anton 1 Arzberger, Peter W. 1 Bhak, Jong 1 Bubenik, Peter 1 Cao, Tongcheng 1 Chan, Huah Yong 1 Chen, Zhiguo 1 Chou, Kuochen 1 Cortés López, Juan Carlos 1 Dehzangi, Abdollah 1 Ding, Zhaohui 1 Durrant, Jacob D. 1 Ellenberger, Sabrina 1 Farid, Dewan Md 1 Fatemi, Mohammad H. 1 Fu, Yi 1 Gharaghani, Sajjad 1 He, Runtao 1 Heidari, Afsane 1 Heo, Giseon 1 Horvath, Dragos 1 Howlin, Brendan J. 1 Husimi, Yuzuru 1 Iwasawa, Yoshio 1 Jang, Shi-Shang 1 Jia, Ning 1 Kim, Chongmin 1 Kim, Deok-Soo 1 Kim, Jaekwan 1 Kokosy, Annemarie 1 Kovacev-Nikolic, Violeta 1 Lampariello, Francesco 1 Li, Aixiu 1 Li, Tonghua 1 Li, Wilfred W. 1 Liuzzi, Giampaolo 1 Luo, Yuan 1 Ma, Da 1 Ma, Shoufeng 1 McCammon, J. Andrew 1 Melab, Nouredine 1 Nakano, Tatsuya 1 Nakata, Kotoko 1 Nikolić, Dragan 1 Nishigaki, Koichi 1 Palmer, Rex A. 1 Parent, Benjamin 1 Potter, Brian S. 1 Qi, Hang 1 Rayhan, Farshid 1 Ryu, Joonghyun 1 Saldanha, José W. 1 Schuster, Stefan 1 Shatabda, Swakkhar 1 Siméon, Thierry 1 Talbi, El-Ghazali 1 Tanczos, Anna C. 1 Tantar, Alexandru-Adrian 1 Tantoso, Erwin 1 Wahab, Habibah A. 1 Wang, Chunfang 1 Wang, Guangchao 1 Wei, Dongqing 1 Wei, Huachun 1 Wei, Xiaohui 1 Wolters, Hans J. 1 Won, Chungin 1 Wöstemeyer, Johannes 1 Yap, Yeleng 1 Yeh, Chen-Wei 1 Zhang, Junwei 1 Zhang, Rui 1 Zhang, Xuewu 1 Zheng, Huiqin all top 5 Cited in 9 Serials 6 Computational Biology and Chemistry 6 Journal of Theoretical Biology 2 New Generation Computing 2 Soft Computing 1 Journal of Optimization Theory and Applications 1 Computer Aided Geometric Design 1 Journal of Global Optimization 1 Statistical Applications in Genetics and Molecular Biology 1 Computer Science Review all top 5 Cited in 6 Fields 15 Biology and other natural sciences (92-XX) 10 Computer science (68-XX) 5 Operations research, mathematical programming (90-XX) 2 Statistics (62-XX) 1 Game theory, economics, finance, and other social and behavioral sciences (91-XX) 1 Information and communication theory, circuits (94-XX) Citations by Year