Fiji swMATH ID: 9754 Software Authors: Schindelin, J., et al Description: Fiji: an open-source platform for biological-image analysis. Fiji is a distribution of the popular open-source software ImageJ focused on biological-image analysis. Fiji uses modern software engineering practices to combine powerful software libraries with a broad range of scripting languages to enable rapid prototyping of image-processing algorithms. Fiji facilitates the transformation of new algorithms into ImageJ plugins that can be shared with end users through an integrated update system. We propose Fiji as a platform for productive collaboration between computer science and biology research communities Homepage: http://fiji.sc/Fiji Related Software: ImageJ; Python; Scikit; CellProfiler; R; COMSOL; GitHub; GIMP; FFTW; DAKOTA; EJ-HEAT; scikit-image; LibTIFF; OpenGL; TomoWarp2; iMorph; TauFactor; PuMA; bmiptools; Amira Cited in: 24 Publications all top 5 Cited by 96 Authors 4 Roose, Tiina 3 Cooper, Laura J. 2 Bengough, Anthony G. 2 Clough, Geraldine F. 2 Ganapathisubramani, Bharathram 2 George, T. S. 2 Jawerth, Louise M. 1 Agosti, Abramo 1 An, Fengping 1 Bakula, Marina 1 Bendszus, Martin 1 Bijelić, Nikola 1 Blažíková, Michaela 1 Bode, Julia 1 Boudina, Mouad 1 Breckwoldt, Michael O. 1 Buschle, Lukas R. 1 Čapek, Martin 1 Chmelová, Helena 1 Ciarletta, Pasquale 1 Ciocanel, Maria-Veronica 1 Conversano, Claudio 1 Cwikel, Michael 1 Daly, Keith R. 1 Darzacq, Xavier 1 De La Fuente Canto, C. 1 Dupuy, Lionel Xavier 1 Escande, Paul 1 Etienne, Stéphane 1 Ford, Matthew J. 1 Frazier, Michael W. 1 Frigau, Luca 1 Gabitto, Mariano I. 1 Gosselin, Frédérick P. 1 Gramacki, Artur 1 Grgac, Robert 1 Hahn, Artur 1 Halim, Abdul Hakim 1 Hallett, P. D. 1 Heiland, Sabine 1 Heppell, James P. 1 Horváth, Ondrej 1 Janáček, Jiří 1 Jeschonek, Samantha P. 1 Jordan, Michael Irwin 1 Kalogiros, D. I. 1 Kampf, Thomas 1 Kawamura, Mari 1 Keyes, Samuel David 1 Koebernick, N. 1 Korbicz, Józef 1 Korvin, Gabor 1 Kowal, Marek 1 Krüwel, Thomas 1 Kurz, Felix T. 1 Liu, Zhiwen 1 Marchesi, Simone 1 Marie-Nelly, Herve 1 Milman, Mario Marcos 1 Miura, Takashi 1 Mola, Francesco 1 Mort, Richard L. 1 Mowry, Kimberly L. 1 Nestler, Michael 1 Novotný, Ivan 1 Ogawa, Toshiyuki 1 Oršolić, Nada 1 Pakman, Ari 1 Pataki, Andras 1 Ptashnyk, Mariya 1 Radochová, Barbora 1 Rajc, Jasmina 1 Reuther, Sebastian 1 Rođak, Edi 1 Sandstede, Björn 1 Schlemmer, Heinz-Peter 1 Scita, Giorgio 1 Simon, Maximilian 1 Skobel, Marcin 1 Sturm, Volker J. F. 1 Sugihara, Kei 1 Svoboda, David 1 Takigawa-Imamura, Hisako 1 Tews, Björn 1 Voigt, Axel 1 Waugh, Riley 1 Weiss, Pierre 1 Weitz, David A. 1 Wenzel, Dennis 1 Yates, Christian A. 1 Zeller-Plumhoff, B. 1 Zhang, Dongxiao 1 Zhang, Wenxing 1 Zheng, Qiang 1 Ziener, Christian H. 1 Zygalakis, Konstantinos C. all top 5 Cited in 14 Serials 4 Bulletin of Mathematical Biology 4 Journal of Theoretical Biology 2 Journal of Mathematical Imaging and Vision 2 Image Analysis & Stereology 1 Computers & Mathematics with Applications 1 Journal of Fluid Mechanics 1 Statistical Papers 1 International Journal of Applied Mathematics and Computer Science 1 Computational Geosciences 1 Computational Methods in Applied Mathematics 1 SIAM Journal on Applied Dynamical Systems 1 The Annals of Applied Statistics 1 Arabian Journal for Science and Engineering 1 Proceedings of the Royal Society of London. A. Mathematical, Physical and Engineering Sciences all top 5 Cited in 13 Fields 12 Biology and other natural sciences (92-XX) 6 Statistics (62-XX) 5 Computer science (68-XX) 5 Fluid mechanics (76-XX) 5 Information and communication theory, circuits (94-XX) 4 Partial differential equations (35-XX) 3 Numerical analysis (65-XX) 2 Geophysics (86-XX) 1 History and biography (01-XX) 1 Harmonic analysis on Euclidean spaces (42-XX) 1 Calculus of variations and optimal control; optimization (49-XX) 1 Probability theory and stochastic processes (60-XX) 1 Mechanics of deformable solids (74-XX) Citations by Year