Bioconductor Software Authors: open development project Cited in: 211 Publications (2003–2022) Related Software: R; gcrma; edgeR; limma; KEGG; DEseq; … Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Numerical analysis (65-XX)
PASCAL VOC Software Authors: Everingham, M., Eslami, S. M. A., Van Gool, L., Williams, C. K. I., Winn, J., Zisserman, A Cited in: 83 Publications (2010–2022) Related Software: SIFT; ImageNet; MS-COCO; LabelMe; AlexNet; Caltech-256; … Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Computer science (68-XX)
UniProt Software Authors: The UniProt Consortium; Apweiler, R.; Bairoch, A.; Wu, C. H.; Barker, W. C.; Boeckmann, B.; Ferro, S.; Gasteiger, E.; Huang, H.; Lopez, R.; Magrane, M.; Martin, M. J.; Natale, D. A.; O’donovan, C.; Redaschi, N.; Yeh, L. S. Cited in: 73 Publications (2004–2022) Related Software: BLAST; PSI-BLAST; KEGG; Pfam; Cd-hit; LIBSVM; … Main Fields: Combinatorics (05-XX); Probability theory and stochastic processes (60-XX); Statistics (62-XX)
Penn Treebank Software Authors: University of Pennsylvania Cited in: 54 Publications (1996–2022) Related Software: WordNet; BERT; Adam; Python; BLEU; TreeTagger; … Main Fields: Mathematical logic and foundations (03-XX); Statistics (62-XX); Computer science (68-XX)
PLINK Software Authors: Purcell S, Neale B, Todd-Brown K, Thomas L, Ferreira MAR, Bender D et al Cited in: 58 Publications (1994–2022) Related Software: R; GCTA; Eigenstrat; STRUCTURE; Haploview; pi-MASS; … Main Fields: Mathematical logic and foundations (03-XX); Probability theory and stochastic processes (60-XX); Statistics (62-XX)
DAVID Software Authors: Huang DW, Sherman BT, Tan Q et al Cited in: 44 Publications (2007–2022) Related Software: KEGG; Bioconductor; R; Cytoscape; limma; STRING; … Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Numerical analysis (65-XX)
LabelMe Software Authors: Russell B.C., Torralba A., Murphy K.P., Freeman W.T. Cited in: 19 Publications (2008–2022) Related Software: PASCAL VOC; SIFT; ImageNet; GrabCut; MS-COCO; Caltech-256; … Main Fields: Statistics (62-XX); Computer science (68-XX); Information and communication theory, circuits (94-XX)
Gudhi Software Authors: INRIA; Clement Maria; Jean-Daniel Boissonnat; Marc Glisse; Mariette Yvinec Cited in: 40 Publications (2014–2022) Related Software: PHAT; Dionysus; javaPlex; Ripser; TDA; Perseus; … Main Fields: Algebraic topology (55-XX); Statistics (62-XX); Numerical analysis (65-XX)
NUS-WIDE Software Authors: T.-S. Chua, J. Tang, R. Hong, H. Li, Z. Luo, Y. Zheng Cited in: 21 Publications (2011–2021) Related Software: CIFAR; SIFT; ImageNet; TagProp; WSABIE; LIBSVM; … Main Fields: Linear and multilinear algebra; matrix theory (15-XX); Statistics (62-XX); Computer science (68-XX)
Hum-PLoc Software Authors: Chou KC, Shen HB Cited in: 22 Publications (2007–2019) Related Software: Cell-PLoc; Euk-mPLoc; Euk-PLoc; Hum-mPLoc; Memtype-2L; LIBSVM; … Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Computer science (68-XX)
miRBase Software Authors: Kozomara A, Griffiths-Jones S. Cited in: 14 Publications (2009–2018) Related Software: miRecords; KEGG; miTarget; starBase; MiPred; MiRFinder; … Main Fields: General and overarching topics; collections (00-XX); Statistics (62-XX); Computer science (68-XX)
Houdini Software Authors: Flanagan C, Leino KRM Cited in: 19 Publications (2001–2020) Related Software: ESC/Java; z3; JML; Eiffel; Boogie; Daikon; … Main Fields: Mathematical logic and foundations (03-XX); Computer science (68-XX)
Cityscapes Software Authors: Marius Cordts, Mohamed Omran, Sebastian Ramos, Timo Rehfeld, Markus Enzweiler, Rodrigo Benenson, Uwe Franke, Stefan Roth, Bernt Schiele Cited in: 15 Publications (2018–2022) Related Software: MS-COCO; KITTI; DeepLab; ImageNet; U-Net; SYNTHIA Dataset; … Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Computer science (68-XX)
VAC Software Authors: – Cited in: 21 Publications (1997–2022) Related Software: LASY; ZEUS; IRMHD; ALEGRA; HLLE; Aztec; … Main Fields: Partial differential equations (35-XX); Numerical analysis (65-XX); Computer science (68-XX)
ESLpred Software Authors: Bhasin, M.; Raghava, G. Cited in: 13 Publications (2005–2018) Related Software: Cell-PLoc; LOCSVMPSI; PseAAC; LIBSVM; Cd-hit; Psortb; … Main Fields: Harmonic analysis on Euclidean spaces (42-XX); Statistics (62-XX); Numerical analysis (65-XX)
TagProp Software Authors: Guillaumin, M., Mensink, T., Verbeek, J., & Schmid, C. Cited in: 13 Publications (2010–2018) Related Software: ImageNet; NUS-WIDE; SIFT; PASCAL VOC; Pegasos; C4.5; … Main Fields: Statistics (62-XX); Computer science (68-XX); Operations research, mathematical programming (90-XX)
iDNA-Prot Software Authors: Liu, B., Xu, J., Lan, X., Xu, R., Zhou, J., Wang, X., Chou, K.-C. Cited in: 16 Publications (2012–2019) Related Software: AFP-Pred; iPPI-Esml; iPro54-PseKNC; Pse-in-One; pSuc-Lys; 2L-piRNA; … Main Fields: Combinatorics (05-XX); Measure and integration (28-XX); Statistics (62-XX)
iSS-PseDNC Software Authors: Chen, W.; Feng, P. M.; Lin, H. Cited in: 16 Publications (2014–2019) Related Software: PseKNC; iRSpot-PseDNC; iCTX-Type; iRSpot-TNCPseAAC; iACP; pSuc-Lys; … Main Fields: Partial differential equations (35-XX); Statistics (62-XX); Computer science (68-XX)
OmpSs Software Authors: Bueno J, Planas J, Duran A, Badia RM, Martorell X, Ayguade E, et al. Cited in: 9 Publications (2015–2022) Related Software: StarPU; Superglue; DAGuE; CUDA; Intel TBB; QUARK; … Main Fields: Numerical analysis (65-XX); Computer science (68-XX); Mechanics of deformable solids (74-XX)
SMART Software Authors: Letunic, I., Copley, R.R., Schmidt, S., Ciccarelli, F.D., Doerks, T., Schultz, J., Ponting, C.P., Bork, P. Cited in: 7 Publications (2006–2019) Related Software: Pfam; UniProt; PROSITE; ClustalW; PSI-BLAST; ELM; … Main Fields: General and overarching topics; collections (00-XX); Statistics (62-XX); Computer science (68-XX)
OrthoMCL Software Authors: Li, L., Stoeckert, C.J., Roos, D. Cited in: 8 Publications (2006–2020) Related Software: MSOAR; BLAST; PSI-BLAST; eggNOG; Proteinortho; PHYLIP; … Main Fields: General and overarching topics; collections (00-XX); Combinatorics (05-XX); Statistics (62-XX)
Kalign Software Authors: T. Lassmann, O. Frings, E. Sonnhammer Cited in: 11 Publications (2011–2019) Related Software: MUSCLE; ClustalW; T-coffee; MAFFT; ProbCons; Balibase; … Main Fields: General and overarching topics; collections (00-XX); Probability theory and stochastic processes (60-XX); Statistics (62-XX)
BioPortal Software Authors: Noy NF, Shah NH, Whetzel PL et al Cited in: 8 Publications (2016–2020) Related Software: DBpedia; Chainsaw; Konclude; FaCT++; Pellet; Galaxy; … Main Fields: General and overarching topics; collections (00-XX); Mathematical logic and foundations (03-XX); Statistics (62-XX)
pGCL Software Authors: Cock, D. Cited in: 13 Publications (2005–2022) Related Software: Coq; Isabelle/HOL; Isabelle; HOL; Density Compiler; Lifting; … Main Fields: General and overarching topics; collections (00-XX); Mathematical logic and foundations (03-XX); Probability theory and stochastic processes (60-XX)
DyC Software Authors: Grant, B., Mock, M., Philipose, M., Chambers, C., Eggers, S.J. Cited in: 11 Publications (2000–2010) Related Software: VCODE; ASM; TALx86; LMS; Flask; BCEL; … Main Fields: Computer science (68-XX)
Galaxy Software Authors: Belinda Giardine, Cathy Riemer, Ross C. Hardison, Richard Burhans, Laura Elnitski, Prachi Shah, Yi Zhang, Daniel Blankenberg, Istvan Albert, James Taylor, Webb Miller, W. James Kent, Anton Nekrutenko Cited in: 7 Publications (2009–2018) Related Software: Bioconductor; R; TopHat; edgeR; STAR; BLAT; … Main Fields: Partial differential equations (35-XX); Statistics (62-XX); Computer science (68-XX)
GO-TermFinder Software Authors: Boyle, E. I., Weng, S., Gollub, J., Jin, H., Botstein, D., Cherry, J. M., Sherlock, G. Cited in: 5 Publications (2013–2020) Related Software: FatiGO; STRING; Cytoscape; KEGG; GOstat; iGA; … Main Fields: Combinatorics (05-XX); Statistics (62-XX); Computer science (68-XX)
S-CREAM Software Authors: Handschuh, Siegfried; Staab, Steffen; Ciravegna, Fabio Cited in: 8 Publications (2002–2008) Related Software: MnM; Protege; ROADRUNNER; SVMlight; TXL; GATE; … Main Fields: Computer science (68-XX); Information and communication theory, circuits (94-XX)
BEDTools Software Authors: Quinlan AR, Hall IM Cited in: 7 Publications (2012–2019) Related Software: R; Soap; IGV; FastQC; Samtools; edgeR; … Main Fields: General and overarching topics; collections (00-XX); Statistics (62-XX); Computer science (68-XX)
eggNOG Software Authors: Jaime Huerta-Cepas, Damian Szklarczyk, Kristoffer Forslund, Helen Cook, Davide Heller, Mathias C. Walter, Thomas Rattei, Daniel R. Mende, Shinichi Sunagawa, Michael Kuhn, Lars Juhl Jensen, Christian von Mering, Peer Bork Cited in: 6 Publications (2012–2021) Related Software: OrthoMCL; Prokka; HMMER; MAFFT; R; OrthoDB; … Main Fields: General and overarching topics; collections (00-XX); Combinatorics (05-XX); Statistics (62-XX)
Gpos-PLoc Software Authors: Shen, H.B.; Chou, K.C. Cited in: 11 Publications (2007–2017) Related Software: Virus-ploc; Hum-PLoc; Hum-mPLoc; Euk-PLoc; Euk-mPLoc; Gneg-mPLoc; … Main Fields: Statistics (62-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)
MultiLoc Software Authors: Annette Höglund, Pierre Dönnes, Torsten Blum, Hans-Werner Adolph, Oliver Kohlbacher Cited in: 7 Publications (2009–2018) Related Software: MultiLoc2; Cell-PLoc; iLoc-Euk; Euk-PLoc; Euk-mPLoc; Plant-mPLoc; … Main Fields: Probability theory and stochastic processes (60-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)
Praat Software Authors: Paul Boersma; David Weenink Cited in: 5 Publications (2003–2015) Related Software: VOICEBOX; Matlab; Python; SciPy; LibROSA; pysptk; … Main Fields: Partial differential equations (35-XX); Statistics (62-XX); Computer science (68-XX)
DynTex Software Authors: Renaud Péteria; Sándor Fazekasb; Mark J. Huiskesc Cited in: 5 Publications (2013–2022) Related Software: SIFT; LIBLINEAR; SURF; LIBSVM Main Fields: Numerical analysis (65-XX); Computer science (68-XX); Statistical mechanics, structure of matter (82-XX)
iTOL Software Authors: Ivica Letunic; Peer Bork Cited in: 5 Publications (2010–2022) Related Software: BLAST; PSI-BLAST; MUSCLE; Cd-hit; BWA; CLMB; … Main Fields: Combinatorics (05-XX); Statistics (62-XX); Computer science (68-XX)
PREvaIL Software Authors: Song, Jiangning; Li, Fuyi; Takemoto, Kazuhiro; Haffari, Gholamreza; Akutsu, Tatsuya; Chou, Kuo-Chen; Webb, Geoffrey I. Cited in: 10 Publications (2018–2019) Related Software: iDNA6mA-PseKNC; iRNA-PseColl; pLoc-mAnimal; 2L-piRNA; iPromoter-2L; iRSpot-EL; … Main Fields: Statistics (62-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)
recount Software Authors: Leonardo Collado-Torres, Abhinav Nellore, Andrew E. Jaffe, Margaret A. Taub, Kai Kammers, Shannon E. Ellis, Kasper Daniel Hansen, Ben Langmead, Jeffrey T. Leek Cited in: 9 Publications (2014–2019) Related Software: edgeR; Bioconductor; R; BaySeq; CAPUSHE; DESeq2; … Main Fields: Statistics (62-XX); Biology and other natural sciences (92-XX)
Wikipedia Miner Software Authors: David Milne; Ian H. Witten Cited in: 4 Publications (2012–2019) Related Software: DBpedia; MENTA; BabelNet; YAGO; Freebase; WordNet; … Main Fields: Numerical analysis (65-XX); Computer science (68-XX)
WSABIE Software Authors: Weston, J., Bengio, S., Usunier, N. Cited in: 8 Publications (2015–2022) Related Software: word2vec; NUS-WIDE; ImageNet; Im2Text; GloVe; GitHub; … Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Computer science (68-XX)
PathBLAST Software Authors: Kelley, B. P., Yuan, B., Lewitter, F., Sharan, R., Stockwell, B. R., Ideker T Cited in: 6 Publications (2011–2015) Related Software: KEGG; BLAST; PSI-BLAST; ClustalW; MAVisto; FANMOD; … Main Fields: General and overarching topics; collections (00-XX); Combinatorics (05-XX); Computer science (68-XX)
Segmentor3IsBack Software Authors: Alice Cleynen, Michel Koskas, Emilie Lebarbier, Guillem Rigaill, Stephane Robin Cited in: 5 Publications (2017–2021) Related Software: changepoint; wbs; R; FDRSeg; stepR; not; … Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX)
AmiGO Software Authors: Carbon, S., Ireland, A., Mungall, C. J., Shu, S., Marshall, B., Lewis, S. Cited in: 5 Publications (2010–2018) Related Software: KEGG; OBO-Edit; DEOD; PRMLT; SMOTE; MARCH-INSIDE; … Main Fields: Statistics (62-XX); Computer science (68-XX); Operations research, mathematical programming (90-XX)
RAST Software Authors: Meyer F, Paarmann D, D’Souza M et al Cited in: 4 Publications (2012–2019) Related Software: KEGG; MEGAN; Artemis; BLAST; PROSITE; PSI-BLAST; … Main Fields: General and overarching topics; collections (00-XX); Probability theory and stochastic processes (60-XX); Computer science (68-XX)
RepeatMasker Software Authors: Smit, A.F.A., Hubley, R., Green, P. Cited in: 8 Publications (2007–2020) Related Software: PipMaker; REPuter; ARACHNE; RePS; LAGAN; IDBA; … Main Fields: Combinatorics (05-XX); Probability theory and stochastic processes (60-XX); Computer science (68-XX)
ScanNet Software Authors: Angela Dai, Angel X. Chang, Manolis Savva, Maciej Halber, Thomas Funkhouser, Matthias Nießner Cited in: 4 Publications (2019–2022) Related Software: PointNet; ImageNet; SceneNN; DeepLab; Cityscapes; TensorFlow; … Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Computer science (68-XX)
SymChaff Software Authors: Sabharwal, Ashish Cited in: 8 Publications (2007–2022) Related Software: MiniSat; bliss; CDCLSym; Shatter; Chaff; Walksat; … Main Fields: Computer science (68-XX); Operations research, mathematical programming (90-XX)
ToppGene Suite Software Authors: Chen, J., E. E. Bardes, B. J. Aronow, A. G. Jegga Cited in: 6 Publications (2018–2021) Related Software: glasso; DEseq; SILGGM; TestBMN; huge; GlobalMIT; … Main Fields: Statistics (62-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)
VERL Software Authors: Francois A, Nevatia R, Hobbs J, Bolles R, Smith J Cited in: 3 Publications (2011–2022) Related Software: LIBSVM; MyStoryPlayer; OVID; Ratsnake; TopBraid; swrl; … Main Fields: Combinatorics (05-XX); Computer science (68-XX)
CAWICOMS Software Authors: Felfernig, Alexander; Friedrich, Gerhard; Jannach, Dietmar; Zanker, Markus Cited in: 6 Publications (2001–2004) Related Software: DAML+OIL; SiMoL; MINION; Simulink; Matlab; OOZE; … Main Fields: Mathematical logic and foundations (03-XX); General algebraic systems (08-XX); Computer science (68-XX)
JACK Software Authors: Gilles Barthe, Lilian Burdy, Julien Charles, Benjamin Grégoire, Marieke Huisman, Jean-Louis Lanet, Mariela Pavlova, Antoine Requet Cited in: 4 Publications (2004–2011) Related Software: KRAKATOA; JML; ESC/Java; Caduceus; Why3; Coq; … Main Fields: Computer science (68-XX)
simpA Software Authors: Ricci, Alessandro; Viroli, Mirko; Piancastelli, Giulio Cited in: 4 Publications (2002–2012) Related Software: CArtAgO; Featherweight Java; ReSpecT; Jadex; WADE; AmbientTalk; … Main Fields: Computer science (68-XX)
Babelomics Software Authors: Al-Shahrour, F., Minguez, P., Vaquerizas, J. M., Conde, L., Dopazo, J. Cited in: 3 Publications (2008–2010) Related Software: FatiGO; GOstat; Bioconductor; R; KEGG; BicAT; … Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Biology and other natural sciences (92-XX)
Blast2GO Software Authors: Conesa, A., Götz, S., García-Gómez, J.M., Terol, J., Talón, M., Robles, M. Cited in: 2 Publications (2019–2020) Related Software: DAVID; Pfam; KEGG; MODELLER; InterProScan; I-TASSER; … Main Fields: General and overarching topics; collections (00-XX); Operations research, mathematical programming (90-XX); Biology and other natural sciences (92-XX)
CAMERA Software Authors: Wu, D.; G. K. Smyth Cited in: 6 Publications (2015–2021) Related Software: R; ROAST; pyhrt; knockoff; cpi; GeneralisedCovarianceMeasure; … Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Numerical analysis (65-XX)
EnsemblePail Software Authors: Yan Xu, Xiaobo Wang, Jun Ding, Ling-Yun Wu, Naiyang Deng Cited in: 6 Publications (2010–2019) Related Software: Cell-PLoc; iHyd-PseAAC; iUbiq-Lys; iATC-mHyb; iRNA-PseColl; pLoc-mVirus; … Main Fields: Numerical analysis (65-XX); Computer science (68-XX); Operations research, mathematical programming (90-XX)
Flow Caml Software Authors: V. Simonet Cited in: 5 Publications (2009–2018) Related Software: Jif; HLIO; Haskell; JFlow; Creol; SeLINQ; … Main Fields: Computer science (68-XX)
GOASVM Software Authors: Wan, S., Mak, M.W., Kung, S.Y. Cited in: 6 Publications (2013–2018) Related Software: Cell-PLoc; iRSpot-PseDNC; iLoc-Gpos; Euk-mPLoc; Plant-mPLoc; iLoc-Hum; … Main Fields: Statistics (62-XX); Biology and other natural sciences (92-XX)
JiffyTune Software Authors: Conn AR, Coulman PK, Haring RA, Morrill GL, Visweswariah C, Wu CW Cited in: 5 Publications (1999–2014) Related Software: LANCELOT; TILOS; Ipopt; Mosek; GGPLAB; LOQO; … Main Fields: Numerical analysis (65-XX); Computer science (68-XX); Optics, electromagnetic theory (78-XX)
LASY Software Authors: Tóth, Gábor Cited in: 6 Publications (1997–2021) Related Software: VAC; Pluto; HLLE; NIRVANA; PARAMESH; SHASTA; … Main Fields: Partial differential equations (35-XX); Numerical analysis (65-XX); Computer science (68-XX)
PMut Software Authors: Ferrer-Costa C, Gelpí JL, Zamakola L, Parraga I, de la Cruz X, Orozco M Cited in: 2 Publications (2010–2012) Related Software: nsSNPAnalyzer; SNPs3D; UniProt; PANTHER; BLAST; PSI-BLAST; … Main Fields: Statistics (62-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)
SyncSpecCnn Software Authors: Li Yi, Hao Su, Xingwen Guo, Leonidas Guibas Cited in: 5 Publications (2018–2022) Related Software: PointNet; SpectralNet; GSPBOX; CIFAR; AR face; CMU PIE; … Main Fields: Numerical analysis (65-XX); Computer science (68-XX); Statistical mechanics, structure of matter (82-XX)
TiML Software Authors: Wang, P., Wang, D., Chlipala, A. Cited in: 6 Publications (2018–2021) Related Software: TcT; z3; Separation Logic; OptiMathSAT; Amortized Complexity; KITTeL; … Main Fields: Computer science (68-XX)
VARNA Software Authors: K. Darty, A. Denise. Y. Ponty Cited in: 4 Publications (2012–2022) Related Software: ViennaRNA; Rfam; R2R; jViz.Rna; PseudoViewer3; Infernal; … Main Fields: General and overarching topics; collections (00-XX); Combinatorics (05-XX); Calculus of variations and optimal control; optimization (49-XX)
Artemis Software Authors: Rutherford, K., Parkhill, J., Crook, J., Horsnell, T., Rice, P., Rajandream, M.A., Barrell, B. Cited in: 2 Publications (2014–2015) Related Software: EasyGene; RAST; ARACHNE; RePS; JBROWSE; ABySS; … Main Fields: Probability theory and stochastic processes (60-XX); Operations research, mathematical programming (90-XX); Biology and other natural sciences (92-XX)
Evigan Software Authors: Liu Q1, Mackey AJ, Roos DS, Pereira FC Cited in: 2 Publications (2011–2015) Related Software: SURF; Theano; LIBLINEAR; LIBSVM; Matlab; ARACHNE; … Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Computer science (68-XX)
FrameNet Software Authors: Baumgartner, Peter; Burchardt, Aljoscha Cited in: 5 Publications (2004–2010) Related Software: – Main Fields: Computer science (68-XX)
GENETAG Software Authors: Tanabe, L.; Xie, N.; Thom, L.H.; Matten, W.; Wilbur, W.J. Cited in: 1 Publication (2008) Related Software: GENIA corpus; bootstrap; OpenDMAP; MedPost; ABNER; iHOP; … Main Fields: Computer science (68-XX); Biology and other natural sciences (92-XX)
GeneWise Software Authors: Ewan Birney; Michele Clamp; Richard Durbin Cited in: 2 Publications (2005–2015) Related Software: BLAST; PSI-BLAST; DIALIGN; bioperl; ACME; ClustalW; … Main Fields: Combinatorics (05-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)
GOSim Software Authors: Holger Fröhlich Cited in: 4 Publications (2011–2017) Related Software: TRANSFAC; Tracer; MulRF; iGTP; TOPAL; ExaBayes; … Main Fields: General and overarching topics; collections (00-XX); Statistics (62-XX); Numerical analysis (65-XX)
GOtcha Software Authors: Martin, D.M., Berriman, M., Barton, G.J. Cited in: 3 Publications (2007–2008) Related Software: GOPET; BayGO; Gaggle; GOLEM; BiNGO; ProbCD; … Main Fields: Statistics (62-XX); Biology and other natural sciences (92-XX)
kdetrees Software Authors: Grady Weyenberg, Ruriko Yoshida Cited in: 5 Publications (2015–2019) Related Software: BEAST; Mesquite; PhyloNet; ASTRAL-II; Phylo-MCOA; CLIFF; … Main Fields: Combinatorics (05-XX); Convex and discrete geometry (52-XX); Statistics (62-XX)
methylKit Software Authors: Akalin, A., M. Kormaksson, S. Li, F. Garrett-Bakelman, M. Figueroa, A. Melnick, C. Mason Cited in: 5 Publications (2016–2021) Related Software: HMM-Fisher; HMM-DM; BSmooth; Bioconductor; MethylSig; MOABS; … Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Biology and other natural sciences (92-XX)
MnM Software Authors: Vargas-Vera, Maria; Motta, Enrico; Domingue, John; Lanzoni, Mattia; Stutt, Arthur; Ciravegna, Fabio Cited in: 2 Publications (2002–2006) Related Software: S-CREAM; DBpedia; Swoogle; AquaLog; swrl; SPARQL; … Main Fields: Computer science (68-XX); Information and communication theory, circuits (94-XX)
OrthoDB Software Authors: Kriventseva EV et al Cited in: 2 Publications (2013–2017) Related Software: OrthoMCL; eggNOG; GASTS; MSOAR; Mauve; Tracer; … Main Fields: General and overarching topics; collections (00-XX); Biology and other natural sciences (92-XX)
PRED-CLASS Software Authors: Pasquier C, Promponas VJ, Hamodrakas SJ Cited in: 3 Publications (2008–2012) Related Software: SVMlight; SLEX; BLAST; PSI-BLAST; SWIFT; AAindex; … Main Fields: Statistics (62-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)
ProbCD Software Authors: Ricardo Vêncio, Ilya Shmulevich Cited in: 0 Publications Related Software: GOPET; BayGO; Gaggle; GOLEM; GOtcha; BiNGO; … Main Fields: –
Prodigal Software Authors: Doug Hyatt, Gwo-Liang Chen, Philip F LoCascio, Miriam L Land, Frank W Larimer, Loren J Hauser Cited in: 3 Publications (2016–2022) Related Software: EasyGene; R; GeneMarkS; CRITICA; TICO; UniProt; … Main Fields: General and overarching topics; collections (00-XX); Statistics (62-XX); Biology and other natural sciences (92-XX)
ProGen Software Authors: Zhang, Xiao; Wang, Shan; Lian, Na Cited in: 5 Publications (2008–2009) Related Software: PSPLIB; Tabu search Main Fields: Integral equations (45-XX); Numerical analysis (65-XX); Computer science (68-XX)
ProMiner Software Authors: Fraunhofer SCAI; D. Hanisch, K. Fundel, H.-T. Mevissen, R. Zimmer, J. Fluck Cited in: 1 Publication (2017) Related Software: MutationFinder; ABNER; iHOP; GDAL; FastDTW; ms2; … Main Fields: General and overarching topics; collections (00-XX); Numerical analysis (65-XX)
QuickGO Software Authors: Binns, D.; Dimmer, E.; Huntley, R.; Barrell, D.; O'Donovan, C.; Apweiler, R. Cited in: 4 Publications (2012–2015) Related Software: Cell-PLoc; GOASVM; Euk-mPLoc; EpiLoc; YLoc; iNitro-Tyr; … Main Fields: Statistics (62-XX); Biology and other natural sciences (92-XX)
REDfly Software Authors: Halfon M, Gallo S, Bergman C Cited in: 2 Publications (2019–2020) Related Software: R; expansion-network; MaBoSS; GitHub; Python; Ginsim; … Main Fields: Biology and other natural sciences (92-XX)
SLAM Software Authors: Alexandersson, M., Cawley, S., Pachter, L. Cited in: 3 Publications (2005–2015) Related Software: BLAST; ECgene; PSI-BLAST; BLAT; ARACHNE; RePS; … Main Fields: Probability theory and stochastic processes (60-XX); Operations research, mathematical programming (90-XX); Biology and other natural sciences (92-XX)
SUPERFAMILY Software Authors: Derek Wilson, Ralph Pethica, Yiduo Zhou, Charles Talbot, Christine Vogel, Martin Madera, Cyrus Chothia, Julian Gough Cited in: 2 Publications (2010–2016) Related Software: PlantTFDB; eggNOG; ELM; dbCAN; antiSMASH; dissectHMMER; … Main Fields: Statistics (62-XX); Biology and other natural sciences (92-XX)
ANNOVAR Software Authors: Wang K, Li M, Hakonarson H Cited in: 3 Publications (2014–2020) Related Software: R; MEME; KEGG; WEKA; GenABEL; lme4; … Main Fields: General and overarching topics; collections (00-XX); Statistics (62-XX); Computer science (68-XX)
BioPhysConnectoR Software Authors: Hoffgaard, F.; Weil, P.; Hamacher, K. Cited in: 2 Publications (2010) Related Software: R; VMD; Pfam; Python; RHmm; BLAST; … Main Fields: Probability theory and stochastic processes (60-XX); Biology and other natural sciences (92-XX); Systems theory; control (93-XX)
CCGbank Software Authors: Hockenmaier, Julia; Steedman, Mark Cited in: 4 Publications (2007–2012) Related Software: Penn Treebank; Gringo; clasp; IDPDraw; iClingo; Clingo; … Main Fields: Computer science (68-XX); Game theory, economics, finance, and other social and behavioral sciences (91-XX)
ChromHMM Software Authors: Ernst, J., Kellis, M. Cited in: 4 Publications (2017–2021) Related Software: Bowtie 2; KEGG; edgeR; GitHub; STAR; intePareto; … Main Fields: Statistics (62-XX); Biology and other natural sciences (92-XX)
ComplexHeatmap Software Authors: Zuguang Gu Cited in: 2 Publications (2018–2020) Related Software: ggplot2; R; pheatmap; Superheat; heatmaply; dplyr; … Main Fields: Statistics (62-XX)
DensePose Software Authors: Rıza Alp Güler, Natalia Neverova, Iasonas Kokkinos Cited in: 2 Publications (2021–2022) Related Software: ImageNet; PyTorch; Vid2Player; LoFTR; PointNet; Pixel2Mesh; … Main Fields: Computer science (68-XX)
DISTIL Software Authors: Sudha Ram, Richard T. Snodgrass, Vijay Khatri and Yousub Hwang Cited in: 3 Publications (2001–2006) Related Software: OMT-G Main Fields: Computer science (68-XX)
ExonHunter Software Authors: Brejová, B.; Brown, D. G.; Li, M.; Vinař, T. Cited in: 3 Publications (2007–2008) Related Software: ESTScan; GlimmerHMM; TigrScan; EasyGene; SMART; Pfam; … Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Numerical analysis (65-XX)
GenomeGraphs Software Authors: Durinck S, Bullard J. Cited in: 1 Publication (2016) Related Software: Bioconductor; R; Rtracklayer; edgeR; Galaxy; ROAST; … Main Fields: Statistics (62-XX); Biology and other natural sciences (92-XX)
GOLEM Software Authors: R.S.G. Sealfon, M.A. Hibbs, C. Huttenhower, C.L. Myers, O.G. Troyanskaya Cited in: 1 Publication (2013) Related Software: BiNGO; GOPET; BayGO; Gaggle; GOtcha; ProbCD; … Main Fields: Biology and other natural sciences (92-XX)
H3D Software Authors: Patil A., Malla S., Gang H., Chen Y.-T. Cited in: 0 Publications Related Software: ApolloScape; KITTI; Mapillary Vistas; MS-COCO; ImageNet; nuScenes; … Main Fields: –
INMEX Software Authors: Xia, J., C.D. Fjell, et al. Cited in: 2 Publications (2018) Related Software: R; shiny; limma; edgeR; ExAtlas; ScanGEO; … Main Fields: Statistics (62-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)
MARCH-INSIDE Software Authors: González-Díaz H, Prado-Prado F, Ubeira FM Cited in: 4 Publications (2009–2014) Related Software: GPCR-CA; PRMLT; SMOTE; AmiGO; MIND-BEST; PISCES; … Main Fields: Combinatorics (05-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)
mGene Software Authors: Schweikert G, Zien A, Zeller G, Behr J, Dieterich C, Ong CS, Philips P, De Bona F, Hartmann L, Bohlen A Cited in: 3 Publications (2013–2017) Related Software: LIBSVM; Tracer; MulRF; iGTP; TOPAL; ExaBayes; … Main Fields: General and overarching topics; collections (00-XX); Statistics (62-XX); Computer science (68-XX)
MOTS Software Authors: Paul Voigtlaender, Michael Krause, Aljosa Osep, Jonathon Luiten, Berin Balachandar Gnana Sekar, Andreas Geiger, Bastian Leibe Cited in: 4 Publications (2021–2022) Related Software: ImageNet; KITTI; SSD; MOT16; EfficientNet; PyTorch; … Main Fields: Computer science (68-XX)
Transcriber Software Authors: Barras, Claude; Geoffrois, Edouard; Wu, Zhibiao; Liberman, Mark Cited in: 2 Publications (2001) Related Software: C4.5; TRUEVIZ; Jazz; XGobi; S-PLUS; R Main Fields: Computer science (68-XX)
AceView Software Authors: Thierry-Mieg D, Thierry-Mieg J Cited in: 1 Publication (2017) Related Software: BLAT; Tracer; MulRF; iGTP; TOPAL; ExaBayes; … Main Fields: General and overarching topics; collections (00-XX); Biology and other natural sciences (92-XX)