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Found 248 Software Packages (Results 1–100)

Stan

Software Authors:   Stan Development Team
Cited in: 259 Publications (2013–2023)
Related Software: R; JAGS; BayesDA; NUTS; RStan; WinBUGS; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Numerical analysis (65-XX)

mclust

Software Authors:   Chris Fraley; Adrian Raftery; Luca Scrucca
Cited in: 284 Publications (1999–2023)
Related Software: R; PGMM; flexmix; clusfind; UCI-ml; mixtools; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Computer science (68-XX)

LISP-STAT

Software Authors:   Luke Tierney
Cited in: 88 Publications (1977–2019)
Related Software: R; ViSta; XGobi; ARC; Mondrian; MacSpin; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Numerical analysis (65-XX)

RStan

Software Authors:   Jiqiang Guo; et. al.
Cited in: 93 Publications (2015–2023)
Related Software: R; rstan; Stan; BayesDA; JAGS; NUTS; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Numerical analysis (65-XX)

wbs

Software Authors:   Fryzlewicz, Piotr
Cited in: 98 Publications (2013–2023)
Related Software: R; changepoint; FDRSeg; CRAN; basta; ecp; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Computer science (68-XX)

BayesX

Software Authors:   Nikolaus Umlauf, Thomas Kneib, Nadja Klein, Felix Heinzl, Andreas Brezger, Daniel Sabanes Bove
Cited in: 81 Publications (2004–2022)
Related Software: R; SemiPar; GAMLSS; gamair; mgcv; WinBUGS; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Numerical analysis (65-XX)

bnlearn

Software Authors:   Marco Scutari
Cited in: 62 Publications (2009–2022)
Related Software: R; pcalg; TETRAD; gRain; deal; glasso; …
Main Fields: Combinatorics (05-XX); Statistics (62-XX); Numerical analysis (65-XX)

rstan

Software Authors:   Jiqiang Guo, Jonah Gabry, Ben Goodrich, Daniel Lee, Krzysztof Sakrejda, Oleg Sklyar, Jens Oehlschlaegel-Akiyoshi, Hadley Wickham, Joel de Guzman, John Fletcher, Thomas Heller, Eric Niebler
Cited in: 64 Publications (2017–2023)
Related Software: RStan; R; Stan; BayesDA; JAGS; NUTS; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Computer science (68-XX)

DPpackage

Software Authors:   Jara, A., Hanson, T. E., Quintana, F. A., Müller, P., Rosner, G. L.
Cited in: 65 Publications (2008–2022)
Related Software: R; BayesDA; CODA; boa; R2WinBUGS; BNPdensity; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Numerical analysis (65-XX)

geoR

Software Authors:   Paulo J. Ribeiro Jr; Peter J. Diggle
Cited in: 39 Publications (2003–2022)
Related Software: R; spBayes; RandomFields; fields; gstat; R-INLA; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Numerical analysis (65-XX)

abc

Software Authors:   Csillery Katalin; Lemaire Louisiane; Francois Olivier; Blum Michael
Cited in: 51 Publications (2011–2022)
Related Software: R; BayesDA; abctools; EasyABC; abcrf; DIYABC; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Numerical analysis (65-XX)

UQLab

Software Authors:   Lataniotis C, Marelli S, Sudret B
Cited in: 46 Publications (2016–2023)
Related Software: AK-MCS; DACE; Python; EGO; DAKOTA; Matlab; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Numerical analysis (65-XX)

ARACNE

Software Authors:   A. A. Margolin, I. Nemenman, K. Basso, C. Wiggins, G. Stolovitzky, R. D. Favera, A. Califano
Cited in: 34 Publications (2009–2022)
Related Software: minet; KEGG; glasso; SynTReN; GeneNetWeaver; R; …
Main Fields: Statistics (62-XX); Computer science (68-XX); Operations research, mathematical programming (90-XX)

ConfBands

Software Authors:   Krivobokova, Tatyana; Kneib, Thomas; Claeskens, Gerda
Cited in: 34 Publications (2009–2022)
Related Software: SemiPar; gamair; GAMLSS; R; fda (R); BayesX; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Numerical analysis (65-XX)

dlm

Software Authors:   Petris, Giovanni; Petrone, Sonia; Campagnoli, Patrizia
Cited in: 25 Publications (2009–2021)
Related Software: R; KFAS; dse; forecast; pomp; sspir; …
Main Fields: Dynamical systems and ergodic theory (37-XX); Statistics (62-XX); Numerical analysis (65-XX)

rstanarm

Software Authors:   Jonah Gabry, R Core Deveopment Team, Douglas Bates, Martin Maechler, Ben Bolker, Steve Walker, Brian Ripley, William Venables, Ben Goodrich
Cited in: 12 Publications (2017–2022)
Related Software: R; brms; Stan; RStan; lme4; JAGS; …
Main Fields: Linear and multilinear algebra; matrix theory (15-XX); Statistics (62-XX); Computer science (68-XX)

glmmAK

Software Authors:   Arnošt Komárek
Cited in: 28 Publications (2008–2022)
Related Software: R; lme4; S-PLUS; MEMSS; SemiPar; JAGS; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Numerical analysis (65-XX)

Label.switching

Software Authors:   Papastamoulis, P.
Cited in: 21 Publications (2016–2022)
Related Software: R; Stan; CODA; JAGS; lpSolve; Mcmcpack; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Computer science (68-XX)

pscl

Software Authors:   Simon Jackman, Alex Tahk, Achim Zeileis, Christina Maimone, Jim Fearon
Cited in: 18 Publications (2012–2021)
Related Software: R; VGAM; COUNT; lme4; geepack; survival; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Numerical analysis (65-XX)

IBAL

Software Authors:   Avi Pfeffer
Cited in: 27 Publications (2003–2019)
Related Software: Church; BLOG; PRISM; FACTORIE; PR-OWL; BUGS; …
Main Fields: Mathematical logic and foundations (03-XX); Probability theory and stochastic processes (60-XX); Statistics (62-XX)

stochvol

Software Authors:   Gregor Kastner
Cited in: 19 Publications (2014–2022)
Related Software: R; bvarsv; CODA; Rcpp; zoo; RcppArmadillo; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Numerical analysis (65-XX)

BioBayes

Software Authors:   Mark Girolami; Vladislav Vyshemirsky
Cited in: 20 Publications (2008–2022)
Related Software: PRMLT; deGradInfer; BayesDA; ABC-SysBio; R; PMTK; …
Main Fields: Ordinary differential equations (34-XX); Probability theory and stochastic processes (60-XX); Statistics (62-XX)

LS-SVMlab

Software Authors:   J.A.K. Suykens, T. Van Gestel, J. De Brabanter, B. De Moor, J. Vandewalle
Cited in: 25 Publications (2006–2020)
Related Software: Matlab; UCI-ml; LIBSVM; RSVM; SVM Toolbox; longmemo; …
Main Fields: Statistics (62-XX); Computer science (68-XX); Mechanics of deformable solids (74-XX)

HumanEva

Software Authors:   L. Sigal, A. O. Balan, M. J. Black
Cited in: 11 Publications (2012–2020)
Related Software: SIFT; Human3.6M; SCAPE; GrabCut; Camera Calibration; calib; …
Main Fields: Statistics (62-XX); Computer science (68-XX); Systems theory; control (93-XX)

DirectLiNGAM

Software Authors:   Shohei Shimizu; Takanori Inazumi; Yasuhiro Sogawa; Aapo Hyvärinen; Yoshinobu Kawahara; Takashi Washio; Patrik O. Hoyer; Kenneth Bollen
Cited in: 23 Publications (2011–2022)
Related Software: TETRAD; pcalg; R; glmnet; bnlearn; FastICA; …
Main Fields: Combinatorics (05-XX); Functional analysis (46-XX); Probability theory and stochastic processes (60-XX)

BayesSpec

Software Authors:   Rosen, O., Wood, S., Stoffer, D.
Cited in: 20 Publications (2012–2023)
Related Software: astsa; BayesDA; beyondWhittle; PRMLT; bsplinePsd; gss; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Computer science (68-XX)

GSM

Software Authors:   Sergio Venturini
Cited in: 18 Publications (2008–2022)
Related Software: R; CASdatasets; flexmix; mclust; mixsmsn; LOWESS; …
Main Fields: Ordinary differential equations (34-XX); Probability theory and stochastic processes (60-XX); Statistics (62-XX)

SamIam

Software Authors:   Adnan Darwiche; Keith Cascio
Cited in: 15 Publications (2002–2021)
Related Software: R; bnlearn; BayesNetBP; ggplot2; gRain; qgraph; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Computer science (68-XX)

EigenPrism

Software Authors:   Janson, Lucas; Barber, Rina Foygel; Candès, Emmanuel
Cited in: 17 Publications (2017–2022)
Related Software: covTest; CorrT; selectiveInference; hdi; GitHub; selective-inference; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Computer science (68-XX)

Monomvn

Software Authors:   Robert B. Gramacy
Cited in: 15 Publications (2010–2022)
Related Software: R; glmnet; glasso; ElemStatLearn; MASS (R); CRAN; …
Main Fields: Linear and multilinear algebra; matrix theory (15-XX); Statistics (62-XX); Numerical analysis (65-XX)

bcp

Software Authors:   Xiaofei Wang, Chandra Erdman, John W. Emerson
Cited in: 6 Publications (2014–2021)
Related Software: R; strucchange; changepoint; cpm; ecp; DNAcopy; …
Main Fields: Statistics (62-XX); Geophysics (86-XX); Biology and other natural sciences (92-XX)

bridgesampling

Software Authors:   Quentin F. Gronau, Henrik Singmann, Eric-Jan Wagenmakers
Cited in: 10 Publications (1996–2022)
Related Software: R; Stan; tsbridge; RStan; rstan; JAGS; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Computer science (68-XX)

LibBi

Software Authors:   Murray LM
Cited in: 9 Publications (2015–2021)
Related Software: R; vSMC; pomp; Biips; JAGS; WinBUGS; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Numerical analysis (65-XX)

phytools

Software Authors:   Liam J. Revell
Cited in: 11 Publications (2014–2022)
Related Software: R; ape; GEIGER; MrBayes; BEAUti; phangorn; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Computer science (68-XX)

ABC-SubSim

Software Authors:   Chiachio, Manuel; Beck, James L.; Chiachio, Juan; Rus, Guillermo
Cited in: 14 Publications (2014–2021)
Related Software: Pi4U; abcrf; AABC; epiABC; abc; CMA-ES; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Numerical analysis (65-XX)

Proc Traj

Software Authors:   BOBBY L. JONES; DANIEL S. NAGIN; KATHRYN ROEDER
Cited in: 14 Publications (2005–2022)
Related Software: SAS; Mplus; flexmix; R; lcmm; Latent GOLD; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX)

rethinking

Software Authors:   McElreath R
Cited in: 11 Publications (2019–2022)
Related Software: Stan; JAGS; R; RStan; brms; BayesDA; …
Main Fields: Statistics (62-XX); Quantum theory (81-XX); Statistical mechanics, structure of matter (82-XX)

acebayes

Software Authors:   Antony Overstall, David Woods, Maria Adamou
Cited in: 11 Publications (2018–2022)
Related Software: R; BayesDA; Rcpp; OptimalDesign; Julia; SSN; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Numerical analysis (65-XX)

Data2Dynamics

Software Authors:   Raue A, Steiert B, Schelker M, Kreutz C, Maiwald T, Hass H, et al
Cited in: 9 Publications (2018–2022)
Related Software: AMIGO; PESTO; PEtab; COPASI; SUNDIALS; R; …
Main Fields: Ordinary differential equations (34-XX); Partial differential equations (35-XX); Probability theory and stochastic processes (60-XX)

Medlda

Software Authors:   Zhu, Jun; Ahmed, Amr; Xing, Eric P.
Cited in: 13 Publications (2012–2021)
Related Software: PRMLT; LIBLINEAR; UCI-ml; GibbsLDA++; L-BFGS; horserule; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Computer science (68-XX)

DoseFinding

Software Authors:   Bjoern Bornkamp, Jose Pinheiro, Frank Bretz
Cited in: 10 Publications (2011–2021)
Related Software: R; SAS; mvtnorm; WinBUGS; nplr; drda; …
Main Fields: General and overarching topics; collections (00-XX); Statistics (62-XX); Numerical analysis (65-XX)

HDDM

Software Authors:   Thomas V. Wiecki, Imri Sofer, Michael J. Frank
Cited in: 10 Publications (2017–2022)
Related Software: Fast-dm; R; JAGS; DMAT; jags-wiener; Psychophysics Toolbox; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Game theory, economics, finance, and other social and behavioral sciences (91-XX)

spikeSlabGAM

Software Authors:   Fabian Scheipl
Cited in: 8 Publications (2012–2021)
Related Software: R; BayesX; mboost; mgcv; randomForest; mlbench; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX)

Bali-phy

Software Authors:   Suchard, M. A.; B. D. Redelings
Cited in: 10 Publications (2009–2020)
Related Software: MrBayes; Statalign; BEAST; MUSCLE; ClustalW; CLUSTAL; …
Main Fields: Combinatorics (05-XX); Probability theory and stochastic processes (60-XX); Statistics (62-XX)

BayesEstDiffusion.jl

Software Authors:   van der Meulen, Frank; Schauer, Moritz
Cited in: 11 Publications (2017–2022)
Related Software: Bridge.jl; Julia; ForwardDiff; CODA; EnKF; sde; …
Main Fields: Calculus of variations and optimal control; optimization (49-XX); Probability theory and stochastic processes (60-XX); Statistics (62-XX)

texmex

Software Authors:   Harry Southworth, Janet E. Heffernan
Cited in: 7 Publications (2013–2022)
Related Software: fExtremes; R; ismev; evir; SpatialExtremes; evdbayes; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Numerical analysis (65-XX)

dynesty

Software Authors:   Joshua S Speagle
Cited in: 1 Publication (2021)
Related Software: Python; MultiNest; emcee; SciPy; Astropy; polychord; …
Main Fields: Mechanics of particles and systems (70-XX); Quantum theory (81-XX); Relativity and gravitational theory (83-XX)

MTS

Software Authors:   R.S. Tsay
Cited in: 4 Publications (2016–2022)
Related Software: R; RcppArmadillo; Rcpp; tsDyn; BigVAR; vars; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Classical thermodynamics, heat transfer (80-XX)

ABC-SysBio

Software Authors:   Liepe, J., Barnes, C., Cule, E., Erguler, K., Kirk, P., Toni, T., Stumpf, M. P. H.
Cited in: 6 Publications (2012–2022)
Related Software: BioBayes; astroABC; EasyABC; SciPy; Python; BCM; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Numerical analysis (65-XX)

AdMit

Software Authors:   Herman K. van Dijk, Lennart F. Hoogerheide, David Ardia
Cited in: 5 Publications (2012–2019)
Related Software: R; CODA; DEoptim; tseries; MitISEM; zoo; …
Main Fields: Several complex variables and analytic spaces (32-XX); Probability theory and stochastic processes (60-XX); Statistics (62-XX)

Brq

Software Authors:   Rahim Alhamzawi
Cited in: 7 Publications (2015–2023)
Related Software: quantreg; R; bayesQR; Mcmcpack; CODA; LAPACK; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX)

EBSeq

Software Authors:   Leng N, Dawson JA, Thomson JA, Ruotti V, Rissman AI, Smits BM, Haag JD, Gould MN, Stewart RM, Kendziorski C
Cited in: 8 Publications (2015–2021)
Related Software: edgeR; Bioconductor; DEseq; TopHat; BaySeq; DESeq2; …
Main Fields: General and overarching topics; collections (00-XX); Probability theory and stochastic processes (60-XX); Statistics (62-XX)

JASP

Software Authors:   Jonathon Love; Ravi Selker; Maarten Marsman; Tahira Jamil; Damian Dropmann; Josine Verhagen; Alexander Ly; Quentin Gronau; Martin Šmíra; Sacha Epskamp; Dora Matzke; Anneliese Wild; Patrick Knight; Jeffrey Rouder; Richard Morey; Eric-Jan Wagenmakers
Cited in: 3 Publications (2019–2022)
Related Software: R; BayesFactor; SPSS; BAS; car; bridgesampling; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX)

MNP

Software Authors:   Imai, K.; Van Dyk, D. A.
Cited in: 5 Publications (2005–2017)
Related Software: R; bayesm; Mcmcpack; mnlogit; RSGHB; Mlogit; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Numerical analysis (65-XX)

Ake

Software Authors:   W. E. Wansouwé, S. M. Somé, C. C. Kokonendji
Cited in: 4 Publications (2020–2022)
Related Software: R; evmix; logKDE; Rcpp; kde1d; ks; …
Main Fields: Statistics (62-XX)

BAPS 2

Software Authors:   Jukka Corander, Patrik Waldmann, Pekka Marttinen, Mikko J. Sillanpää
Cited in: 6 Publications (2007–2015)
Related Software: STRUCTURE; iCDI-PseFpt; iEzy-drug; iNuc-PhysChem; iNitro-Tyr; iRSpot-PseDNC; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Computer science (68-XX)

BAT

Software Authors:   Caldwell, Allen; Kollar, Daniel; Kröninger, Kevin
Cited in: 6 Publications (2009–2018)
Related Software: HEPfit; Turing; Cuba; Optim; WinBUGS; R; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Quantum theory (81-XX)

LAMARC

Software Authors:   Kuhner, M. K.
Cited in: 6 Publications (2012–2020)
Related Software: BEAST; fastsimcoal; SIMCOAL; ForSim; simuPOP; Arlequin; …
Main Fields: Combinatorics (05-XX); Convex and discrete geometry (52-XX); Probability theory and stochastic processes (60-XX)

MIMIX

Software Authors:   Neal S. Grantham, Brian J. Reich, Elizabeth T. Borer, Kevin Gross
Cited in: 7 Publications (2019–2022)
Related Software: edgeR; Bioconductor; NBC; DESMAN; adaptiveGPCA; structSSI; …
Main Fields: Statistics (62-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)

pplacer

Software Authors:   Matsen, F.A., R.B. Kodner, et al.
Cited in: 7 Publications (2002–2022)
Related Software: MLTreeMap; SEPP; TIPP; FastTree; DEPP; PhyloGeoTool; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Computer science (68-XX)

PSICOV

Software Authors:   David T. Jones, Daniel W. A. Buchan, Domenico Cozzetto, Massimiliano Pontil
Cited in: 6 Publications (2014–2021)
Related Software: R; Pfam; BLAST; PSI-BLAST; NNcon; bnlearn; …
Main Fields: Statistics (62-XX); Statistical mechanics, structure of matter (82-XX); Operations research, mathematical programming (90-XX)

bclust

Software Authors:   Vahid Partovi Nia, Anthony C. Davison
Cited in: 5 Publications (2014–2019)
Related Software: R; mclust; clustvarsel; sparcl; HDclassif; Rmixmod; …
Main Fields: Statistics (62-XX); Game theory, economics, finance, and other social and behavioral sciences (91-XX)

BEAGLE

Software Authors:   Ayres, D.L., Darling, A., Zwickl, D.J., Beerli, P., Holder, M.T., Lewis, P.O., Huelsenbeck, J.P., Ronquist, F., Swofford, D.L., Cummings, M.P., Rambaut, A., Suchard, M.A.
Cited in: 4 Publications (2014–2022)
Related Software: R; BEAST; MrBayes; BEAUti; ape; Rcpp; …
Main Fields: General and overarching topics; collections (00-XX); Statistics (62-XX); Numerical analysis (65-XX)

BNPmix

Software Authors:   Riccardo Corradin
Cited in: 5 Publications (1995–2022)
Related Software: CODA; BNPdensity; DPpackage; R; mixdir; msBP; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX)

BUQO

Software Authors:   Repetti, Audrey; Pereyra, Marcelo; Wiaux, Yves
Cited in: 6 Publications (2019–2022)
Related Software: DnCNN; BSDS; UNLocBoX; Noise2Noise; FFDNet; BayesDA; …
Main Fields: Calculus of variations and optimal control; optimization (49-XX); Statistics (62-XX); Numerical analysis (65-XX)

BVSNLP

Software Authors:   Amir Nikooienejad
Cited in: 5 Publications (2019–2021)
Related Software: R; EMVS; glmnet; survAUC; CRAN; BayesVarSel; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX)

MultiwayRegression

Software Authors:   Eric F. Lock
Cited in: 6 Publications (2018–2022)
Related Software: SupCP; msda; penalizedLDA; glasso; fda (R); CORALS; …
Main Fields: Statistics (62-XX)

pcaMethods

Software Authors:   Wolfram Stacklies, Henning Redestig, Kevin Wright
Cited in: 4 Publications (2017–2019)
Related Software: R; MICE; Bioconductor; mi; SPSS; VIM; …
Main Fields: Statistics (62-XX); Computer science (68-XX); Game theory, economics, finance, and other social and behavioral sciences (91-XX)

phylodyn

Software Authors:   Michael D. Karcher, Julia A. Palacios, Shiwei Lan, Vladimir N. Minin
Cited in: 5 Publications (2017–2022)
Related Software: ape; adapref; Nextstrain; BEAST; coalescentMCMC; BoundedCoalescent; …
Main Fields: Statistics (62-XX); Biology and other natural sciences (92-XX)

spatcounts

Software Authors:   Czado, Claudia; Schabenberger, Holger; Erhardt, Vinzenz
Cited in: 4 Publications (2012–2017)
Related Software: R; spam; BUGS; maptools; spTimer; nlme; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Game theory, economics, finance, and other social and behavioral sciences (91-XX)

Arlequin

Software Authors:   Excoffier, L.; Laval, G.; Schneider, S.
Cited in: 5 Publications (2002–2016)
Related Software: PHYLIP; LAMARC; fastsimcoal; SIMCOAL; ForSim; BEAST; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Mechanics of deformable solids (74-XX)

BARS

Software Authors:   Garrick Wallstrom, Jeffrey Liebner, Robert E. Kass
Cited in: 3 Publications (2009–2018)
Related Software: R; LAPACK; TISEAN; Fahrmeir; lme4; STAR; …
Main Fields: Statistics (62-XX); Operations research, mathematical programming (90-XX); Biology and other natural sciences (92-XX)

casper

Software Authors:   Rossell, David; Attolini, Camille Stephan-Otto; Kroiss, Manuel; St"ocker, Almond
Cited in: 5 Publications (2014–2018)
Related Software: RSEM; TopHat; EBSeq; edgeR; Bioconductor; DRIMSeq; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Biology and other natural sciences (92-XX)

Mata

Software Authors:   StataCorp
Cited in: 3 Publications (2012–2020)
Related Software: Stata; bacon; mixlogit; asmprobit; hadimvo; dfactor; …
Main Fields: Statistics (62-XX); Game theory, economics, finance, and other social and behavioral sciences (91-XX)

MATEDA

Software Authors:   Santana R, Bielza C, Larrañaga P, Lozano JA, Echegoyen C, Mendiburu A, Armañanzas R, Shakya S
Cited in: 3 Publications (2012–2018)
Related Software: Matlab; LiO; MOEA/D; BNT; UCI-ml; truncnorm; …
Main Fields: Statistics (62-XX); Computer science (68-XX); Operations research, mathematical programming (90-XX)

RSGHB

Software Authors:   Jeff Dumont, Jeff Keller, Chase Carpenter
Cited in: 1 Publication (2019)
Related Software: Mlogit; R; Rchoice; bayesm; gmnl; Stata; …
Main Fields: Statistics (62-XX)

sbgcop

Software Authors:   Peter Hoff
Cited in: 3 Publications (2007–2019)
Related Software: R; fgac; mvtnorm; gcimputeR; Scikit; CoImp; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Computer science (68-XX)

Statalign

Software Authors:   Novák, Á., Miklós, I., Lyngsoe, R., Hein, J.
Cited in: 4 Publications (2012–2018)
Related Software: Bali-phy; SATe; ProbCons; BEAST; PAUP*; iGTP; …
Main Fields: Combinatorics (05-XX); Linear and multilinear algebra; matrix theory (15-XX); Statistics (62-XX)

astroABC

Software Authors:   Jennings, E.; Madigan, M.
Cited in: 3 Publications (2018–2022)
Related Software: cosmoabc; SciPy; NumPy; PyTorch; EasyABC; ABC-SysBio; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Numerical analysis (65-XX)

BGGM

Software Authors:   Donald Williams; Joris Mulder
Cited in: 2 Publications (2022)
Related Software: BDgraph; R; qgraph; BayesianGLasso; BigQuic; glassoFast; …
Main Fields: General and overarching topics; collections (00-XX); Statistics (62-XX)

DAFI

Software Authors:   Zhang, Xin-Lei; Michelén-Ströfer, Carlos; Xiao, Heng
Cited in: 4 Publications (2020–2021)
Related Software: EnKF; GitHub; OpenFOAM; OpenDA; DATeS; Spalart-Allmaras; …
Main Fields: Partial differential equations (35-XX); Probability theory and stochastic processes (60-XX); Numerical analysis (65-XX)

dirichletprocess

Software Authors:   Gordon J. Ross, Dean Markwick, Kees Mulder
Cited in: 3 Publications (2019–2020)
Related Software: mixdir; CODA; msBP; BNPMIXcluster; BNPdensity; PReMiuM; …
Main Fields: Statistics (62-XX)

ebdbNet

Software Authors:   Andrea Rau
Cited in: 4 Publications (2010–2018)
Related Software: R; bnstruct; bnlearn; glmnet; glasso; TETRAD; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Biology and other natural sciences (92-XX)

hbsae

Software Authors:   Harm Jan Boonstra
Cited in: 2 Publications (2020–2022)
Related Software: R; PovMap; rsae; BayesSAE; emdi; JoSAE; …
Main Fields: Statistics (62-XX)

IsingFit

Software Authors:   Claudia van Borkulo, Sacha Epskamp, Alexander Robitzsch
Cited in: 3 Publications (2022)
Related Software: qgraph; R; IsingSampler; stringr; gtools; XMRF; …
Main Fields: Statistics (62-XX)

msBP

Software Authors:   Antonio Canale
Cited in: 2 Publications (2016–2021)
Related Software: R; BNPdensity; CODA; DPpackage; akdensity; asciker; …
Main Fields: Statistics (62-XX)

nestcheck

Software Authors:   Edward Higson, Will Handley, Mike Hobson, Anthony Lasenby
Cited in: 1 Publication (2019)
Related Software: MultiNest; perfectns; dyPolyChord; polychord; dynesty; Python; …
Main Fields: Statistics (62-XX)

pacbpred

Software Authors:   Benjamin Guedj
Cited in: 4 Publications (2013–2018)
Related Software: BayesDA; hgam; ElemStatLearn; SSS; R; Treerank
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Computer science (68-XX)

prediction-prostate-surveillance

Software Authors:   Coley, Rebecca Yates; Fisher, Aaron J.; Mamawala, Mufaddal; Carter, Herbert Ballentine; Pienta, Kenneth J.; Zeger, Scott L.
Cited in: 4 Publications (2016–2023)
Related Software: R; Stan; Rcpp; rjags; KernSmooth; PRMLT; …
Main Fields: Statistics (62-XX); Computer science (68-XX); Operations research, mathematical programming (90-XX)

ProtTest 3

Software Authors:   Darriba D, Taboada GL, Doallo R, Posada D.
Cited in: 2 Publications (2013–2017)
Related Software: iGTP; MrBayes; OXBench; SABmark; Mugsy; Kalign; …
Main Fields: General and overarching topics; collections (00-XX); Biology and other natural sciences (92-XX)

runmlwin

Software Authors:   Leckie G, Charlton C
Cited in: 1 Publication (2015)
Related Software: MLwiN; WinBUGS; Stata; GLLAMM; R; Mplus; …
Main Fields: Statistics (62-XX)

shazam

Software Authors:   Mohamed Uduman, Gur Yaari, Namita Gupta, Jason Vander Heiden, Ang Cui, Susanna Marquez, Julian Zhou, Steven Kleinstein [aut, cph]
Cited in: 4 Publications (1993–2020)
Related Software: DeepTCR; repgenHMM; OLGA; Alakazam; Change-O; Ace; …
Main Fields: Statistics (62-XX); Game theory, economics, finance, and other social and behavioral sciences (91-XX); Biology and other natural sciences (92-XX)

shrinkTVP

Software Authors:   Peter Knaus, Angela Bitto-Nemling , Annalisa Cadonna, Sylvia Frühwirth-Schnatter, Daniel Winkler, Kemal Dingic
Cited in: 1 Publication (2021)
Related Software: R; zoo; CODA; RcppArmadillo; Rcpp; stochvol; …
Main Fields: Game theory, economics, finance, and other social and behavioral sciences (91-XX)

StanHeaders

Software Authors:   Ben Goodrich, et.al.
Cited in: 1 Publication (2022)
Related Software: rstan; R; Stan; lme4; brms; JAGS; …
Main Fields: Statistics (62-XX); Computer science (68-XX)

Wrapped

Software Authors:   Saralees Nadarajah, Yuanyuan Zhang
Cited in: 3 Publications (2018–2021)
Related Software: CircStats; circular; Directional; CircOutlier; CircNNTSR; isocir; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX)

ABrox

Software Authors:   Mertens, U. K., Voss, A. and Radev, S.
Cited in: 2 Publications (2018–2020)
Related Software: abctools; ABCtoolbox; DIYABC; Python; Pegasus; Docker; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Computer science (68-XX)

Apollo

Software Authors:   Stephane Hess, David Palma
Cited in: 2 Publications (2021)
Related Software: logitr; mixl; fastDummies; nloptr; Stata; gmnl; …
Main Fields: Statistics (62-XX); Game theory, economics, finance, and other social and behavioral sciences (91-XX)

BayesBinMix

Software Authors:   Panagiotis Papastamoulis, Magnus Rattray
Cited in: 2 Publications (2018–2020)
Related Software: Label.switching; CODA; doParallel; foreach; PGMM; UCI-ml; …
Main Fields: Statistics (62-XX)

Bayesian Regression

Software Authors:   Karabatsos, G.
Cited in: 3 Publications (2016–2019)
Related Software: ElemStatLearn; glmnet; BayesDA; DPpackage; Scikit
Main Fields: Statistics (62-XX)

BayesPostEst

Software Authors:   Johannes Karreth, Shana Scogin, Rob Williams, Andreas Beger, Myunghee Lee, Neil Williams
Cited in: 0 Publications
Related Software: RStan; JAGS; Mcmcpack; R; bayestestR; Stan; …
Main Fields: