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Found 327 Software Packages (Results 1–100)

WinBUGS

Software Authors:   David Spiegelhalter; Andrew Thomas; Nicky Best; Dave Lunn
Cited in: 707 Publications (1999–2023)
Related Software: R; BayesDA; BUGS; JAGS; SemiPar; CODA; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Numerical analysis (65-XX)

PRISM

Software Authors:   Kwiatkowska, Marta; Norman, Gethin; Parker, David
Cited in: 438 Publications (2001–2022)
Related Software: MRMC; Uppaal; SPIN; Storm; Bio-PEPA; PEPA; …
Main Fields: Mathematical logic and foundations (03-XX); Probability theory and stochastic processes (60-XX); Computer science (68-XX)

PEPA

Software Authors:   Jane Hillston; http://www.dcs.ed.ac.uk/pepa/people/
Cited in: 107 Publications (1995–2022)
Related Software: Bio-PEPA; PRISM; BIOCHAM; SPADES; SMART_; HyTech; …
Main Fields: Probability theory and stochastic processes (60-XX); Numerical analysis (65-XX); Computer science (68-XX)

R-INLA

Software Authors:   Martins, Thiago G.; Rue, Håvard
Cited in: 75 Publications (2010–2023)
Related Software: R; INLA; spBayes; GMRFLib; JAGS; FRK; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Numerical analysis (65-XX)

OpenBUGS

Software Authors:   Andrew Thomas
Cited in: 74 Publications (2007–2022)
Related Software: R; WinBUGS; JAGS; BUGS; CODA; R2WinBUGS; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Numerical analysis (65-XX)

MRMC

Software Authors:   Joost-Pieter Katoen; RWTH Aachen
Cited in: 67 Publications (2006–2022)
Related Software: PRISM; Ymer; Uppaal; CADP; Storm; CEGAR; …
Main Fields: Probability theory and stochastic processes (60-XX); Computer science (68-XX); Operations research, mathematical programming (90-XX)

SsfPack

Software Authors:   Koopman, Siem Jan; Shephard, Neil; Doornik, Jurgen A.
Cited in: 61 Publications (1999–2022)
Related Software: Ox; STAMP; R; astsa; Stata; SAS; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Game theory, economics, finance, and other social and behavioral sciences (91-XX)

MrBayes

Software Authors:   Ronquist, F.; Huelsenbeck, J. P.; van der Mark, P.
Cited in: 52 Publications (2004–2021)
Related Software: BEAST; RAxML; PHYLIP; fastDNAml; PAUP*; R; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Numerical analysis (65-XX)

DEoptim

Software Authors:   Mullen, Katharine M.; Ardia, David; Gil, David L.; Windover, Donald ;Cline, James
Cited in: 42 Publications (2011–2022)
Related Software: R; GA; Rsolnp; rgenoud; alabama; Rcpp; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Computer science (68-XX)

MultiNest

Software Authors:   Feroz, F., Hobson, M.P., Bridges, M
Cited in: 44 Publications (2006–2022)
Related Software: polychord; Python; dynesty; nestcheck; CosmoMC; dyPolyChord; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Quantum theory (81-XX)

SHARPE

Software Authors:   Sahner, Robin; Trivedi, Kishor S.; Puliafito, Antonio
Cited in: 36 Publications (1992–2021)
Related Software: Möbius; SMART_; SPNP; AToM3; TimeNET; PRISM; …
Main Fields: Probability theory and stochastic processes (60-XX); Numerical analysis (65-XX); Computer science (68-XX)

PRISM

Software Authors:   Sato, T., Kameya, Y.
Cited in: 41 Publications (2006–2022)
Related Software: ProbLog; CP-logic; PITA; BLOG; Church; IBAL; …
Main Fields: History and biography (01-XX); Mathematical logic and foundations (03-XX); Probability theory and stochastic processes (60-XX)

SSS

Software Authors:   Hans, Chris; Dobra, Adrian; West, Mike
Cited in: 39 Publications (2007–2022)
Related Software: EMVS; glmnet; BayesDA; EBayesThresh; glasso; R; …
Main Fields: General and overarching topics; collections (00-XX); Statistics (62-XX); Numerical analysis (65-XX)

QUIC

Software Authors:   Hsieh, Cho-Jui; Sustik, M'aty'as A.; Dhillon, Inderjit S.; Ravikumar, Pradeep
Cited in: 35 Publications (2014–2022)
Related Software: glasso; huge; R; Saga; FASTCLIME; GMRFLib; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Computer science (68-XX)

dlm

Software Authors:   Petris, Giovanni; Petrone, Sonia; Campagnoli, Patrizia
Cited in: 25 Publications (2009–2021)
Related Software: R; KFAS; dse; forecast; pomp; sspir; …
Main Fields: Dynamical systems and ergodic theory (37-XX); Statistics (62-XX); Numerical analysis (65-XX)

Rfam

Software Authors:   Burge SW, Daub J, Eberhardt R, Tate J, Barquist L, Nawrocki EP, Eddy SR, Gardner PP, Bateman A
Cited in: 24 Publications (2006–2019)
Related Software: Infernal; R; Rnamotif; ViennaRNA; BLAT; KEGG; …
Main Fields: General and overarching topics; collections (00-XX); Statistics (62-XX); Computer science (68-XX)

SMART_

Software Authors:   Ciardo, G.; Jones, R.L.; Miner, A.S.; Siminiceanu, R.
Cited in: 23 Publications (2000–2018)
Related Software: SPIN; PRISM; NuSMV; Möbius; PEPA; MRMC; …
Main Fields: Mathematical logic and foundations (03-XX); Numerical analysis (65-XX); Computer science (68-XX)

R-MAX

Software Authors:   Brafman, Ronen I.; Tennenholtz, Moshe
Cited in: 32 Publications (2002–2016)
Related Software: AWESOME; AdaBoost.MH; PRMLT; ElemStatLearn; POMDPS; GAMUT
Main Fields: Statistics (62-XX); Computer science (68-XX); Operations research, mathematical programming (90-XX)

Storm

Software Authors:   Christian Dehnert, Sebastian Junges, Joost-Pieter Katoen, Matthias Volk
Cited in: 31 Publications (2017–2022)
Related Software: PRISM; PROPhESY; MRMC; Jani; iscasMc; POMDP; …
Main Fields: Mathematical logic and foundations (03-XX); Probability theory and stochastic processes (60-XX); Computer science (68-XX)

APMC

Software Authors:   Hérault, Thomas; Lassaigne, Richard; Magniette, Frédéric; Peyronnet, Sylvain
Cited in: 28 Publications (2004–2021)
Related Software: PRISM; Uppaal; INFAMY; PLASMA-lab; PLASMA; Ymer; …
Main Fields: Statistics (62-XX); Computer science (68-XX); Operations research, mathematical programming (90-XX)

BioProspector

Software Authors:   Liu, X., Brutlag, D., Liu, J.
Cited in: 21 Publications (2002–2013)
Related Software: TRANSFAC; JASPAR; WebLogo; CisModule; PhyME; TEIRESIAS; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Numerical analysis (65-XX)

PITA

Software Authors:   Riguzzi, Fabrizio; Swift, Terrance
Cited in: 24 Publications (2010–2022)
Related Software: ProbLog; CP-logic; PRISM; MCINTYRE; XSB; Church; …
Main Fields: Mathematical logic and foundations (03-XX); Statistics (62-XX); Computer science (68-XX)

BDgraph

Software Authors:   Mohammadi, A.; Wit, E.C.
Cited in: 19 Publications (2015–2023)
Related Software: R; glasso; huge; HdBCS; igraph; BGGM; …
Main Fields: General and overarching topics; collections (00-XX); Statistics (62-XX); Numerical analysis (65-XX)

latentnet

Software Authors:   Pavel N. Krivitsky, Mark S. Handcock
Cited in: 16 Publications (2010–2022)
Related Software: R; statnet; ergm; igraph; network; SAS; …
Main Fields: Combinatorics (05-XX); Statistics (62-XX); Numerical analysis (65-XX)

VAMPnets

Software Authors:   Andreas Mardt, Luca Pasquali, Hao Wu, Frank Noé
Cited in: 22 Publications (2019–2022)
Related Software: PDE-Net; torchdiffeq; TensorFlow; SINDy; GAIO; PRMLT; …
Main Fields: Dynamical systems and ergodic theory (37-XX); Operator theory (47-XX); Numerical analysis (65-XX)

HMMER

Software Authors:   Robert D. Finn, Jody Clements, Sean R. Eddy
Cited in: 12 Publications (2006–2019)
Related Software: ClustalW; UniProt; MUSCLE; Prodigal; MAFFT; R; …
Main Fields: General and overarching topics; collections (00-XX); Harmonic analysis on Euclidean spaces (42-XX); Statistics (62-XX)

CARBayes

Software Authors:   Duncan Lee
Cited in: 11 Publications (2018–2023)
Related Software: R; spBayes; R-INLA; spTimer; INLA; CODA; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Astronomy and astrophysics (85-XX)

Statistics Toolbox

Software Authors:   MathWorks
Cited in: 15 Publications (1999–2017)
Related Software: Matlab; MBoxtest; Tcodes; sg_min; LDR; envlp; …
Main Fields: General and overarching topics; collections (00-XX); Probability theory and stochastic processes (60-XX); Statistics (62-XX)

LiQuor

Software Authors:   –
Cited in: 18 Publications (2007–2018)
Related Software: PRISM; MRMC; Rapture; Ymer; PASS; Rabinizer; …
Main Fields: Mathematical logic and foundations (03-XX); Probability theory and stochastic processes (60-XX); Computer science (68-XX)

PVeStA

Software Authors:   AlTurki, M., Meseguer, J
Cited in: 13 Publications (2011–2021)
Related Software: Maude; PMaude; VESTA; PRISM; Uppaal; PSMaude; …
Main Fields: Mathematical logic and foundations (03-XX); Computer science (68-XX); Operations research, mathematical programming (90-XX)

moveHMM

Software Authors:   Theo Michelot, Roland Langrock, Toby Patterson, Eric Rexstad
Cited in: 14 Publications (2016–2022)
Related Software: R; momentuHMM; circular; CircStats; ctmm; crawl; …
Main Fields: General and overarching topics; collections (00-XX); Probability theory and stochastic processes (60-XX); Statistics (62-XX)

PennCNV

Software Authors:   Wang, K., Li, M., Hadley, D., et al.
Cited in: 13 Publications (2009–2018)
Related Software: BioHMM; VanillaICE; BRLMM; CARAT; R; CNVassoc; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Numerical analysis (65-XX)

BGX

Software Authors:   Ernest Turro; Natalia Bochkina; Anne-Mette K Hein; Sylvia Richardson
Cited in: 14 Publications (2005–2021)
Related Software: Bioconductor; gcrma; ramcmc; Affycomp III; WinBUGS; BayesDA; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Numerical analysis (65-XX)

FAUST2

Software Authors:   S. Esmaeil Zadeh Soudjani, C. Gevaerts, A. Abate
Cited in: 16 Publications (2017–2022)
Related Software: StocHy; PRISM; SReachTools; AMYTISS; Sostools; SCOTS; …
Main Fields: Probability theory and stochastic processes (60-XX); Computer science (68-XX); Operations research, mathematical programming (90-XX)

lgcp

Software Authors:   Benjamin M. Taylor, Tilman M. Davies, Barry S. Rowlingson, Peter J. Diggle
Cited in: 7 Publications (2013–2022)
Related Software: R; spatstat; RandomFields; INLA; raster; R-INLA; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Numerical analysis (65-XX)

bcp

Software Authors:   Xiaofei Wang, Chandra Erdman, John W. Emerson
Cited in: 6 Publications (2014–2021)
Related Software: R; strucchange; changepoint; cpm; ecp; DNAcopy; …
Main Fields: Statistics (62-XX); Geophysics (86-XX); Biology and other natural sciences (92-XX)

HTK

Software Authors:   Young, S. J; Cambridge University Engineering Department (CUED)
Cited in: 8 Publications (1997–2007)
Related Software: Praat; Pfinder; rastamat; Sphinx-II; AdaBoost.MH
Main Fields: Statistics (62-XX); Computer science (68-XX); Operations research, mathematical programming (90-XX)

LibBi

Software Authors:   Murray LM
Cited in: 9 Publications (2015–2021)
Related Software: R; vSMC; pomp; Biips; JAGS; WinBUGS; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Numerical analysis (65-XX)

PROPhESY

Software Authors:   Dehnert, C., Junges, S., Jansen, N., Corzilius, F., Volk, M., Bruintjes, H., Katoen, J.-P., Ábrahám, E.
Cited in: 15 Publications (2015–2022)
Related Software: PRISM; Storm; PARAM; MRMC; PASS; Sylvan; …
Main Fields: General and overarching topics; collections (00-XX); Mathematical logic and foundations (03-XX); Probability theory and stochastic processes (60-XX)

blasso

Software Authors:   Hans, Chris
Cited in: 14 Publications (2011–2022)
Related Software: OSCAR; glmnet; ElemStatLearn; glasso; EBayesThresh; mcmcse; …
Main Fields: Partial differential equations (35-XX); Probability theory and stochastic processes (60-XX); Statistics (62-XX)

hmm

Software Authors:   K Murphy
Cited in: 12 Publications (2004–2020)
Related Software: Matlab; R; Brain Connectivity Toolbox; seqHMM; depmixS4; hmm.discnp; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Computer science (68-XX)

PARAM

Software Authors:   Ernst Moritz Hahn, Holger Hermanns, Björn Wachter, Lijun Zhang
Cited in: 13 Publications (2011–2020)
Related Software: PRISM; PROPhESY; Storm; Rapture; MRMC; Bio-PEPA; …
Main Fields: Mathematical logic and foundations (03-XX); Probability theory and stochastic processes (60-XX); Computer science (68-XX)

R/qtl

Software Authors:   Karl W Broman, Hao Wu, Gary Churchill, Śaunak Sen
Cited in: 11 Publications (2006–2022)
Related Software: R; igraph; PLINK; pergola; netgwas; Matrix; …
Main Fields: General and overarching topics; collections (00-XX); Statistics (62-XX); Numerical analysis (65-XX)

TileMap

Software Authors:   Ji, H. and Wong, W. A.
Cited in: 10 Publications (2006–2012)
Related Software: R; sma; vsn; FindPeaks; ChIPOTle; GENEVESTIGATOR; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Numerical analysis (65-XX)

BioHMM

Software Authors:   J. C. Marioni; N. P. Thorne; S. Tavaré
Cited in: 10 Publications (2009–2014)
Related Software: PennCNV; R; CGHclassify; AS 136; ExomeCNV; CNV-seq; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Numerical analysis (65-XX)

EnsembleQN

Software Authors:   Leimkuhler, Benedict; Matthews, Charles; Weare, Jonathan
Cited in: 13 Publications (2017–2023)
Related Software: EnKF; Rtwalk; t-walk; emcee; BayesDA; CosmoSIS; …
Main Fields: Partial differential equations (35-XX); Probability theory and stochastic processes (60-XX); Statistics (62-XX)

FACTORIE

Software Authors:   Andrew McCallum, Karl Schultz, Sameer Singh
Cited in: 11 Publications (2011–2020)
Related Software: Church; IBAL; ProbLog; BLOG; Haskell; Infer.NET; …
Main Fields: Statistics (62-XX); Computer science (68-XX); Information and communication theory, circuits (94-XX)

LMest

Software Authors:   Francesco Bartolucci, Silvia Pandolfi
Cited in: 10 Publications (2014–2022)
Related Software: R; depmixS4; msm; seqHMM; hmm.discnp; HiddenMarkov; …
Main Fields: General and overarching topics; collections (00-XX); Probability theory and stochastic processes (60-XX); Statistics (62-XX)

SYSTAT

Software Authors:   Urban, Dieter; Becker-Richter, Marion; Bruns, Thomas; Herzog, Rolf; Neuhaus, Heinz-Werner
Cited in: 12 Publications (1992–2017)
Related Software: SPSS; SAS; Stata; R; STATISTICA; EQS; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Computer science (68-XX)

hmmm

Software Authors:   Colombi Roberto; Sabrina Giordano; Manuela Cazzaro, Joseph Lang
Cited in: 11 Publications (2010–2021)
Related Software: R; cmm; CompQuadForm; CUB; ic.infer; Orthants; …
Main Fields: Combinatorics (05-XX); Probability theory and stochastic processes (60-XX); Statistics (62-XX)

Infernal

Software Authors:   Nawrocki EP, Kolbe DL, Eddy SR
Cited in: 7 Publications (2010–2018)
Related Software: Rfam; R; ClustalW; Bioconductor; Mauve; Mugsy; …
Main Fields: General and overarching topics; collections (00-XX); Statistics (62-XX); Computer science (68-XX)

iscasMc

Software Authors:   Hahn, E.M., Li, Y., Schewe, S., Turrini, A., Zhang, L.
Cited in: 11 Publications (2016–2023)
Related Software: PRISM; Storm; MRMC; Jani; Uppaal; PROPhESY; …
Main Fields: Probability theory and stochastic processes (60-XX); Computer science (68-XX); Quantum theory (81-XX)

MCAMC

Software Authors:   Novotny, M.A.; Wheeler, S.M.
Cited in: 12 Publications (1998–2022)
Related Software: MINRES; MINRES-QLP; MUMPS; PETSc; SLEPc
Main Fields: Probability theory and stochastic processes (60-XX); Numerical analysis (65-XX); Optics, electromagnetic theory (78-XX)

APNN-Toolbox

Software Authors:   Peter Buchholz; Markus Fischer; Peter Kemper; Carsten Tepper
Cited in: 11 Publications (1999–2018)
Related Software: LDQBD; PEPS; COLAMD; PEPA; StochKit; GTAEXPRESS; …
Main Fields: Linear and multilinear algebra; matrix theory (15-XX); Probability theory and stochastic processes (60-XX); Numerical analysis (65-XX)

BayesEstDiffusion.jl

Software Authors:   van der Meulen, Frank; Schauer, Moritz
Cited in: 11 Publications (2017–2022)
Related Software: Bridge.jl; Julia; ForwardDiff; CODA; EnKF; sde; …
Main Fields: Calculus of variations and optimal control; optimization (49-XX); Probability theory and stochastic processes (60-XX); Statistics (62-XX)

Hybrid Stable Spline Toolbox

Software Authors:   Pillonetto, Gianluigi
Cited in: 11 Publications (2016–2022)
Related Software: Matlab; PRMLT; GitHub; GPy; Adam; GPflow; …
Main Fields: Partial differential equations (35-XX); Probability theory and stochastic processes (60-XX); Statistics (62-XX)

DREAM

Software Authors:   Vrugt, J. A
Cited in: 10 Publications (2018–2022)
Related Software: NUTS; Glow; GitHub; Matlab; BayesDA; MADE; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Numerical analysis (65-XX)

momentuHMM

Software Authors:   Brett T. McClintock, Theo Michelot
Cited in: 8 Publications (2017–2023)
Related Software: moveHMM; R; crawl; ctmm; kftrack; ukfsst; …
Main Fields: General and overarching topics; collections (00-XX); Statistics (62-XX); Operations research, mathematical programming (90-XX)

Pi4U

Software Authors:   Hadjidoukas, P.E.; Angelikopoulos, P.; Papadimitriou, C.; Koumoutsakos, P.
Cited in: 10 Publications (2015–2023)
Related Software: CMA-ES; ABC-SubSim; TORC; PSUADE; QUESO; DAKOTA; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Mechanics of deformable solids (74-XX)

bayesTFR

Software Authors:   Hana Sevcikova; Leontine Alkema; Adrian Raftery
Cited in: 6 Publications (2014–2021)
Related Software: bayesPop; bayesLife; bayesDem; R; rworldmap; CODA; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Computer science (68-XX)

DRAGON

Software Authors:   Baker, J.
Cited in: 7 Publications (2001–2022)
Related Software: R; PRMLT; ElemStatLearn; Wasserstein GAN; AdaGrad; NUTS; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Computer science (68-XX)

LatticeKrig

Software Authors:   Douglas Nychka, Dorit Hammerling, Stephan Sain, Nathan Lenssen
Cited in: 6 Publications (2015–2022)
Related Software: FRK; R-INLA; R; INLA; spBayes; GMRFLib; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Geophysics (86-XX)

MCMC

Software Authors:   Marko Laine
Cited in: 9 Publications (2001–2023)
Related Software: NUTS; GPstuff; TOMS659; EGO; energy; MCSim; …
Main Fields: Ordinary differential equations (34-XX); Statistics (62-XX); Numerical analysis (65-XX)

BASS

Software Authors:   Arjas, E.; Mannila, H.; Salmenkivi, M.; Suramo, R.; Toivonen, H.
Cited in: 8 Publications (1996–2012)
Related Software:
Main Fields: General and overarching topics; collections (00-XX); Statistics (62-XX); Computer science (68-XX)

GlobalAncova

Software Authors:   U. Mansmann, R. Meister, M. Hummel, R. Scheufele, S. Knueppel
Cited in: 4 Publications (2012–2022)
Related Software: R; limma; GSA; gcrma; Bioconductor; graphite; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Biology and other natural sciences (92-XX)

KinasePhos

Software Authors:   Wong, Y. H.; Lee, T. Y.; Liang, H. K.
Cited in: 3 Publications (2010–2015)
Related Software: Phospho.ELM; AutoMotif; LIBSVM; Signal-CF; iSNO-AAPair; Java Treeview; …
Main Fields: Statistics (62-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)

MCINTYRE

Software Authors:   Riguzzi, F.
Cited in: 7 Publications (2015–2019)
Related Software: ProbLog; PITA; CP-logic; PRISM; cplint; SWI-Prolog; …
Main Fields: Computer science (68-XX)

MNP

Software Authors:   Imai, K.; Van Dyk, D. A.
Cited in: 5 Publications (2005–2017)
Related Software: R; bayesm; Mcmcpack; mnlogit; RSGHB; Mlogit; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Numerical analysis (65-XX)

qtlbim

Software Authors:   Shriner, Daniel; Yi, Nengjun
Cited in: 6 Publications (2009–2021)
Related Software: BayesDA; R; QTL Express; ASReml; qtl; BayesQTLBIC; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Astronomy and astrophysics (85-XX)

BAPS 2

Software Authors:   Jukka Corander, Patrik Waldmann, Pekka Marttinen, Mikko J. Sillanpää
Cited in: 6 Publications (2007–2015)
Related Software: STRUCTURE; iCDI-PseFpt; iEzy-drug; iNuc-PhysChem; iNitro-Tyr; iRSpot-PseDNC; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Computer science (68-XX)

BAT

Software Authors:   Caldwell, Allen; Kollar, Daniel; Kröninger, Kevin
Cited in: 6 Publications (2009–2018)
Related Software: HEPfit; Turing; Cuba; Optim; WinBUGS; R; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Quantum theory (81-XX)

BITE

Software Authors:   Tommi Härkänen
Cited in: 7 Publications (2003–2014)
Related Software: Intcox; CRAN; bayesSurv; survBayes; R; Bassist; …
Main Fields: Combinatorics (05-XX); Statistics (62-XX); Numerical analysis (65-XX)

EasyGene

Software Authors:   Larsen, T., Krogh, A.
Cited in: 3 Publications (2007–2017)
Related Software: InterProScan; Prodigal; BLAST; PSI-BLAST; ClustalW; GeneMarkS; …
Main Fields: General and overarching topics; collections (00-XX); Probability theory and stochastic processes (60-XX); Statistics (62-XX)

GeneScout

Software Authors:   Yin, Michael M.; Wang, Jason T.L
Cited in: 3 Publications (2007–2009)
Related Software: iPiG; KNIME; MyriMatch; Peppy; PGTools; PGx; …
Main Fields: Computer science (68-XX); Information and communication theory, circuits (94-XX)

GenRGenS

Software Authors:   Yann Ponty; Michel Termier; Alain Denise
Cited in: 6 Publications (2008–2013)
Related Software: gfun; Mfold; Geno; SpecExplorer; DART; CONDOR; …
Main Fields: Combinatorics (05-XX); Computer science (68-XX); Statistical mechanics, structure of matter (82-XX)

MHadaptive

Software Authors:   Corey Chivers
Cited in: 7 Publications (2013–2022)
Related Software: R; BayesDA; GPC; rr; SPLIDA; repeated; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Numerical analysis (65-XX)

PICNIC

Software Authors:   Greenman CD, Bignell G, Butler A, Edkins S, Hinton J, Beare D, Swamy S, Santarius T, Chen L, Widaa S, Futreal PA, Stratton MR
Cited in: 5 Publications (2010–2022)
Related Software: PLASQ; CARAT; GenoSNP; BRLMM; oligo; Repitools; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Computer science (68-XX)

SemiMarkov

Software Authors:   Agnieszka Listwon-Krol, Philippe Saint-Pierre
Cited in: 3 Publications (2018–2021)
Related Software: R; mstate; msm; p3state.msm; SMM; mhsmm; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Game theory, economics, finance, and other social and behavioral sciences (91-XX)

BDI-POMDP

Software Authors:   Nair, R.; Tambe, M.
Cited in: 3 Publications (2005–2011)
Related Software: Jason; PSPLIB; BioWar; Boids; TuCSoN; LIME
Main Fields: Computer science (68-XX); Operations research, mathematical programming (90-XX); Game theory, economics, finance, and other social and behavioral sciences (91-XX)

CARBayesST

Software Authors:   Duncan Lee, Alastair Rushworth, Gary Napier
Cited in: 4 Publications (2021–2023)
Related Software: CARBayes; spTimer; R; CARBayesdata; Rcpp; CODA; …
Main Fields: Statistics (62-XX); Biology and other natural sciences (92-XX)

COSMOS

Software Authors:   Ballarini, P., Djafri, H., Duflot, M., Haddad, S., Pekergin, N.
Cited in: 6 Publications (2013–2021)
Related Software: PRISM; Ymer; VESTA; HASL; Uppaal; StochKit; …
Main Fields: Computer science (68-XX); Biology and other natural sciences (92-XX)

GeneMarkS

Software Authors:   Besemer J, Lomsadze A, Borodovsky M
Cited in: 4 Publications (2004–2017)
Related Software: UniProt; InterProScan; EasyGene; Prodigal; R; EMBOSS; …
Main Fields: General and overarching topics; collections (00-XX); Probability theory and stochastic processes (60-XX); Computer science (68-XX)

GMNN

Software Authors:   Meng Qu, Yoshua Bengio, Jian Tang
Cited in: 6 Publications (2020–2022)
Related Software: NetKit; struc2vec; GraphVAE; NetGAN; DeepWalk; GraphRNN; …
Main Fields: Combinatorics (05-XX); Statistics (62-XX); Computer science (68-XX)

HMMmix

Software Authors:   Stevenn Volant; Caroline Berard
Cited in: 6 Publications (2014–2021)
Related Software: CAPUSHE; CMA-ES; TAHMMAnnot; mclust; R; CRAN
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Statistical mechanics, structure of matter (82-XX)

Kpc-toolbox

Software Authors:   Casale, G.; Zhang, E. Z.; Smirni, E.
Cited in: 5 Publications (2012–2020)
Related Software: PhFit; R; EMpht; JMT; actuar; HyperStar; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Numerical analysis (65-XX)

muq

Software Authors:   M. Parno, A. Davis, P. Conrad
Cited in: 5 Publications (2016–2022)
Related Software: UQLab; UQTk; QUESO; DAKOTA; BayesDA; Travis CI; …
Main Fields: Partial differential equations (35-XX); Operator theory (47-XX); Statistics (62-XX)

phmm

Software Authors:   Michael Donohue, Ronghui Xu
Cited in: 2 Publications (2017)
Related Software: coxme; survival; R; frailtypack; parfm; frailtyHL; …
Main Fields: Statistics (62-XX); Biology and other natural sciences (92-XX)

REDD

Software Authors:   Kolter, J. Z.; Johnson, M. J.
Cited in: 5 Publications (2013–2022)
Related Software: Pyomo; Gurobi; Valgrind; GREEND; Infer.NET
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Computer science (68-XX)

Regexpcount

Software Authors:   Nicodème, Pierre
Cited in: 6 Publications (2003–2014)
Related Software: Maple; RSEARCH; fastDNAml; Rfam
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Numerical analysis (65-XX)

rjmcmc

Software Authors:   Nick Gelling, Matthew R. Schofield, Richard J. Barker
Cited in: 4 Publications (2013–2019)
Related Software: R; JAGS; R2jags; CODA; Stan; bridgesampling; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Numerical analysis (65-XX)

tdc.msm

Software Authors:   Meira-Machado L, Cadarso-Suárez C, de Uña-Alvarez J.
Cited in: 2 Publications (2010)
Related Software: msm; p3state.msm; R; changelos; mstate; survival; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Numerical analysis (65-XX)

TRAMP

Software Authors:   Zhuo, Hankz Hankui; Yang, Qiang
Cited in: 6 Publications (2014–2022)
Related Software: PDDL; UCPOP; TEXPLORE; PrefixSpan; Prodigy; SPADE; …
Main Fields: Computer science (68-XX)

VanillaICE

Software Authors:   Robert Scharpf; Kevin Scharpf; Ingo Ruczinski
Cited in: 2 Publications (2008–2010)
Related Software: R; PennCNV; BRLMM; snow; DNAcopy; lattice; …
Main Fields: Statistics (62-XX); Operations research, mathematical programming (90-XX); Biology and other natural sciences (92-XX)

AMYTISS

Software Authors:   Lavaei, Abolfazl; Khaled, Mahmoud; Soudjani, Sadegh; Zamani, Majid
Cited in: 5 Publications (2020–2023)
Related Software: FAUST2; StocHy; SReach; ProbReach; PRISM; SCOTS; …
Main Fields: Computer science (68-XX); Operations research, mathematical programming (90-XX); Game theory, economics, finance, and other social and behavioral sciences (91-XX)

Bio-PEPAd

Software Authors:   Caravagna, Giulio; Hillston, Jane
Cited in: 4 Publications (2012–2015)
Related Software: Bio-PEPA; LBS; PRISM; BIOCHAM; UMDES; BlenX; …
Main Fields: Computer science (68-XX); Biology and other natural sciences (92-XX)

BMIRT ToolKit

Software Authors:   Yao, Lihua
Cited in: 3 Publications (2012–2018)
Related Software: R; ltm; TESTFACT; eRm; plink; MULTILOG; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX)

FragGeneScan

Software Authors:   Rho M, Tang H, Ye Y
Cited in: 5 Publications (2012–2022)
Related Software: ClustalW; SPAdes; JBROWSE; InterProScan; MAKER; EasyGene; …
Main Fields: General and overarching topics; collections (00-XX); Probability theory and stochastic processes (60-XX); Operations research, mathematical programming (90-XX)

GEMMA

Software Authors:   Zhou, Xiang
Cited in: 5 Publications (2017–2021)
Related Software: PLINK; GitHub; GWAS Catalog; REMI; GCTA; ElemStatLearn; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Biology and other natural sciences (92-XX)

GlimmerHMM

Software Authors:   W. H. Majoros, M. Pertea, S. L. Salzberg
Cited in: 3 Publications (2007–2013)
Related Software: TigrScan; BioHMM; PICNIC; GeneWise; MetaGeneAnnotator; Digit; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Biology and other natural sciences (92-XX)

hergm

Software Authors:   Michael Schweinberger; Pamela Luna
Cited in: 0 Publications
Related Software: R; ergm; statnet; igraph; epinet; Bergm; …
Main Fields: