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Found 874 Software Packages (Results 1–100)

Python

Software Authors:   Guido van Rossum
Cited in: 1,165 Publications (1991–2023)
Related Software: SciPy; NumPy; Matplotlib; Scikit; Matlab; PyTorch; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Computer science (68-XX)

PETSc

Software Authors:   S. Balay, W.D. Gropp, L.C. McInnes, B.F. Smith
Cited in: 1,598 Publications (1996–2023)
Related Software: FEniCS; hypre; MUMPS; SLEPc; Trilinos; Gmsh; …
Main Fields: Partial differential equations (35-XX); Numerical analysis (65-XX); Mechanics of deformable solids (74-XX)

SciPy

Software Authors:   Jones, E., Oliphant, T., Peterson, P., et al.
Cited in: 586 Publications (2005–2023)
Related Software: Python; NumPy; Matplotlib; Scikit; GitHub; TensorFlow; …
Main Fields: Partial differential equations (35-XX); Statistics (62-XX); Numerical analysis (65-XX)

Matplotlib

Software Authors:   John Hunter, Darren Dale, Eric Firing, Michael Droettboom and the matplotlib development team
Cited in: 238 Publications (2007–2023)
Related Software: Python; NumPy; SciPy; Scikit; pandas; IPython; …
Main Fields: Partial differential equations (35-XX); Numerical analysis (65-XX); Computer science (68-XX)

Keras

Software Authors:   F. Chollet
Cited in: 200 Publications (2017–2023)
Related Software: TensorFlow; Adam; Scikit; GitHub; ImageNet; Python; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Computer science (68-XX)

DOLFIN

Software Authors:   Anders Logg, Johan Hoffman, Garth N. Wells, Johan Jansson, Ola Skavhaug, Kent-Andre Mardal, Martin Sandve Alnes, Johan Hake, Niclas Jansson, Johannes Ring, Kristian B. Ølgaard, Marie Rognes
Cited in: 198 Publications (2004–2023)
Related Software: FEniCS; PETSc; UFL; Python; SyFi; deal.ii; …
Main Fields: Partial differential equations (35-XX); Calculus of variations and optimal control; optimization (49-XX); Numerical analysis (65-XX)

SymPy

Software Authors:   SymPy Development Team; Joyner, David; Čertík, Ondřej; Meurer, Aaron; Granger, Brian E.
Cited in: 152 Publications (2010–2023)
Related Software: Python; NumPy; SciPy; Matplotlib; Mathematica; Matlab; …
Main Fields: Partial differential equations (35-XX); Numerical analysis (65-XX); Computer science (68-XX)

NLopt

Software Authors:   Johnson, S.G.
Cited in: 108 Publications (2012–2022)
Related Software: R; GitHub; BOBYQA; Ipopt; nloptr; SciPy; …
Main Fields: Calculus of variations and optimal control; optimization (49-XX); Statistics (62-XX); Numerical analysis (65-XX)

VTK

Software Authors:   W. Schroeder, L. Avila, K. Martin, W. Hoffman, C. Law
Cited in: 74 Publications (2000–2022)
Related Software: Python; ParaView; Matplotlib; NumPy; SciPy; Gmsh; …
Main Fields: Numerical analysis (65-XX); Computer science (68-XX); Mechanics of deformable solids (74-XX)

Theano

Software Authors:   J. Bergstra, O. Breuleux, F. Bastien, P. Lamblin, R. Pascanu, G. Desjardins, J. Turian, D. Warde-Farley, Y. Bengio.
Cited in: 67 Publications (2012–2022)
Related Software: TensorFlow; PyTorch; Adam; Python; Keras; SciPy; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Computer science (68-XX)

pandas

Software Authors:   Wes McKinney
Cited in: 18 Publications (2016–2023)
Related Software: Python; NumPy; SciPy; Matplotlib; Scikit; Seaborn; …
Main Fields: General and overarching topics; collections (00-XX); Statistics (62-XX); Numerical analysis (65-XX)

DeepXDE

Software Authors:   Lu Lu, Xuhui Meng, Zhiping Mao, George E. Karniadakis
Cited in: 80 Publications (2019–2023)
Related Software: Adam; DGM; PyTorch; FPINNs; DiffSharp; TensorFlow; …
Main Fields: Partial differential equations (35-XX); Numerical analysis (65-XX); Computer science (68-XX)

CVXOPT

Software Authors:   Martin Andersen; Joachim Dahl; Lieven Vandenberghe
Cited in: 63 Publications (2008–2022)
Related Software: SeDuMi; Python; YALMIP; CVX; ECOS; Mosek; …
Main Fields: Calculus of variations and optimal control; optimization (49-XX); Statistics (62-XX); Numerical analysis (65-XX)

BEM++

Software Authors:   Simon Arridge, Timo Betcke, Richard James, Nicolas Salles, Martin Schweiger, Wojciech Śmigaj
Cited in: 66 Publications (2013–2022)
Related Software: NGSolve; hlib; Python; DLMF; FEniCS; Gmsh; …
Main Fields: Partial differential equations (35-XX); Integral equations (45-XX); Numerical analysis (65-XX)

Getfem++

Software Authors:   Yves Renard, Julien Pommier
Cited in: 64 Publications (2004–2022)
Related Software: deal.ii; Gmsh; XFEM; PETSc; FreeFem++; FEniCS; …
Main Fields: Partial differential equations (35-XX); Calculus of variations and optimal control; optimization (49-XX); Numerical analysis (65-XX)

mpmath

Software Authors:   Fredrik Johansson
Cited in: 62 Publications (2010–2022)
Related Software: SageMath; SciPy; Mathematica; SymPy; Python; DLMF; …
Main Fields: Number theory (11-XX); Special functions (33-XX); Numerical analysis (65-XX)

Hyperopt

Software Authors:   Bergstra, J.S., Bardenet, R., Bengio, Y., Kégl, B.
Cited in: 49 Publications (2015–2022)
Related Software: Spearmint; SMAC; Scikit; Auto-WEKA; Hyperband; Adam; …
Main Fields: Partial differential equations (35-XX); Statistics (62-XX); Numerical analysis (65-XX)

DeepLab

Software Authors:   Liang-Chieh Chen, George Papandreou, Iasonas Kokkinos, Kevin Murphy, Alan L. Yuille
Cited in: 45 Publications (2018–2022)
Related Software: ImageNet; Faster R-CNN; MS-COCO; AlexNet; U-Net; PASCAL VOC; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Computer science (68-XX)

Feel++

Software Authors:   Christophe Prud'homme, Vincent Chabannes, Stéphane Veys, Abdoulaye Samake, Cecile Daversin, Christophe Trophime, Goncalo Pena, Guillaume Dollé, Jean-Baptiste Wahl, Mourad Ismail, Ranine Tarabay, Vincent Doyeux, Vincent Huber
Cited in: 38 Publications (1999–2023)
Related Software: PETSc; FreeFem++; FEniCS; deal.ii; Gmsh; Firedrake; …
Main Fields: Partial differential equations (35-XX); Numerical analysis (65-XX); Computer science (68-XX)

PyAMG

Software Authors:   Bell, W. N.; Olson, L. N.; Schroder, J. B.
Cited in: 35 Publications (2010–2022)
Related Software: hypre; BoomerAMG; GitHub; Python; SciPy; Getfem++; …
Main Fields: Partial differential equations (35-XX); Calculus of variations and optimal control; optimization (49-XX); Numerical analysis (65-XX)

FLANN

Software Authors:   Marius Muja; David G. Lowe
Cited in: 35 Publications (2011–2023)
Related Software: GitHub; UCI-ml; k-means++; MNIST; HyperLogLog; Adam; …
Main Fields: Statistics (62-XX); Computer science (68-XX); Mechanics of deformable solids (74-XX)

George

Software Authors:   Daniel Foreman-Mackey
Cited in: 28 Publications (2016–2022)
Related Software: GPvecchia; hlib; H2Lib; H2Pack; GitHub; STRUMPACK; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Numerical analysis (65-XX)

POT

Software Authors:   Flamary, R., Courty, N.
Cited in: 29 Publications (2018–2022)
Related Software: GitHub; Wasserstein GAN; DiffSharp; EMD; BigGAN; pix2pix; …
Main Fields: Partial differential equations (35-XX); Calculus of variations and optimal control; optimization (49-XX); Statistics (62-XX)

preCICE

Software Authors:   Hans-Joachim Bungartz, Gerasimos Chourdakis, Kyle Davis, Berhard Gatzhammer, Florian Lindner, Miriam Mehl, Alexander Rusch, Benjamin Rüth, Klaudius Scheufele, Frédéric Simonis, Amin Totounferoush, Benjamin Uekermann
Cited in: 26 Publications (2010–2022)
Related Software: MpCCI; deal.ii; MUI; OpenFOAM; FEniCS; UMFPACK; …
Main Fields: Numerical analysis (65-XX); Computer science (68-XX); Mechanics of deformable solids (74-XX)

GPflow

Software Authors:   Matthews, Alexander G.De G.; van der Wilk, Mark; Nickson, Tom; Fujii, Keisuke; Boukouvalas, Alexis; León-Villagrá, Pablo; Ghahramani, Zoubin; Hensman, James
Cited in: 21 Publications (2017–2023)
Related Software: TensorFlow; GPy; Adam; Python; GPML; GPyTorch; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Computer science (68-XX)

Seaborn

Software Authors:   M. Waskom, O. Botvinnik, D. Okane, P. Hobson, David, Y. Halchenko, S. Lukauskas, J. B. Cole, J. Warmenhoven, J. de Ruiter, S. Hoyer, J. Vanderplas, S. Villalba, G. Kunter, E. Quintero, M. Martin, A. Miles, K. Meyer, T. Augspurger, T. Yarkoni, P. Bachant, M. Williams, C. Evans, C. Fitzgerald, Brian, D. Wehner, G. Hitz, E. Ziegler, A. Qalieh, and A. Lee.
Cited in: 8 Publications (2018–2022)
Related Software: Python; Matplotlib; NumPy; pandas; SciPy; Scikit; …
Main Fields: Algebraic geometry (14-XX); Statistics (62-XX); Computer science (68-XX)

GetDist

Software Authors:   Lewis, Anthony
Cited in: 21 Publications (2018–2021)
Related Software: CAMB; CLASS; SciPy; emcee; NumPy; Matplotlib; …
Main Fields: Partial differential equations (35-XX); Fluid mechanics (76-XX); Optics, electromagnetic theory (78-XX)

hIPPYlib

Software Authors:   Villa, U.; Petra, N.; Ghattas, O.
Cited in: 22 Publications (2017–2022)
Related Software: FEniCS; SyFi; PETSc; LBFGS-B; SciPy; PETSc/TS; …
Main Fields: Partial differential equations (35-XX); Calculus of variations and optimal control; optimization (49-XX); Statistics (62-XX)

SALib

Software Authors:   Jon Herman, Will Usher
Cited in: 17 Publications (2018–2022)
Related Software: Python; GitHub; SAFE Toolbox; sensitivity; FEniCS; SciPy; …
Main Fields: Ordinary differential equations (34-XX); Statistics (62-XX); Mechanics of deformable solids (74-XX)

oTree

Software Authors:   Chen, D.L.; Schonger, M.; Wickens, C.
Cited in: 22 Publications (2017–2022)
Related Software: ORSEE; Z-Tree; hroot; PrefLib; SoSci Survey
Main Fields: Statistics (62-XX); Operations research, mathematical programming (90-XX); Game theory, economics, finance, and other social and behavioral sciences (91-XX)

pyMOR

Software Authors:   Rene Milk, Stephan Rave, Felix Schindler
Cited in: 21 Publications (2015–2022)
Related Software: redbKIT; DUNE; libMesh; hapod; FEniCS; deal.ii; …
Main Fields: Partial differential equations (35-XX); Numerical analysis (65-XX); Computer science (68-XX)

Eclat

Software Authors:   Christian Borgelt
Cited in: 13 Publications (2008–2022)
Related Software: Apriori; gSpan; UCI-ml; arules; R; APRIORI; …
Main Fields: Combinatorics (05-XX); Statistics (62-XX); Computer science (68-XX)

Pyclaw

Software Authors:   Ketcheson, David I.; Mandli, Kyle; Ahmadia, Aron J.; Alghamdi, Amal; De Luna, Manuel Quezada; Parsani, Matteo; Knepley, Matthew G.; Emmett, Matthew
Cited in: 19 Publications (2012–2022)
Related Software: PyWENO; CLAWPACK; SharpClaw; PETSc; NumPy; Python; …
Main Fields: Partial differential equations (35-XX); Numerical analysis (65-XX); Mechanics of deformable solids (74-XX)

ODL

Software Authors:   Jonas Adler, Holger Kohr, Ozan Öktem
Cited in: 17 Publications (2017–2022)
Related Software: ASTRA; Adam; GitHub; TensorFlow; PyTorch; DeepAdverserialRegulariser; …
Main Fields: Numerical analysis (65-XX); Computer science (68-XX); Operations research, mathematical programming (90-XX)

pybind11

Software Authors:   Jakob Wenzel et al
Cited in: 2 Publications (2021–2022)
Related Software: Python; NumPy; SciPy; Matplotlib; Scikit; PETSc; …
Main Fields: Computer science (68-XX); Systems theory; control (93-XX)

SHTns

Software Authors:   Nathanael Schaeffer
Cited in: 18 Publications (2008–2022)
Related Software: Python; FFTW; pySDC; chammp; DLMF; PARDISO; …
Main Fields: Partial differential equations (35-XX); Probability theory and stochastic processes (60-XX); Numerical analysis (65-XX)

ASE

Software Authors:   Hjorth Larsen, A.; Jørgen Mortensen, J.; Blomqvist, J.; Castelli, I. E.; Christensen, R.; Dułak, M.; Friis, J.; Groves, M. N.; Hammer, B.; Hargus, C.; Hermes, E. D.; Jennings, P. C.; Bjerre Jensen, P.; Kermode, J.; Kitchin, J. R.; Leonhard Kolsbjerg, E.; 14 Kubal, J.; Kaasbjerg, K.; Lysgaard, S.; Bergmann Maronsson, J.; Maxson, T.; Olsen, T.; Pastewka, L.; Peterson, A.; Rostgaard, C.; Schiøtz, J.; Schütt, O.; Strange, M.; Thygesen, K.; Vegge, T.; Vilhelmsen, L.; Walter, M.; Zeng, Z.; Jacobsen, K. W
Cited in: 3 Publications (2019–2022)
Related Software: Python; pymatgen; NumPy; SciPy; Spglib; Atomate; …
Main Fields: Probability theory and stochastic processes (60-XX); Mechanics of deformable solids (74-XX); Fluid mechanics (76-XX)

Dlib-ml

Software Authors:   Davis E. King
Cited in: 15 Publications (2014–2023)
Related Software: Python; Scikit; Adam; Matlab; PyTorch; NLTK; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Computer science (68-XX)

Edward

Software Authors:   Tran, D., Kucukelbir, A., Dieng, A. B., Rudolph, M., Liang, D., Blei, D. M.
Cited in: 13 Publications (2017–2022)
Related Software: Stan; TensorFlow; ADVI; PyMC; Theano; NUTS; …
Main Fields: Dynamical systems and ergodic theory (37-XX); Statistics (62-XX); Numerical analysis (65-XX)

Pynn

Software Authors:   A.P. Davison, D. Brüderle, J. Eppler, J. Kremkow, E. Muller, D. Pecevski, L. Perrinet, P. Yger
Cited in: 8 Publications (2011–2021)
Related Software: NEST; NEURON; Brian; Python; SpiNNaker; PyNEST; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Computer science (68-XX)

BIOGEME

Software Authors:   Bierlaire, Michel
Cited in: 15 Publications (2006–2021)
Related Software: DONLP2; CFSQP; micEcon; pandas; zioprobit; gidm; …
Main Fields: Statistics (62-XX); Operations research, mathematical programming (90-XX); Game theory, economics, finance, and other social and behavioral sciences (91-XX)

pymatgen

Software Authors:   Ong, S. P.; Richards, W. D.; Jain, A.; Hautier, G.; Kocher, M.; Cholia, S.; Gunter, D.; Chevrier, V. L.; Persson, K. A.; Ceder, G.
Cited in: 3 Publications (2017–2022)
Related Software: Python; ASE; Matplotlib; SciPy; Spglib; NumPy; …
Main Fields: Group theory and generalizations (20-XX); Convex and discrete geometry (52-XX); Manifolds and cell complexes (57-XX)

pySecDec

Software Authors:   S. Borowka, G. Heinrich, S. Jahn, S.P. Jones, M. Kerner, J. Schlenk, T. Zirke
Cited in: 12 Publications (2017–2022)
Related Software: Reduze; FIESTA; FORM; SecDec; Kira; LiteRed; …
Main Fields: Approximations and expansions (41-XX); Numerical analysis (65-XX); Quantum theory (81-XX)

ROPTLIB

Software Authors:   Huang, Wen; Absil, P.-A.; Gallivan, Kyle A.; Hand, Paul
Cited in: 12 Publications (2017–2022)
Related Software: Manopt; Pymanopt; ManifoldOptim; Manopt.jl; UCI-ml; SDPLR; …
Main Fields: Calculus of variations and optimal control; optimization (49-XX); Differential geometry (53-XX); Numerical analysis (65-XX)

spaCy

Software Authors:   spaCy GmbH; Matthew Honnibal; Ines Montani
Cited in: 0 Publications
Related Software: Python; NLTK; AllenNLP; BERT; StanfordCoreNLP; Transformers; …
Main Fields:

FALCONN

Software Authors:   Ilya Razenshteyn; Ludwig Schmidt
Cited in: 15 Publications (2017–2021)
Related Software: GitHub; annoy; GloVe; LEMP; FLANN; PRMLT; …
Main Fields: Number theory (11-XX); Statistics (62-XX); Computer science (68-XX)

FINUFFT

Software Authors:   Barnett, Alexander H.; Magland, Jeremy; af Klinteberg, Ludvig
Cited in: 15 Publications (2019–2022)
Related Software: NFFT3; NFFT; DLMF; FFTW; GitHub; BART; …
Main Fields: Partial differential equations (35-XX); Statistics (62-XX); Numerical analysis (65-XX)

GiNaC-cycle

Software Authors:   Vladimir V. Kisil
Cited in: 14 Publications (2004–2022)
Related Software: GiNaC; MetaPost; Asymptote; Noweb; Python; Kig; …
Main Fields: Linear and multilinear algebra; matrix theory (15-XX); Functions of a complex variable (30-XX); Geometry (51-XX)

TensorLy

Software Authors:   Jean Kossaifi, Yannis Panagakis, Anima Anandkumar, Maja Pantic
Cited in: 10 Publications (2019–2022)
Related Software: PyTorch; TensorFlow; GitHub; NumPy; Scikit; Python; …
Main Fields: Linear and multilinear algebra; matrix theory (15-XX); Category theory; homological algebra (18-XX); Numerical analysis (65-XX)

libSBML

Software Authors:   B. J. Bornstein, S. M. Keating, A. Jouraku, M. Hucka
Cited in: 4 Publications (2009–2022)
Related Software: SimpleSBML; Python; COPASI; PySB; BioNetGen; sbtoolbox; …
Main Fields: Ordinary differential equations (34-XX); Numerical analysis (65-XX); Operations research, mathematical programming (90-XX)

NetworKit

Software Authors:   Christian L. Staudt, Aleksejs Sazonovs, Henning Meyerhenke
Cited in: 14 Publications (2015–2020)
Related Software: SNAP; KONECT; Hyperbolic graph generator; NetworkX; LAMG; igraph; …
Main Fields: Combinatorics (05-XX); Numerical analysis (65-XX); Computer science (68-XX)

Pysal

Software Authors:   Rey SJ, Anselin L
Cited in: 5 Publications (2014–2021)
Related Software: Python; GeoPandas; R; SpaceStat; ArcGIS; GeoDa; …
Main Fields: Measure and integration (28-XX); Dynamical systems and ergodic theory (37-XX); Statistics (62-XX)

G6K

Software Authors:   Albrecht, Martin R.; Ducas, Léo; Herold, Gottfried; Kirshanova, Elena; Postlethwaite, Eamonn W.; Stevens, Marc
Cited in: 13 Publications (2019–2022)
Related Software: BKZ; fpLLL; GitHub; NTL; fpylll; Eigen; …
Main Fields: Number theory (11-XX); Convex and discrete geometry (52-XX); Computer science (68-XX)

MVF

Software Authors:   Adorio, E.P., Dilman, U.P.
Cited in: 12 Publications (2012–2023)
Related Software: Matlab; AMPGO; MCS; LGO; CEC 05; KNITRO; …
Main Fields: Partial differential equations (35-XX); Dynamical systems and ergodic theory (37-XX); Numerical analysis (65-XX)

PySMT

Software Authors:   Marco Gario, Andrea Micheli
Cited in: 11 Publications (2017–2022)
Related Software: z3; Yices; MathSAT5; CVC4; SMT-LIB; CTIGAR; …
Main Fields: Mathematical logic and foundations (03-XX); Ordinary differential equations (34-XX); Computer science (68-XX)

CuPy

Software Authors:   Ryosuke Okuta, Yuya Unno, Daisuke Nishino, Shohei Hido, Crissman Loomis
Cited in: 6 Publications (2021–2022)
Related Software: Python; NumPy; TensorFlow; PyTorch; SciPy; JAX; …
Main Fields: Numerical analysis (65-XX); Computer science (68-XX); Mechanics of deformable solids (74-XX)

exafmm

Software Authors:   R. Yokota; L. A. Barba
Cited in: 9 Publications (2018–2022)
Related Software: pvfmm; HOT; TBFMM; Bempp-cl; Python; ScalFMM; …
Main Fields: Partial differential equations (35-XX); Numerical analysis (65-XX); Fluid mechanics (76-XX)

Graph-tool

Software Authors:   Peixoto, T. P.
Cited in: 4 Publications (2016–2022)
Related Software: NetworkX; Python; igraph; NumPy; SciPy; Scikit; …
Main Fields: Combinatorics (05-XX); Statistics (62-XX); Computer science (68-XX)

RBniCS

Software Authors:   Francesco Ballarin, Gianluigi Rozza and contributors
Cited in: 12 Publications (2016–2020)
Related Software: FEniCS; redbKIT; rbMIT; FreeFem++; SyFi; ECLIPSE; …
Main Fields: Partial differential equations (35-XX); Calculus of variations and optimal control; optimization (49-XX); Numerical analysis (65-XX)

StOpt

Software Authors:   Hugo Gevret, Nicolas Langrené, Jerome Lelong, Xavier Warin, Aditya Maheshwari
Cited in: 10 Publications (2017–2022)
Related Software: KernSmooth; MSPPy; StructDualDynProg.jl; StochDynamicProgramming.jl; SDDP; JuMP; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Numerical analysis (65-XX)

Wilson

Software Authors:   Jason Aebischer, Jacky Kumar, David M. Straub
Cited in: 5 Publications (2018–2022)
Related Software: DsixTools; flavio; MatchingTools; CoDEx; SMEFTsim; SmeftFR; …
Main Fields: Quantum theory (81-XX); Relativity and gravitational theory (83-XX)

mdp

Software Authors:   T. Zito, N. Wilbert, L. Wiskott, P. Berkes
Cited in: 8 Publications (2010–2020)
Related Software: Python; NumPy; SciPy; PyBrain; SPHINX; Natter; …
Main Fields: Statistics (62-XX); Computer science (68-XX); Game theory, economics, finance, and other social and behavioral sciences (91-XX)

PyDEC

Software Authors:   Nathan Bell; Anil N. Hirani
Cited in: 10 Publications (2012–2023)
Related Software: SciPy; PersistenceImages; TopologyNet; Ripser; GitHub; SW1PerS; …
Main Fields: Partial differential equations (35-XX); Calculus of variations and optimal control; optimization (49-XX); Algebraic topology (55-XX)

viridis

Software Authors:   Simon Garnier, Noam Ross, Bob Rudis
Cited in: 4 Publications (2020–2022)
Related Software: R; ggplot2; dplyr; shiny; GitHub; survival; …
Main Fields: Dynamical systems and ergodic theory (37-XX); Statistics (62-XX); Numerical analysis (65-XX)

CTL

Software Authors:   Rainer Niekamp
Cited in: 10 Publications (2007–2016)
Related Software: FEAP; OpenFOAM; Matlab; coFeap; ARPACK; MUMPS; …
Main Fields: Mathematical logic and foundations (03-XX); Numerical analysis (65-XX); Computer science (68-XX)

DendroPy

Software Authors:   Sukumaran, J.; Mark T. Holder
Cited in: 6 Publications (2017–2022)
Related Software: Biopython; Python; RAxML; INDELible; ASTRAL-II; ETE; …
Main Fields: General and overarching topics; collections (00-XX); Linear and multilinear algebra; matrix theory (15-XX); Statistics (62-XX)

flavio

Software Authors:   D.M. Straub, et al.
Cited in: 5 Publications (2019–2022)
Related Software: Wilson; FormFlavor; DsixTools; FeynRules; Python; SMEFTsim; …
Main Fields: Statistics (62-XX); Quantum theory (81-XX); Relativity and gravitational theory (83-XX)

healpy

Software Authors:   Cyrille Rosset; Andrea Zonca; Martin Reinecke; Leo Singer; Daniel Lenz
Cited in: 6 Publications (2019–2021)
Related Software: Healpix; Python; NumPy; SciPy; Astropy; Matplotlib; …
Main Fields: Statistics (62-XX); Optics, electromagnetic theory (78-XX); Quantum theory (81-XX)

MatchingTools

Software Authors:   Juan C. Criado
Cited in: 4 Publications (2018–2020)
Related Software: DsixTools; Wilson; CoDEx; Rosetta; DEFT; FeynRules; …
Main Fields: Quantum theory (81-XX); Relativity and gravitational theory (83-XX)

OpenMM

Software Authors:   OpenMM team, Stanford University; P. Eastman, M.S. Friedrichs, J.D. Chodera, R.J. Radmer, C.M. Bruns, J.P. Ku, K.A. Beauchamp, T.J. Lane, L.P. Wang, D. Shukla, T. Tye, M. Houston, T. Stich, C. Klein, M.R. Shirts, V.S. Pande
Cited in: 6 Publications (2015–2022)
Related Software: Gromacs; Python; CUDA; PyTorch; VMD; AMBER; …
Main Fields: Number theory (11-XX); Numerical analysis (65-XX); Fluid mechanics (76-XX)

PyBrain

Software Authors:   T. Schaul, J. Bayer, D. Wierstra, Y. Sun, M. Felder, F. Sehnke, T. Rückstieß, J. Schmidhuber
Cited in: 6 Publications (2011–2016)
Related Software: Python; SHOGUN; Orange; Scikit; Cython; NumPy; …
Main Fields: Statistics (62-XX); Computer science (68-XX); Quantum theory (81-XX)

zfp

Software Authors:   Peter Lindstrom
Cited in: 10 Publications (2005–2022)
Related Software: GitHub; mctoolbox; EnerJ; FPTuner; Thrust; CUBLAS; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Computer science (68-XX)

APFEL

Software Authors:   Bertone, Valerio; Carrazza, Stefano; Rojo, Juan
Cited in: 7 Publications (2014–2020)
Related Software: LHAPDF; QCDNUM16; MadGraph5_aMC@NLO; SHERPA; PYTHIA8; POWHEG BOX; …
Main Fields: Quantum theory (81-XX)

CRAG

Software Authors:   Alex Myasnikov; Diekert, Volker; Laun, Jürn; Ushakov, Alexander
Cited in: 9 Publications (2010–2021)
Related Software: WalnutDSA; GitHub
Main Fields: Group theory and generalizations (20-XX); Computer science (68-XX); Information and communication theory, circuits (94-XX)

MDAnalysis

Software Authors:   Gowers, R. J.; Linke, M.; Barnoud, J.; Reddy, T. J.E.; Melo, M. N.; Seyler, S. L.
Cited in: 1 Publication (2018)
Related Software: Python; NumPy; Gromacs; OpenMM; HOOMD-blue; SciPy; …
Main Fields: Fluid mechanics (76-XX)

MultiScaleOT

Software Authors:   Bernhard Schmitzer
Cited in: 9 Publications (2016–2021)
Related Software: EMD; Scikit; NumPy; Cython; CuPy; Pymanopt; …
Main Fields: Calculus of variations and optimal control; optimization (49-XX); Numerical analysis (65-XX); Computer science (68-XX)

Nutils

Software Authors:   Evalf Computing; G. van Zwieten, C. Verhoosel, J. van Zwieten, T. van Opstal, W. Hoitinga
Cited in: 9 Publications (2018–2022)
Related Software: FEniCS; Ipopt; ParaView; pfm-cracks; HPX; NLMech; …
Main Fields: Partial differential equations (35-XX); Numerical analysis (65-XX); Computer science (68-XX)

Garamon

Software Authors:   Breuils, Stéphane; Nozick, Vincent; Fuchs, Laurent
Cited in: 8 Publications (2019–2022)
Related Software: Clifford Multivector Toolbox; ganja.js; Gaigen; GitHub; CLIFFORD; BIGEBRA; …
Main Fields: Number theory (11-XX); Algebraic geometry (14-XX); Linear and multilinear algebra; matrix theory (15-XX)

Ginv

Software Authors:   Blinkov, Yu.A.; Gerdt, V.P.
Cited in: 8 Publications (2006–2014)
Related Software: Janet; Maple; AlgebraicThomas; DIFFALG; DifferentialThomas; RegularChains; …
Main Fields: Commutative algebra (13-XX); Associative rings and algebras (16-XX); Partial differential equations (35-XX)

HTSeq

Software Authors:   Simon Anders, Paul Theodor Pyl, Wolfgang Huber
Cited in: 7 Publications (2016–2018)
Related Software: Bioconductor; edgeR; TopHat; STAR; R; DEseq; …
Main Fields: Statistics (62-XX); Biology and other natural sciences (92-XX)

OpenTURNS

Software Authors:   G. Andrianov, S. Burriel, S. Cambier, A. Dutfoy, I. Dutka-Malen, E. de Rocquigny, B. Sudret, P. Benjamin, R. Lebrun, F. Mangeant, M. Pendola
Cited in: 6 Publications (2013–2021)
Related Software: BATMAN; Python; UQLab; PiXIE; PyCharm; MASCARET; …
Main Fields: Partial differential equations (35-XX); Calculus of variations and optimal control; optimization (49-XX); Statistics (62-XX)

pyunicorn

Software Authors:   Jonathan F. Donges, Jobst Heitzig, Boyan Beronov, Marc Wiedermann, Jakob Runge, Qing Yi Feng, Liubov Tupikina, Veronika Stolbova, Reik V. Donner, Norbert Marwan, Henk A. Dijkstra, J. Kurths
Cited in: 6 Publications (2015–2021)
Related Software: SciPy; TISEAN; igraph; Python; NetworkX; NumPy; …
Main Fields: Combinatorics (05-XX); Dynamical systems and ergodic theory (37-XX); Statistics (62-XX)

RSpectra

Software Authors:   Yixuan Qiu; Jiali Mei; et. al.
Cited in: 3 Publications (2020–2022)
Related Software: R; ggplot2; Rcpp; idm; onlinePCA; irlba; …
Main Fields: Statistics (62-XX)

scikit-optimize

Software Authors:   Head, T. et al.
Cited in: 6 Publications (2020–2023)
Related Software: Python; Scikit; TensorFlow; Spearmint; PyMC; SciPy; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Computer science (68-XX)

sktime

Software Authors:   Markus Löning, Anthony Bagnall, Sajaysurya Ganesh, Viktor Kazakov, Jason Lines, Franz J. Király
Cited in: 4 Publications (2020–2021)
Related Software: tslearn; Python; GitHub; pyts; Seglearn; TensorFlow; …
Main Fields: Statistics (62-XX); Computer science (68-XX)

SymEngine

Software Authors:   Ondřej Čertík
Cited in: 7 Publications (2019–2023)
Related Software: ADOL-C; Intel TBB; Trilinos; PETSc; deal.ii; UMFPACK; …
Main Fields: General and overarching topics; collections (00-XX); Convex and discrete geometry (52-XX); Numerical analysis (65-XX)

tslearn

Software Authors:   Tavenard, Romain; Faouzi, Johann; Vandewiele, Gilles; Divo, Felix; Androz, Guillaume; Holtz, Chester; Payne, Marie; Yurchak, Roman; Rußwurm, Marc; Kolar, Kushal; Woods, Eli
Cited in: 4 Publications (2020–2021)
Related Software: sktime; GitHub; Python; Seglearn; pyts; cesium; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Computer science (68-XX)

BayesOpt

Software Authors:   Martinez-Cantin, Ruben
Cited in: 6 Publications (2014–2021)
Related Software: NLopt; Agros2D; Spearmint; libcmaes; Eigen; GPy; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Computer science (68-XX)

BS Seeker

Software Authors:   Chen, P. Y., S. J. Cokus, M. Pellegrini
Cited in: 6 Publications (2012–2022)
Related Software: BSMAP; Bismark; BSmooth; Bowtie 2; SHRiMP; MethylCoder; …
Main Fields: General and overarching topics; collections (00-XX); Probability theory and stochastic processes (60-XX); Computer science (68-XX)

cosmoabc

Software Authors:   E. E. O. Ishida, S. D. P. Vitenti, M. Penna-Lima, J. Cisewski, R. S. de Souza, A. M. M. Trindade, E. Cameron, V. C. Busti, for the COIN collaboration
Cited in: 5 Publications (2017–2022)
Related Software: astroABC; abc; SciPy; emcee; Python; NumCosmo; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Numerical analysis (65-XX)

dnner

Software Authors:   Marylou Gabrié, Andre Manoel, Clément Luneau, Jean Barbier, Nicolas Macris, Florent Krzakala, Lenka Zdeborová
Cited in: 7 Publications (2019–2021)
Related Software: lsd; TheCommitteeMachine; AlexNet; GNMT; ImageNet; Adam; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Computer science (68-XX)

fpylll

Software Authors:   The FPyLLL Development Team
Cited in: 7 Publications (2018–2022)
Related Software: fpLLL; GitHub; SageMath; G6K; BKZ; SeaSign; …
Main Fields: Number theory (11-XX); Algebraic geometry (14-XX); Quantum theory (81-XX)

LALSuite

Software Authors:   Mercer R A et al.
Cited in: 2 Publications (2022)
Related Software: Python; PyCBC; emcee; NumPy; SciPy; FINDCHIRP; …
Main Fields: Algebraic geometry (14-XX); Statistics (62-XX); Quantum theory (81-XX)

lsd

Software Authors:   Marylou Gabrié, Andre Manoel, Clément Luneau, Jean Barbier, Nicolas Macris, Florent Krzakala, Lenka Zdeborová
Cited in: 7 Publications (2019–2021)
Related Software: dnner; TheCommitteeMachine; AlexNet; GNMT; ImageNet; Adam; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Computer science (68-XX)

LWPR

Software Authors:   Klanke, Stefan; Vijayakumar, Sethu; Schaal, Stefan
Cited in: 5 Publications (2008–2013)
Related Software: Forgetron; LINPACK; Qhull; C4.5; LIBLINEAR; UCI-ml; …
Main Fields: Statistics (62-XX); Computer science (68-XX); Mechanics of particles and systems (70-XX)

minepy

Software Authors:   Albanese, D., Filosi, M., Visintainer, R.
Cited in: 4 Publications (2016–2020)
Related Software: minerva; R; Hmisc; Matlab; Python; PhysioToolkit; …
Main Fields: Statistics (62-XX); Operations research, mathematical programming (90-XX)

OpenSBLI

Software Authors:   C. T. Jacobs, S. P. Jammy, N. D. Sandham
Cited in: 7 Publications (2018–2022)
Related Software: Halide; SENGA2; ParFUM; Cantera; GRI-Mech 3.0; Pyramid; …
Main Fields: Partial differential equations (35-XX); Numerical analysis (65-XX); Mechanics of deformable solids (74-XX)

Pillow

Software Authors:   Fredrik Lundh, Alex Clark and Contributors
Cited in: 2 Publications (2018–2021)
Related Software: NumPy; Python; Matplotlib; SciPy; pandas; Scikit; …
Main Fields: Measure and integration (28-XX); Dynamical systems and ergodic theory (37-XX); Probability theory and stochastic processes (60-XX)

Pyro

Software Authors:   Blank, D.S., Kumar, D., Meeden, L., Yanco, H
Cited in: 2 Publications (2005–2009)
Related Software: CARMEN; ROS; Orocos; Radish
Main Fields: Computer science (68-XX); Systems theory; control (93-XX)

PyTables

Software Authors:   Alted F, Vilata I, et al.
Cited in: 3 Publications (2012–2019)
Related Software: NumPy; Python; SciPy; HDF5; Matplotlib; Scikit; …
Main Fields: Partial differential equations (35-XX); Dynamical systems and ergodic theory (37-XX); Numerical analysis (65-XX)