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Found 1,049 Software Packages (Results 1–100)

Scikit

Software Authors:   Pedregosa, Fabian; Varoquaux, Gaël; Gramfort, Alexandre; Michel, Vincent; Thirion, Bertrand; Grisel, Olivier; Blondel, Mathieu; Prettenhofer, Peter; Weiss, Ron; Dubourg, Vincent; Vanderplas, Jake; Passos, Alexandre; Cournapeau, David; Brucher, Matthieu; Perrot, Matthieu; Duchesnay, Édouard
Referenced in: 475 Publications (2011–2023)
Related Software: Python; SciPy; NumPy; TensorFlow; UCI-ml; GitHub; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Computer science (68-XX)

NumPy

Software Authors:   Oliphant, T. E.
Referenced in: 279 Publications (2000–2022)
Related Software: Python; SciPy; Matplotlib; Scikit; pandas; TensorFlow; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Computer science (68-XX)

PyTorch

Software Authors:   A. Paszke, S. Gross, F. Massa, A. Lerer, J. Bradbury, G. Chanan, T. Killeen, Z. Lin, N. Gimelshein, L. Antiga, A. Desmaison, A. Kopf, E. Yang, Z. DeVito, M. Raison, A. Tejani, S. Chilamkurthy, B. Steiner, L. Fang, J. Bai, S. Chintala
Referenced in: 325 Publications (2018–2023)
Related Software: TensorFlow; Adam; Python; ImageNet; GitHub; Scikit; …
Main Fields: Partial differential equations (35-XX); Statistics (62-XX); Numerical analysis (65-XX)

igraph

Software Authors:   Gábor Csárdi, Tamás Nepusz, Szabolcs Horvát, Vincent Traag, Fabio Zanini
Referenced in: 149 Publications (2010–2023)
Related Software: R; Python; ggplot2; NetworkX; Rcpp; glasso; …
Main Fields: Combinatorics (05-XX); Statistics (62-XX); Computer science (68-XX)

NetworkX

Software Authors:   Aric Hagberg, Dan Schult, Pieter Swart
Referenced in: 137 Publications (2008–2023)
Related Software: Python; SciPy; NumPy; Matplotlib; igraph; SNAP; …
Main Fields: Combinatorics (05-XX); Computer science (68-XX); Operations research, mathematical programming (90-XX)

Pyomo

Software Authors:   Hart, William E.; Laird, Carl; Watson, Jean-Paul; Woodruff, David L.
Referenced in: 76 Publications (2012–2022)
Related Software: Gurobi; Ipopt; Python; CPLEX; GAMS; PySP; …
Main Fields: Numerical analysis (65-XX); Computer science (68-XX); Operations research, mathematical programming (90-XX)

knitr

Software Authors:   Yihui Xie et. al.
Referenced in: 39 Publications (2012–2022)
Related Software: R; ggplot2; shiny; rmarkdown; Rcpp; Sweave; …
Main Fields: General and overarching topics; collections (00-XX); Statistics (62-XX); Numerical analysis (65-XX)

CasADi

Software Authors:   Andersson, Joel; Åkesson, Johan; Diehl, Moritz
Referenced in: 66 Publications (2012–2022)
Related Software: Ipopt; ACADO; Matlab; qpOASES; SUNDIALS; ADOL-C; …
Main Fields: Calculus of variations and optimal control; optimization (49-XX); Numerical analysis (65-XX); Operations research, mathematical programming (90-XX)

CVXOPT

Software Authors:   Martin Andersen; Joachim Dahl; Lieven Vandenberghe
Referenced in: 61 Publications (2008–2022)
Related Software: SeDuMi; Python; YALMIP; CVX; Mosek; SciPy; …
Main Fields: Calculus of variations and optimal control; optimization (49-XX); Statistics (62-XX); Numerical analysis (65-XX)

Astropy

Software Authors:   T.P. Robitaille, E.J. Tollerud, et. al.
Referenced in: 3 Publications (2018–2021)
Related Software: Python; NumPy; Matplotlib; SciPy; Scikit; pandas; …
Main Fields: Statistics (62-XX); Optics, electromagnetic theory (78-XX); Quantum theory (81-XX)

Regina

Software Authors:   B.A. Burton, R. Budney, W. Pettersson, et al.
Referenced in: 46 Publications (2004–2022)
Related Software: SnapPy; SnapPea; GitHub; SageMath; Normaliz; simpcomp; …
Main Fields: Combinatorics (05-XX); Algebraic geometry (14-XX); Convex and discrete geometry (52-XX)

petsc4py

Software Authors:   L. Dalcin, P. Kler, R. Paz, A. Cosimo
Referenced in: 43 Publications (2015–2022)
Related Software: mpi4py; PETSc; Firedrake; FEniCS; Python; UFL; …
Main Fields: Partial differential equations (35-XX); Calculus of variations and optimal control; optimization (49-XX); Numerical analysis (65-XX)

LowRankModels

Software Authors:   Udell, Madeleine; Horn, Corinne; Zadeh, Reza; Boyd, Stephen
Referenced in: 41 Publications (2016–2022)
Related Software: Pyglrm; softImpute; R; PMA; LBFGS-B; Adam; …
Main Fields: Linear and multilinear algebra; matrix theory (15-XX); Statistics (62-XX); Numerical analysis (65-XX)

Pyglrm

Software Authors:   Udell, Madeleine; Horn, Corinne; Zadeh, Reza; Boyd, Stephen
Referenced in: 40 Publications (2016–2022)
Related Software: LowRankModels; softImpute; R; LBFGS-B; PMA; OptShrink; …
Main Fields: Linear and multilinear algebra; matrix theory (15-XX); Statistics (62-XX); Numerical analysis (65-XX)

F2PY

Software Authors:   Pearu Peterson
Referenced in: 26 Publications (2000–2021)
Related Software: Python; SciPy; NumPy; ODEPACK; SWIG; FFTW; …
Main Fields: Partial differential equations (35-XX); Numerical analysis (65-XX); Mechanics of deformable solids (74-XX)

py-junctions

Software Authors:   A. Grassi, J. Halverson J. Shaneson
Referenced in: 30 Publications (2013–2018)
Related Software: SINGULAR; SageMath; Smooth; STRINGVACUA; PRMLT; BraidedJunctions; …
Main Fields: Algebraic geometry (14-XX); Differential geometry (53-XX); Statistics (62-XX)

Statsmodels

Software Authors:   Josef Perktold, Skipper Seabold, Jonathan Taylor, statsmodels-developers
Referenced in: 14 Publications (2016–2022)
Related Software: Python; Scikit; SciPy; NumPy; Matplotlib; R; …
Main Fields: General and overarching topics; collections (00-XX); Statistics (62-XX); Computer science (68-XX)

propy

Software Authors:   Cao, Dong - Sheng, Qing - Song Xu, Yi - Zeng Liang
Referenced in: 26 Publications (2013–2019)
Related Software: iRSpot-PseDNC; PseAAC-Builder; iSNO-PseAAC; PseAAC; Pse-in-One; iRSpot-TNCPseAAC; …
Main Fields: Statistics (62-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)

PyPI

Software Authors:   Python Software Foundation
Referenced in: 4 Publications (2018–2022)
Related Software: Python; NumPy; SciPy; Matplotlib; GitHub; Scikit; …
Main Fields: Statistics (62-XX); Computer science (68-XX); Operations research, mathematical programming (90-XX)

ForwardDiff

Software Authors:   Jarrett Revels, Miles Lubin, Theodore Papamarkou
Referenced in: 20 Publications (2017–2022)
Related Software: Julia; TensorFlow; PyTorch; Ipopt; JuMP; Stan; …
Main Fields: Partial differential equations (35-XX); Dynamical systems and ergodic theory (37-XX); Numerical analysis (65-XX)

PySP

Software Authors:   Watson, Jean-Paul; Woodruff, David L.; Hart, William E.
Referenced in: 23 Publications (2012–2022)
Related Software: Pyomo; CPLEX; Gurobi; DSP; AIMMS; AMPL; …
Main Fields: Calculus of variations and optimal control; optimization (49-XX); Convex and discrete geometry (52-XX); Numerical analysis (65-XX)

GetDist

Software Authors:   Lewis, Anthony
Referenced in: 21 Publications (2018–2021)
Related Software: CAMB; CLASS; SciPy; emcee; NumPy; Matplotlib; …
Main Fields: Partial differential equations (35-XX); Fluid mechanics (76-XX); Optics, electromagnetic theory (78-XX)

SciTools

Software Authors:   H. P. Langtangen, J. H. Ring
Referenced in: 19 Publications (2004–2020)
Related Software: Python; NumPy; Matplotlib; SciPy; Matlab; SymPy; …
Main Fields: Partial differential equations (35-XX); Numerical analysis (65-XX); Computer science (68-XX)

Pyclaw

Software Authors:   Ketcheson, David I.; Mandli, Kyle; Ahmadia, Aron J.; Alghamdi, Amal; De Luna, Manuel Quezada; Parsani, Matteo; Knepley, Matthew G.; Emmett, Matthew
Referenced in: 19 Publications (2012–2022)
Related Software: PyWENO; CLAWPACK; SharpClaw; PETSc; NumPy; Python; …
Main Fields: Partial differential equations (35-XX); Numerical analysis (65-XX); Mechanics of deformable solids (74-XX)

xarray

Software Authors:   S Hoyer
Referenced in: 2 Publications (2020–2021)
Related Software: Python; NumPy; Matplotlib; Dask; SciPy; NetCDF; …
Main Fields: Mathematical logic and foundations (03-XX); Computer science (68-XX)

ASE

Software Authors:   Hjorth Larsen, A.; Jørgen Mortensen, J.; Blomqvist, J.; Castelli, I. E.; Christensen, R.; Dułak, M.; Friis, J.; Groves, M. N.; Hammer, B.; Hargus, C.; Hermes, E. D.; Jennings, P. C.; Bjerre Jensen, P.; Kermode, J.; Kitchin, J. R.; Leonhard Kolsbjerg, E.; 14 Kubal, J.; Kaasbjerg, K.; Lysgaard, S.; Bergmann Maronsson, J.; Maxson, T.; Olsen, T.; Pastewka, L.; Peterson, A.; Rostgaard, C.; Schiøtz, J.; Schütt, O.; Strange, M.; Thygesen, K.; Vegge, T.; Vilhelmsen, L.; Walter, M.; Zeng, Z.; Jacobsen, K. W
Referenced in: 3 Publications (2019–2022)
Related Software: Python; pymatgen; NumPy; SciPy; Spglib; Atomate; …
Main Fields: Probability theory and stochastic processes (60-XX); Mechanics of deformable solids (74-XX); Fluid mechanics (76-XX)

SciANN

Software Authors:   Haghighat, Ehsan; Juanes, Ruben
Referenced in: 17 Publications (2021–2022)
Related Software: TensorFlow; DeepXDE; Adam; DiffSharp; SimNet; SciPy; …
Main Fields: Partial differential equations (35-XX); Numerical analysis (65-XX); Computer science (68-XX)

BIOGEME

Software Authors:   Bierlaire, Michel
Referenced in: 15 Publications (2006–2021)
Related Software: DONLP2; CFSQP; micEcon; pandas; zioprobit; gidm; …
Main Fields: Statistics (62-XX); Operations research, mathematical programming (90-XX); Game theory, economics, finance, and other social and behavioral sciences (91-XX)

PyTransport

Software Authors:   David J. Mulryne, John W. Ronayne
Referenced in: 15 Publications (2017–2021)
Related Software: CppTransport; BINGO; Python; MultiModeCode; CandS
Main Fields: Measure and integration (28-XX); Geometry (51-XX); Differential geometry (53-XX)

GiNaC-cycle

Software Authors:   Vladimir V. Kisil
Referenced in: 14 Publications (2004–2022)
Related Software: GiNaC; MetaPost; Asymptote; Noweb; Python; Kig; …
Main Fields: Linear and multilinear algebra; matrix theory (15-XX); Functions of a complex variable (30-XX); Geometry (51-XX)

Holes

Software Authors:   G. Petri
Referenced in: 13 Publications (2014–2021)
Related Software: CliqueTop; Gudhi; javaPlex; KONECT; NetworkX; jHoles; …
Main Fields: Combinatorics (05-XX); Dynamical systems and ergodic theory (37-XX); Algebraic topology (55-XX)

reticulate

Software Authors:   Kevin Ushey, JJ Allaire, Yuan Tang, Dirk Eddelbuettel, Bryan Lewis, Marcus Geelnard
Referenced in: 5 Publications (2017–2022)
Related Software: R; Python; Rcpp; microbenchmark; SymPy; Yacas; …
Main Fields: General and overarching topics; collections (00-XX); Statistics (62-XX); Numerical analysis (65-XX)

Sailfish

Software Authors:   Januszewski, M.; Kostur, M.
Referenced in: 11 Publications (2014–2021)
Related Software: CUDA; Palabos; LUDWIG; LBfoam; LBsoft; LB3D; …
Main Fields: Numerical analysis (65-XX); Fluid mechanics (76-XX); Classical thermodynamics, heat transfer (80-XX)

PyCox

Software Authors:   Geck, Meinolf
Referenced in: 11 Publications (2012–2020)
Related Software: CHEVIE; GAP; SageMath; Coxeter; Python
Main Fields: Combinatorics (05-XX); Associative rings and algebras (16-XX); Nonassociative rings and algebras (17-XX)

PySCF

Software Authors:   Qiming Sun, Timothy C. Berkelbach, Nick S. Blunt, George H. Booth, Sheng Guo, Zhendong Li, Junzi Liu, James McClain, Sandeep Sharma, Sebastian Wouters, Garnet Kin-Lic Chan
Referenced in: 4 Publications (2019–2022)
Related Software: SciPy; Python; Psi4; OpenFermion; qHiPSTER; ProjectQ; …
Main Fields: Numerical analysis (65-XX); Computer science (68-XX); Quantum theory (81-XX)

repDNA

Software Authors:   Bin Liu, Fule Liu, Longyun Fang, Xiaolong Wang, Kuo-Chen Chou
Referenced in: 12 Publications (2015–2019)
Related Software: Pse-in-One; iRSpot-PseDNC; iNuc-PseKNC; PseKNC; PseKNC-General; iAMP-2L; …
Main Fields: Statistics (62-XX); Biology and other natural sciences (92-XX)

Wilson

Software Authors:   Jason Aebischer, Jacky Kumar, David M. Straub
Referenced in: 5 Publications (2018–2022)
Related Software: DsixTools; flavio; CoDEx; MatchingTools; SMEFTsim; SmeftFR; …
Main Fields: Quantum theory (81-XX); Relativity and gravitational theory (83-XX)

FIAT

Software Authors:   Marie E. Rognes, Anders Logg, David A. Ham, Miklós Homolya, Nico Schlömer, Jan Blechta, Andrew T. T. McRae, Aslak Bergersen, Colin J. Cotter, Johannes Ring, Lawrence Mitchell
Referenced in: 10 Publications (2016–2022)
Related Software: PETSc; Firedrake; petsc4py; FEniCS; COFFEE; TSFC; …
Main Fields: Partial differential equations (35-XX); Numerical analysis (65-XX); Computer science (68-XX)

geomstats

Software Authors:   Nina Miolane, Johan Mathe, Claire Donnat, Mikael Jorda, Xavier Pennec
Referenced in: 9 Publications (2019–2022)
Related Software: Pymanopt; Geoopt; McTorch; TensorFlow; PyGeometry; Python; …
Main Fields: Differential geometry (53-XX); Global analysis, analysis on manifolds (58-XX); Statistics (62-XX)

Hom4PS-3

Software Authors:   Chen, Tianran; Lee, Tsung-Lin; Li, Tien-Yien
Referenced in: 11 Publications (2014–2021)
Related Software: PHCpack; HOM4PS; MixedVol; DEMiCs; Bertini; PHoM; …
Main Fields: Commutative algebra (13-XX); Algebraic geometry (14-XX); Convex and discrete geometry (52-XX)

LibROSA

Software Authors:   McFee, Brian, Colin Raffel, Dawen Liang, Daniel PW Ellis, Matt McVicar, Eric Battenberg, Oriol Nieto
Referenced in: 0 Publications
Related Software: Python; PyTorch; LibriSpeech; NumPy; TensorFlow; Matlab; …
Main Fields:

nbodykit

Software Authors:   Nick Hand, Yu Feng, Florian Beutler, Yin Li, Chirag Modi, Uros Seljak, Zachary Slepian
Referenced in: 10 Publications (2019–2021)
Related Software: CLASS; Healpix; DTFE; GitHub; ECOSMOG; HaloGen; …
Main Fields: Mechanics of particles and systems (70-XX); Optics, electromagnetic theory (78-XX); Quantum theory (81-XX)

Powerlaw

Software Authors:   Jeff Alstott, Ed Bullmore, Dietmar Plenz
Referenced in: 8 Publications (2015–2021)
Related Software: plfit; Python; hosking.c; colorednoise.py; SciPy; pyunicorn; …
Main Fields: Ordinary differential equations (34-XX); Statistics (62-XX); Computer science (68-XX)

viridis

Software Authors:   Simon Garnier, Noam Ross, Bob Rudis
Referenced in: 4 Publications (2020–2022)
Related Software: R; ggplot2; dplyr; shiny; GitHub; survival; …
Main Fields: Dynamical systems and ergodic theory (37-XX); Statistics (62-XX); Numerical analysis (65-XX)

cccp

Software Authors:   Pfaff, Bernhard
Referenced in: 9 Publications (2013–2021)
Related Software: rneos; gogarch; urca; R; vars; FRAPO; …
Main Fields: Statistics (62-XX); Game theory, economics, finance, and other social and behavioral sciences (91-XX)

fastcluster

Software Authors:   Müllner, D.
Referenced in: 6 Publications (2015–2022)
Related Software: R; UCI-ml; Python; mclust; Matlab; LIBSVM; …
Main Fields: Algebraic topology (55-XX); Statistics (62-XX); Computer science (68-XX)

flavio

Software Authors:   D.M. Straub, et al.
Referenced in: 5 Publications (2019–2022)
Related Software: Wilson; FormFlavor; DsixTools; FeynRules; Python; SMEFTsim; …
Main Fields: Statistics (62-XX); Quantum theory (81-XX); Relativity and gravitational theory (83-XX)

Mathchem

Software Authors:   A. Vasilyev, D. Stevanović
Referenced in: 10 Publications (2015–2022)
Related Software: BlueJ; Graph6Java; GraphTheory; plantri; Colt; House of Graphs; …
Main Fields: Combinatorics (05-XX); Biology and other natural sciences (92-XX)

Zeta

Software Authors:   Rossmann, Tobias
Referenced in: 10 Publications (2015–2022)
Related Software: SageMath; LattE; Normaliz; SINGULAR; CharacteristicClasses; Guarana; …
Main Fields: Combinatorics (05-XX); Number theory (11-XX); Algebraic geometry (14-XX)

APFEL

Software Authors:   Bertone, Valerio; Carrazza, Stefano; Rojo, Juan
Referenced in: 7 Publications (2014–2020)
Related Software: QCDNUM16; LHAPDF; QCD-PEGASUS; APFEL++; HOPPET; MadGraph5_aMC@NLO; …
Main Fields: Quantum theory (81-XX)

dynesty

Software Authors:   Joshua S Speagle
Referenced in: 1 Publication (2021)
Related Software: Python; MultiNest; emcee; SciPy; Astropy; polychord; …
Main Fields: Mechanics of particles and systems (70-XX); Quantum theory (81-XX); Relativity and gravitational theory (83-XX)

h5py

Software Authors:   A. Colette
Referenced in: 1 Publication (2010)
Related Software: Python; NumPy; HDF5; SciPy; Matplotlib; Astropy; …
Main Fields: Dynamical systems and ergodic theory (37-XX); Statistical mechanics, structure of matter (82-XX)

healpy

Software Authors:   Cyrille Rosset; Andrea Zonca; Martin Reinecke; Leo Singer; Daniel Lenz
Referenced in: 6 Publications (2019–2021)
Related Software: Healpix; Python; NumPy; SciPy; Astropy; Matplotlib; …
Main Fields: Statistics (62-XX); Optics, electromagnetic theory (78-XX); Quantum theory (81-XX)

InterpretML

Software Authors:   Harsha Nori, Samuel Jenkins, Paul Koch, Rich Caruana
Referenced in: 2 Publications (2020–2021)
Related Software: AI Explainability 360; modelStudio; H2O; DALEX; Python; shap; …
Main Fields: Computer science (68-XX)

MDAnalysis

Software Authors:   Gowers, R. J.; Linke, M.; Barnoud, J.; Reddy, T. J.E.; Melo, M. N.; Seyler, S. L.
Referenced in: 1 Publication (2018)
Related Software: Python; NumPy; Gromacs; OpenMM; HOOMD-blue; SciPy; …
Main Fields: Fluid mechanics (76-XX)

NumberJack

Software Authors:   Barry O'Sullivan; Eoin O'Mahony; Emmanuel Hebrard
Referenced in: 7 Publications (2013–2018)
Related Software: MiniZinc; ToulBar2; SUNNY; SATzilla; Essence; Gecode; …
Main Fields: Computer science (68-XX); Operations research, mathematical programming (90-XX)

PyWavelets

Software Authors:   Lee, G. R.; Gommers, R.; Waselewski, F.; Wohlfahrt, K.; O’Leary, A.
Referenced in: 6 Publications (2019–2021)
Related Software: Python; GitHub; SciPy; Scikit; ODL; Adam; …
Main Fields: Numerical analysis (65-XX); Computer science (68-XX); Fluid mechanics (76-XX)

Ripser.py

Software Authors:   Christopher Tralie, Nathaniel Saul, Rann Bar-On
Referenced in: 7 Publications (2019–2022)
Related Software: Scikit; Ripser; PersistenceImages; GitHub; SciPy; Python; …
Main Fields: Dynamical systems and ergodic theory (37-XX); Algebraic topology (55-XX); Statistics (62-XX)

SMEFTsim

Software Authors:   Ilaria Brivio, Yun Jiang, Michael Trott
Referenced in: 3 Publications (2018–2021)
Related Software: DsixTools; FeynRules; Wilson; SmeftFR; MatchingTools; flavio; …
Main Fields: Quantum theory (81-XX); Relativity and gravitational theory (83-XX)

StochPy

Software Authors:   Maarleveld, T. R.; Olivier, B. G.; Bruggeman, F. J.
Referenced in: 8 Publications (2017–2022)
Related Software: COPASI; BioNetGen; StochKit2; JuMP; libSBML; DifferentialEquations.jl; …
Main Fields: Ordinary differential equations (34-XX); Approximations and expansions (41-XX); Probability theory and stochastic processes (60-XX)

tsfresh

Software Authors:   Maximilian Christ, Nils Braun, Julius Neuffer, Andreas W. Kempa-Liehr
Referenced in: 4 Publications (2019–2022)
Related Software: Python; hctsa; cesium; SciPy; NumPy; TSFEL; …
Main Fields: Statistics (62-XX); Computer science (68-XX); Operations research, mathematical programming (90-XX)

ABC-SysBio

Software Authors:   Liepe, J., Barnes, C., Cule, E., Erguler, K., Kirk, P., Toni, T., Stumpf, M. P. H.
Referenced in: 6 Publications (2012–2022)
Related Software: BioBayes; astroABC; EasyABC; SciPy; Python; BCM; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Numerical analysis (65-XX)

DFO-GN

Software Authors:   C. Cartis; L. Roberts
Referenced in: 7 Publications (2019–2022)
Related Software: BOBYQA; UOBYQA; ORBIT; Boosters; TAO; CUTEst; …
Main Fields: Calculus of variations and optimal control; optimization (49-XX); Numerical analysis (65-XX); Computer science (68-XX)

Faddeeva

Software Authors:   Johnson, S. G.
Referenced in: 6 Publications (2016–2021)
Related Software: Matlab; Algorithm 916; DLMF; Algorithm 680; GENSPECT; HEDSATS; …
Main Fields: Functions of a complex variable (30-XX); Special functions (33-XX); Numerical analysis (65-XX)

HTSeq

Software Authors:   Simon Anders, Paul Theodor Pyl, Wolfgang Huber
Referenced in: 7 Publications (2016–2018)
Related Software: Bioconductor; edgeR; TopHat; STAR; R; DEseq; …
Main Fields: Statistics (62-XX); Biology and other natural sciences (92-XX)

Kwant

Software Authors:   Christoph W Groth, Michael Wimmer, Anton R Akhmerov, Xavier Waintal
Referenced in: 2 Publications (2019–2021)
Related Software: Python; SMEAGOL; NumPy; SciPy; LAPACK; TBTK; …
Main Fields: Partial differential equations (35-XX); Statistical mechanics, structure of matter (82-XX)

pyunicorn

Software Authors:   Jonathan F. Donges, Jobst Heitzig, Boyan Beronov, Marc Wiedermann, Jakob Runge, Qing Yi Feng, Liubov Tupikina, Veronika Stolbova, Reik V. Donner, Norbert Marwan, Henk A. Dijkstra, J. Kurths
Referenced in: 6 Publications (2015–2021)
Related Software: SciPy; TISEAN; igraph; Python; NetworkX; NumPy; …
Main Fields: Combinatorics (05-XX); Dynamical systems and ergodic theory (37-XX); Statistics (62-XX)

QCQP

Software Authors:   J. Park; S. Boyd
Referenced in: 8 Publications (2019–2022)
Related Software: Ipopt; Gurobi; CVX; OPTI; CERR; TROTS; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Quantum theory (81-XX)

rpy2

Software Authors:   Alexander Belopolsky, Brad Chapman, Peter Cock, Dirk Eddelbuettel, Thomas Kluyver, Walter Moreira, Laurent Oget, John Owens, Nicolas Rapin, Grzegorz Slodkowicz, Nathaniel Smith, Gregory Warnes
Referenced in: 1 Publication (2016)
Related Software: R; Python; NumPy; Lmertest; Matplotlib; lme4; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Computer science (68-XX)

RSpectra

Software Authors:   Yixuan Qiu; Jiali Mei; et. al.
Referenced in: 3 Publications (2020–2022)
Related Software: R; ggplot2; Rcpp; idm; onlinePCA; irlba; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX)

Shapely

Software Authors:   Gillies, S
Referenced in: 0 Publications
Related Software: Python; NumPy; GeoPandas; pandas; Scikit; OSMnx; …
Main Fields:

tslearn

Software Authors:   Tavenard, Romain; Faouzi, Johann; Vandewiele, Gilles; Divo, Felix; Androz, Guillaume; Holtz, Chester; Payne, Marie; Yurchak, Roman; Rußwurm, Marc; Kolar, Kushal; Woods, Eli
Referenced in: 4 Publications (2020–2021)
Related Software: sktime; GitHub; Python; Seglearn; pyts; cesium; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Computer science (68-XX)

brew

Software Authors:   Jeffrey Horner
Referenced in: 2 Publications (2014–2017)
Related Software: R; knitr; CRAN Task Views; xtable; ggplot2; data.table; …
Main Fields: Statistics (62-XX); Computer science (68-XX)

dnner

Software Authors:   Marylou Gabrié, Andre Manoel, Clément Luneau, Jean Barbier, Nicolas Macris, Florent Krzakala, Lenka Zdeborová
Referenced in: 7 Publications (2019–2021)
Related Software: lsd; TheCommitteeMachine; AlexNet; GNMT; ImageNet; Adam; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Computer science (68-XX)

IB2d

Software Authors:   Nicholas A. Battista, W. Christopher Strickland, Laura A. Miller
Referenced in: 6 Publications (2018–2022)
Related Software: VisIt; Matlab; Python; COMSOL; ParaView; IBAMR; …
Main Fields: Numerical analysis (65-XX); Mechanics of deformable solids (74-XX); Fluid mechanics (76-XX)

lsd

Software Authors:   Marylou Gabrié, Andre Manoel, Clément Luneau, Jean Barbier, Nicolas Macris, Florent Krzakala, Lenka Zdeborová
Referenced in: 7 Publications (2019–2021)
Related Software: dnner; TheCommitteeMachine; AlexNet; GNMT; ImageNet; Adam; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Computer science (68-XX)

MSPPy

Software Authors:   Ding L, Ahmed S, Shapiro A
Referenced in: 6 Publications (2020–2022)
Related Software: SDDP; JuMP; StOpt; StochDynamicProgramming.jl; StructDualDynProg.jl; Python; …
Main Fields: Operations research, mathematical programming (90-XX)

OSMnx

Software Authors:   G. Boeing
Referenced in: 0 Publications
Related Software: Python; NumPy; NetworkX; OpenStreetMap; GeoPandas; Shapely; …
Main Fields:

PaCAL

Software Authors:   Korzen, Marcin; Szymon Jaroszewicz
Referenced in: 6 Publications (2012–2017)
Related Software: Chebfun; APPL; Matlab; Mathematica; SAS/QC; PyMC; …
Main Fields: Mathematical logic and foundations (03-XX); Special functions (33-XX); Probability theory and stochastic processes (60-XX)

PyOD

Software Authors:   Yue Zhao, Zain Nasrullah, Zheng Li
Referenced in: 1 Publication (2022)
Related Software: Python; Scikit; PyTorch; TODS; NumPy; PyNomaly; …
Main Fields: Mathematical logic and foundations (03-XX); Measure and integration (28-XX); Computer science (68-XX)

PyTables

Software Authors:   Alted F, Vilata I, et al.
Referenced in: 3 Publications (2012–2019)
Related Software: NumPy; SciPy; Python; HDF5; Matplotlib; Scikit; …
Main Fields: Partial differential equations (35-XX); Dynamical systems and ergodic theory (37-XX); Numerical analysis (65-XX)

PyVista

Software Authors:   C. Bane Sullivan; Alexander A. Kaszynski
Referenced in: 0 Publications
Related Software: Python; Matplotlib; VTK; scikit-image; SciPy; Gmsh; …
Main Fields:

Tkinter

Software Authors:   –
Referenced in: 3 Publications (2011–2019)
Related Software: Python; NumPy; SciPy; Matplotlib; PlenoptiCam; PlenoptiSign; …
Main Fields: General and overarching topics; collections (00-XX); Numerical analysis (65-XX); Computer science (68-XX)

yt

Software Authors:   Matthew J. Turk, Britton D. Smith, Jeffrey S. Oishi, Stephen Skory, Samuel W. Skillman, Tom Abel, Michael L. Norman
Referenced in: 3 Publications (2016–2017)
Related Software: NumPy; Python; Matplotlib; h5py; unyt; SciPy; …
Main Fields: Partial differential equations (35-XX); Numerical analysis (65-XX); Fluid mechanics (76-XX)

ArviZ

Software Authors:   Kumar, R.; Colin, C.; Hartikainen, A.; Martin, O. A.
Referenced in: 2 Publications (2019–2021)
Related Software: Python; PyMC; Stan; eipack; EI; RxCEcolInf; …
Main Fields: Statistics (62-XX); Game theory, economics, finance, and other social and behavioral sciences (91-XX); Information and communication theory, circuits (94-XX)

DirectDM

Software Authors:   F. Bishara, J. Brod, B. Grinstein, J. Zupan
Referenced in: 3 Publications (2018–2020)
Related Software: FeynRules; MatchingTools; Wilson; SMEFTsim; DsixTools; Mathematica; …
Main Fields: Quantum theory (81-XX); Relativity and gravitational theory (83-XX); Astronomy and astrophysics (85-XX)

iFeature

Software Authors:   Chen, Z.; Zhao, P. Y.; Li, F.; Leier, A.; Marquez-Lago, T. T.; Wang, Y.; Webb, G. I.; Smith, A. I.; Daly, R. J.; Song, J.
Referenced in: 6 Publications (2018–2022)
Related Software: pLoc-mHum; iPTM-mLys; iRSpot-PseDNC; PseKNC; Quokka; iKcr-PseEns; …
Main Fields: Statistics (62-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)

iisignature

Software Authors:   Reizenstein J, Graham B.
Referenced in: 6 Publications (2019–2021)
Related Software: GitHub; torchsde; Signatory; tslearn; Quick Draw Dataset; XGBoost; …
Main Fields: Nonassociative rings and algebras (17-XX); Algebraic topology (55-XX); Probability theory and stochastic processes (60-XX)

KryPy

Software Authors:   André Gaul, Nico Schlömer
Referenced in: 6 Publications (2015–2019)
Related Software: GitHub; FFC; FEniCS; FEATFLOW; RODAS; PyNosh; …
Main Fields: Partial differential equations (35-XX); Dynamical systems and ergodic theory (37-XX); Numerical analysis (65-XX)

LALSuite

Software Authors:   Mercer R A et al.
Referenced in: 1 Publication (2022)
Related Software: Python; FINDCHIRP; SWIG; Octave; OctApps; PyCBC; …
Main Fields: Algebraic geometry (14-XX); Statistics (62-XX); Quantum theory (81-XX)

lime

Software Authors:   Thomas Lin Pedersen, Michaël Benesty
Referenced in: 1 Publication (2020)
Related Software: R; pdp; DALEX; ranger; iml; e1071; …
Main Fields: Statistics (62-XX); Computer science (68-XX)

MedOlDatschgerl

Software Authors:   Andersen, Jakob L.; Flamm, Christoph; Merkle, Daniel; Stadler, Peter F.
Referenced in: 6 Publications (2016–2021)
Related Software: BGL; Boost; BinaryTrees; z3; BioNetGen; KappaTools; …
Main Fields: Category theory; homological algebra (18-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)

MEIGO

Software Authors:   Egea JA, Henriques D, Cokelaer T, Villaverde AF, MacNamara A, Danciu DP, Banga JR, Saez-Rodriguez J.
Referenced in: 2 Publications (2010–2019)
Related Software: COPASI; R; AMIGO; tellurium; BioNetGen; PyBioNetFit; …
Main Fields: Operations research, mathematical programming (90-XX); Biology and other natural sciences (92-XX)

NodePy

Software Authors:   David Ketcheson
Referenced in: 5 Publications (2014–2022)
Related Software: imexLNL; ImplicitLNLMethods; GitHub; Matlab; Rk-opt; SUNDIALS; …
Main Fields: Partial differential equations (35-XX); Numerical analysis (65-XX); Fluid mechanics (76-XX)

PeriPy

Software Authors:   B. Boys, T. J. Dodwell, M. Hobbs, M. Girolami
Referenced in: 5 Publications (2021–2022)
Related Software: Peridigm; ParaView; SciPy; LAMMPS; Python; HPX; …
Main Fields: Partial differential equations (35-XX); Numerical analysis (65-XX); Mechanics of deformable solids (74-XX)

Pse-analysis

Software Authors:   Liu, B.; Wu, H.; Zhang, D.
Referenced in: 6 Publications (2017–2020)
Related Software: iHyd-PseCp; iPTM-mLys; iPPI-Esml; iPhos-PseEn; iCar-PseCp; iRSpot-PseDNC; …
Main Fields: Statistics (62-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)

PsychoPy

Software Authors:   Jonathan W. Peirce
Referenced in: 1 Publication (2019)
Related Software: Python; R; pysofaconventions; SOFA; brian2hears; LibROSA; …
Main Fields: Game theory, economics, finance, and other social and behavioral sciences (91-XX)

pyJac

Software Authors:   Niemeyer KE, Curtis NJ.
Referenced in: 6 Publications (2017–2021)
Related Software: Cantera; GitHub; GRI-Mech 3.0; CHEMKIN; DINOSOARS; 2DECOMP; …
Main Fields: Numerical analysis (65-XX); Fluid mechanics (76-XX); Classical thermodynamics, heat transfer (80-XX)

PyStan

Software Authors:   PyStan developers
Referenced in: 2 Publications (2019)
Related Software: Stan; PyMC; Pyro; Python; UCI-ml; NumPy; …
Main Fields: Statistics (62-XX); Computer science (68-XX)

acados

Software Authors:   Robin Verschueren, Gianluca Frison, Dimitris Kouzoupis, Niels van Duijkeren, Andrea Zanelli, Branimir Novoselnik, Jonathan Frey, Thivaharan Albin, Rien Quirynen, Moritz Diehl
Referenced in: 3 Publications (2018–2022)
Related Software: ACADO; OSQP; VIATOC; BLASFEO; qpOASES; HPIPM; …
Main Fields: (04-XX); Calculus of variations and optimal control; optimization (49-XX); Computer science (68-XX)