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Found 54 Software Packages (Results 1–54)

huge

Software Authors:   Zhao, Tuo; Liu, Han; Roeder, Kathryn; Lafferty, John; Wasserman, Larry
Referenced in: 43 Publications (2012–2022)
Related Software: glasso; R; igraph; Rcpp; BDgraph; ElemStatLearn; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Computer science (68-XX)

DrugBank

Software Authors:   Wishart, D. S.; Knox, C.; Guo, A. C.; Cheng, D.; Shrivastava, S.; Tzur, D.; Gautam, B.; Hassanali, M.
Referenced in: 17 Publications (2010–2022)
Related Software: KEGG; ChEMBL; Cytoscape; BLAST; PSI-BLAST; GitHub; …
Main Fields: Computer science (68-XX); Statistical mechanics, structure of matter (82-XX); Operations research, mathematical programming (90-XX)

Virtual library

Software Authors:   Surjanovic, S., Bingham, D.
Referenced in: 27 Publications (2015–2022)
Related Software: DiceOptim; DiceKriging; EGO; L-BFGS; Spearmint; R; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Numerical analysis (65-XX)

MARK

Software Authors:   White GC, Burnham KP
Referenced in: 22 Publications (2002–2022)
Related Software: Program MARK; R; CODA; JAGS; RMark; M-SURGE; …
Main Fields: Statistics (62-XX); Biology and other natural sciences (92-XX); Systems theory; control (93-XX)

Glmulti

Software Authors:   Vincent Calcagno, Claire de Mazancourt
Referenced in: 5 Publications (2012–2020)
Related Software: R; bestglm; leaps; BeSS; MuMIn; UCI-ml; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX)

factorcpt

Software Authors:   Matteo Barigozzi, Haeran Cho, Piotr Fryzlewicz
Referenced in: 13 Publications (2018–2022)
Related Software: wbs; basta; R; FreSpeD; CRAN; breakfast; …
Main Fields: Linear and multilinear algebra; matrix theory (15-XX); Statistics (62-XX); Game theory, economics, finance, and other social and behavioral sciences (91-XX)

OCOTILLO

Software Authors:   Goldman, Deborah; Istrail, Sorin; Lancia, Giuseppe; Piccolboni, Antonio; Walenz, Brian
Referenced in: 10 Publications (2000–2016)
Related Software:
Main Fields: Combinatorics (05-XX); Numerical analysis (65-XX); Computer science (68-XX)

COVID-Net

Software Authors:   Linda Wang, Alexander Wong
Referenced in: 2 Publications (2020–2021)
Related Software: GitHub; COVID-CAPS; CovXNet; ImageNet; V-Net; XGBoost; …
Main Fields: Statistics (62-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)

BindingDB

Software Authors:   Liu T, Lin Y, Wen X, Jorrisen RN, Gilson MK
Referenced in: 4 Publications (2009–2018)
Related Software: ChEMBL; KEGG; ImageNet; TorchIO; TensorLy; ADA; …
Main Fields: General and overarching topics; collections (00-XX); Statistics (62-XX); Computer science (68-XX)

CLIP

Software Authors:   Rhodes N, Willett P, Calvet A, Dunbar JB, Humblet C
Referenced in: 7 Publications (2006–2018)
Related Software: DIMACS; TRON; Biq Mac; SDPT3; Algorithm 457
Main Fields: Combinatorics (05-XX); Linear and multilinear algebra; matrix theory (15-XX); Numerical analysis (65-XX)

STITCH

Software Authors:   Michael Kuhn, Damian Szklarczyk, Sune Pletscher-Frankild, Thomas H. Blicher, Christian von Mering, Lars J. Jensen, Peer Bork
Referenced in: 4 Publications (2010–2018)
Related Software: DrugBank; KEGG; RSARF; AFP-Pred; ClusterViz; SDTNBI; …
Main Fields: Statistics (62-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)

BaySTDetect

Software Authors:   Li, G., Best, N., Hansell, A., Ahmed, I., Richardson, S.
Referenced in: 3 Publications (2016–2017)
Related Software: MCFDR; MMCTest; ORIOGEN; maptools; spTimer; R; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX)

dataMaid

Software Authors:   Anne Helby Petersen, Claus Thorn Ekstrøm
Referenced in: 0 Publications
Related Software: ggplot2; R; DataExplorer; dplyr; SmartEDA; rmarkdown; …
Main Fields:

DeepVS

Software Authors:   Janaina Cruz Pereira, Ernesto Raul Caffarena, Cicero dos Santos
Referenced in: 3 Publications (2018–2019)
Related Software: AutoDock; NNScore; AutoDock Vina; SODOCK; GalaxySite; GalaxyDock; …
Main Fields: Computer science (68-XX); Operations research, mathematical programming (90-XX); Biology and other natural sciences (92-XX)

QuantPsyc

Software Authors:   Thomas D. Fletcher
Referenced in: 4 Publications (2014–2022)
Related Software: R; flexmix; energy; nortest; tseries; Systemfit; …
Main Fields: Partial differential equations (35-XX); Statistics (62-XX); Computer science (68-XX)

SDSM

Software Authors:   –
Referenced in: 2 Publications (2012–2019)
Related Software:
Main Fields: Statistics (62-XX); Operations research, mathematical programming (90-XX); Game theory, economics, finance, and other social and behavioral sciences (91-XX)

HRMS

Software Authors:   Xie, Tian
Referenced in: 3 Publications (2017–2021)
Related Software:
Main Fields: Statistics (62-XX); Game theory, economics, finance, and other social and behavioral sciences (91-XX)

rSW-seq

Software Authors:   T.M. Kim, L.J. Luquette, R. Xi, P.J. Park
Referenced in: 3 Publications (2016–2017)
Related Software: CNV-seq; SeqBBS; ReadDepth
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Biology and other natural sciences (92-XX)

GBOOST

Software Authors:   Yung LS1, Yang C, Wan X, Yu W.
Referenced in: 1 Publication (2018)
Related Software: ggRandomForests; bootstrap; randomForestSRC; ElemStatLearn; hierNet; randomSurvivalForest; …
Main Fields: Statistics (62-XX); Biology and other natural sciences (92-XX)

MCTest

Software Authors:   Matthew Richardson, Christopher J.C. Burges, Erin Renshaw
Referenced in: 1 Publication (2020)
Related Software: ImageNet; CIDEr; VisKE; Midge; ConceptNet; Caffe; …
Main Fields: Computer science (68-XX)

mdopt

Software Authors:   Meyer D
Referenced in: 1 Publication (2016)
Related Software: BsMD; FrF2; R; OBsMD
Main Fields: Statistics (62-XX)

OMERO

Software Authors:   Chris Allan, Jean-Marie Burel, Josh Moore, Colin Blackburn, et. al.
Referenced in: 1 Publication (2016)
Related Software: scikit-image; OpenCV; BigDataViewer; MiToBo; ImageJFX; MorphoLibJ; …
Main Fields: Statistics (62-XX); Biology and other natural sciences (92-XX)

RReportGenerator

Software Authors:   Raffelsberger W, Krause Y, Moulinier L, Kieffer D, Morand AL, Brino L, Poch O
Referenced in: 0 Publications
Related Software: R; RGG; TeachingDemos; trackObjs; odfWeave; JGR; …
Main Fields:

Screensaver

Software Authors:   Tolopko A, Sullivan J, Erickson S, Wrobel D, Chiang S, Rudnicki K, Rudnicki S, Nale J, Selfors L, Greenhouse D, Muhlich J, Shamu C.
Referenced in: 0 Publications
Related Software: Spring; Hibernate; PostgreSQL; BIRT; Commons Math; JasperReports; …
Main Fields:

TagCleaner

Software Authors:   Schmieder R, Lim YW, Rohwer F et al
Referenced in: 1 Publication (2015)
Related Software: OligoWalk; OptiRNAi; ASTALAVISTA; PredGPI; SPEPlip; BaCelLo; …
Main Fields: General and overarching topics; collections (00-XX); Biology and other natural sciences (92-XX)

Wndchrm

Software Authors:   Shamir, L.; Orlov, N.; Eckley, D. M.; Macura, T.; Johnston, J.; Goldberg, I. G.
Referenced in: 1 Publication (2016)
Related Software: SIFT; Vlfeat; ElemStatLearn; CellProfiler; ImageJ; WEKA; …
Main Fields: Computer science (68-XX); Biology and other natural sciences (92-XX)

AMMOS_ProtLig

Software Authors:   Jereva, Dessislava; Pajeva, Ilza; Pencheva, Tania
Referenced in: 1 Publication (2012)
Related Software: MOE; AMMP; AMMOS
Main Fields: Computer science (68-XX); Biology and other natural sciences (92-XX)

BioMet

Software Authors:   Cvijovic, Marija; Olivares-Hernández, Roberto; Agren, Rasmus; Dahr, Niklas; Vongsangnak, Wanwipa; Nookaew, Intawat; Patil, Kiran Raosaheb; Nielsen, Jens
Referenced in: 0 Publications
Related Software:
Main Fields:

Brunn

Software Authors:   Alvarsson, Jonathan; Andersson, Claes; Spjuth, Ola; Larsson, Rolf; Wikberg, Jarl E.S.
Referenced in: 0 Publications
Related Software: Spring; BIRT; Screensaver; Commons Math; JasperReports; Bioclipse; …
Main Fields:

ChemoPy

Software Authors:   D.-S. Cao, Q.-S. Xu, Q.-N. Hu, Y.-Z. Liang
Referenced in: 1 Publication (2018)
Related Software:
Main Fields: Statistics (62-XX)

ConsDock

Software Authors:   Paul N.; Rognan D.
Referenced in: 1 Publication (2004)
Related Software: AutoDock
Main Fields: Operations research, mathematical programming (90-XX); Biology and other natural sciences (92-XX)

ContaMiner

Software Authors:   Hungler, Arnaud, Afaque Momin, Kay Diederichs, Stefan T Arold
Referenced in: 0 Publications
Related Software: EXI; molstack; SynchWeb; CCP4; Coot; xtal.js; …
Main Fields:

CovidCTNet

Software Authors:   Tahereh Javaheri, Morteza Homayounfar, Zohreh Amoozgar, Reza Reiazi, Fatemeh Homayounieh, Engy Abbas, Azadeh Laali, Amir Reza Radmard, Mohammad Hadi Gharib, Seyed Ali Javad Mousavi, Omid Ghaemi, Rosa Babaei, Hadi Karimi Mobin, Mehdi Hosseinzadeh, Rana Jahanban-Esfahlan, Khaled Seidi, Mannudeep K. Kalra, Guanglan Zhang, L.T. Chitkushev, Benjamin Haibe-Kains, Reza Malekzadeh, Reza Rawassizadeh
Referenced in: 0 Publications
Related Software: ReCoNet; CAiRE-COVID; COVID-CXNet; CovidGAN; COVID-CAPS; CovXNet; …
Main Fields:

DeepVF

Software Authors:   R. Xie, J. Li, J. Wang, W. Dai, A. Leier, T. Marquez-Lago, et al.
Referenced in: 1 Publication (2022)
Related Software: hCKSAAP_UbSite; UPFPSR; iFeature; GitHub; PseAAC
Main Fields: Computer science (68-XX); Biology and other natural sciences (92-XX)

GraphFitI

Software Authors:   Blauth, A., Pigeot, I
Referenced in: 1 Publication (2004)
Related Software: MIM; GAToolBox; Matlab
Main Fields: Statistics (62-XX); Operations research, mathematical programming (90-XX)

HCViewer

Software Authors:   Starunova, Olga A.; Rudnev, Sergey G.; Starodubov, Vladimir I.
Referenced in: 1 Publication (2017)
Related Software: Leaflet; leaflet; shiny; RStudio; GAMLSS; R-Geo; …
Main Fields: Statistics (62-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)

httk

Software Authors:   John Wambaugh, Robert Pearce, Caroline Ring, Jimena Davis, Nisha Sipes, R. Woodrow Setzer
Referenced in: 0 Publications
Related Software: R; ggplot2; deSolve; odesolve; Simcyp; MCSim
Main Fields:

Information

Software Authors:   Larsen Kim
Referenced in: 0 Publications
Related Software: car; glmdisc; corrplot; ClustVarLV; woe; Rprofet; …
Main Fields:

MatrixLMnet

Software Authors:   Liang, Jane W.; Sen, Śaunak
Referenced in: 1 Publication (2022)
Related Software: sma; GitHub; data.table; R/qtl; selectiveInference; Julia; …
Main Fields: Statistics (62-XX)

MultiPaths

Software Authors:   Josep Marín-Llaó, Sarah Mubeen, Alexandre Perera-Lluna, Martin Hofmann-Apitius, Sergio Picart-Armada, Daniel Domingo-Fernández
Referenced in: 1 Publication (2021)
Related Software:
Main Fields: Dynamical systems and ergodic theory (37-XX); Information and communication theory, circuits (94-XX)

multiSnpnet

Software Authors:   Qian, Junyang; Tanigawa, Yosuke; Li, Ruilin; Tibshirani, Robert; Rivas, Manuel A.; Hastie, Trevor
Referenced in: 1 Publication (2022)
Related Software:
Main Fields: Statistics (62-XX)

netprioR

Software Authors:   Schmich, Fabian; Kuipers, Jack; Merdes, Gunter; Beerenwinkel, Niko
Referenced in: 1 Publication (2019)
Related Software: PRMLT; gespeR; ToppGene Suite; GeneMANIA; GMRFLib; R
Main Fields: Statistics (62-XX); Biology and other natural sciences (92-XX)

plateCore

Software Authors:   Strain, Errol; Hahne, Florian; Brinkman, Ryan R.; Haaland, Perry
Referenced in: 0 Publications
Related Software: flowClust; FlowJo; flowViz; flowQ; flowCore; Bioconductor
Main Fields:

PyRx

Software Authors:   Dallakyan, S.; Olson, A. J.
Referenced in: 1 Publication (2018)
Related Software: VADAR; Chimera; Gromacs
Main Fields: Biology and other natural sciences (92-XX)

RNAmmer

Software Authors:   Karin Lagesen, Peter Hallin, Einar Andreas Rødland, Hans-Henrik Stærfeldt, Torbjørn Rognes, David W. Ussery
Referenced in: 1 Publication (2016)
Related Software: PlantTFDB; eggNOG; ELM; dbCAN; antiSMASH; dissectHMMER; …
Main Fields: Statistics (62-XX); Biology and other natural sciences (92-XX)

Ryoan

Software Authors:   Hunt, T., Zhu, Z., Xu, Y., Peter, S., Witchel, E.
Referenced in: 1 Publication (2018)
Related Software: MiniBox; Panoply; VeriCount; Docker
Main Fields: Computer science (68-XX); Information and communication theory, circuits (94-XX)

SIGNATURE

Software Authors:   James Z. Chen, Nikolaus Grigorieff
Referenced in: 0 Publications
Related Software: FREALIGN; CTFFIND; TMaCS; TiltPicker; EMPIAR; DeepPicker
Main Fields:

SMLE

Software Authors:   Qianxiang Zang, Chen Xu, Kelly Burkett
Referenced in: 0 Publications
Related Software: matrixcalc; glmnet; SIS; mvnfast; sim1000G; R
Main Fields:

tilting

Software Authors:   Haeran Cho, Piotr Fryzlewicz
Referenced in: 1 Publication (2021)
Related Software: leaps; stabs; glmnet; SSS; DistAl
Main Fields: Statistics (62-XX); Computer science (68-XX)

TM5-FASST

Software Authors:   Van Dingenen, R., Dentener, F., Crippa, M., Leitao, J., Marmer, E., Rao, S., Solazzo, E., Valentini, L.
Referenced in: 0 Publications
Related Software: AirQ+; EmissV; BenMAP-CE; GCAM; SMOKE; R; …
Main Fields:

aop

Software Authors:   Lyle D. Burgoon
Referenced in: 0 Publications
Related Software:
Main Fields:

caRpools

Software Authors:   Winter, Jan; Breinig, Marco; Heigwer, Florian; Brügemann, Dirk; Leible, Svenja; Pelz, Oliver; Zhan, Tianzuo; Boutros, Michael
Referenced in: 0 Publications
Related Software:
Main Fields:

metagear

Software Authors:   Marc J. Lajeunesse
Referenced in: 0 Publications
Related Software:
Main Fields:

ToxDBScan

Software Authors:   M. Römer; L. Backert; J. Eichner; A. Zell
Referenced in: 0 Publications
Related Software:
Main Fields: