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Found 77 Software Packages (Results 1–77)

Manopt

Software Authors:   Nicolas Boumal; Bamdev Mishra; P.-A. Absil; Rodolphe Sepulchre
Referenced in: 122 Publications (2013–2022)
Related Software: RTRMC; Matlab; ROPTLIB; Pymanopt; UCI-ml; GitHub; …
Main Fields: Linear and multilinear algebra; matrix theory (15-XX); Statistics (62-XX); Numerical analysis (65-XX)

Kernlab

Software Authors:   Alexandros Karatzoglou; Alex Smola; Kurt Hornik
Referenced in: 87 Publications (2007–2022)
Related Software: R; randomForest; UCI-ml; e1071; caret; rpart; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Computer science (68-XX)

MULAN

Software Authors:   Tsoumakas, Grigorios; Spyromitros-Xioufis, Eleftherios; Vilcek, Jozef; Vlahavas, Ioannis
Referenced in: 62 Publications (2011–2022)
Related Software: ML-KNN; BoosTexter; LIBSVM; MEKA; WEKA; C4.5; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Computer science (68-XX)

Eigentaste

Software Authors:   Goldberg, Ken; Roeder, Theresa; Gupta, Dhruv; Perkins, Chris
Referenced in: 47 Publications (2001–2022)
Related Software: MovieLens; SDPT3; PROPACK; ADMiRA; softImpute; SDPLR; …
Main Fields: Linear and multilinear algebra; matrix theory (15-XX); Numerical analysis (65-XX); Computer science (68-XX)

SINDy

Software Authors:   Loiseau, Jean-Christophe; Brunton, Steven L.
Referenced in: 31 Publications (2017–2022)
Related Software: redbKIT; Nek5000; PDE-Net; VAMPnets; Adam; Loewner; …
Main Fields: Dynamical systems and ergodic theory (37-XX); Numerical analysis (65-XX); Computer science (68-XX)

LS-SVMlab

Software Authors:   J.A.K. Suykens, T. Van Gestel, J. De Brabanter, B. De Moor, J. Vandewalle
Referenced in: 25 Publications (2006–2020)
Related Software: Matlab; UCI-ml; LIBSVM; RSVM; SVM Toolbox; longmemo; …
Main Fields: Statistics (62-XX); Computer science (68-XX); Mechanics of deformable solids (74-XX)

HDclassif

Software Authors:   Laurent Bergé, Charles Bouveyron, Stéphane Girard
Referenced in: 13 Publications (2014–2022)
Related Software: R; mclust; PGMM; CRAN Task Views; flexmix; mixture; …
Main Fields: Statistics (62-XX); Computer science (68-XX); Information and communication theory, circuits (94-XX)

MADMM

Software Authors:   Artiom Kovnatsky, Klaus Glashoff, Michael M. Bronstein
Referenced in: 16 Publications (2017–2022)
Related Software: Manopt; SDPLR; Steerable pyramid; Matrix Means Toolbox; FPC_AS; Manopt.jl; …
Main Fields: Partial differential equations (35-XX); Calculus of variations and optimal control; optimization (49-XX); Numerical analysis (65-XX)

ZIFA

Software Authors:   Pierson, E.; Yau, C.
Referenced in: 13 Publications (2018–2021)
Related Software: CIDR; t-SNE; MAST; SNN-Cliq; zinbwave; DESeq2; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Computer science (68-XX)

Isomap

Software Authors:   Tenenbaum, J. B., V. de Silva, J. C. Langford
Referenced in: 10 Publications (2007–2019)
Related Software: UCI-ml; R; Spalart-Allmaras; TAU; fc; Algorithm 97; …
Main Fields: Statistics (62-XX); Computer science (68-XX); Fluid mechanics (76-XX)

rsvd

Software Authors:   N. Benjamin Erichson
Referenced in: 10 Publications (2017–2022)
Related Software: R; randUTV; RandNLA; RSVDPACK; RSpectra; ARPACK; …
Main Fields: Linear and multilinear algebra; matrix theory (15-XX); Dynamical systems and ergodic theory (37-XX); Statistics (62-XX)

MDR

Software Authors:   Hahn L. W.; Ritchie M. D.; Moore J. H.
Referenced in: 5 Publications (2005–2019)
Related Software: ReliefF; SNPStats; logicFS; plspm; PLINK; cpvSNP; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Operations research, mathematical programming (90-XX)

SpectralCAT

Software Authors:   Gil David, Amir Averbuch
Referenced in: 8 Publications (2012–2020)
Related Software: UCI-ml; AutoClass; clusfind; COOLCAT; MADM; FlockStream; …
Main Fields: Statistics (62-XX); Computer science (68-XX)

CIDR

Software Authors:   Lin, P., Troup, M., Ho, J. W. K.
Referenced in: 7 Publications (2018–2021)
Related Software: ZIFA; MAST; SC3; SNN-Cliq; DESeq2; DEseq; …
Main Fields: Statistics (62-XX); Biology and other natural sciences (92-XX)

dr

Software Authors:   van der Maaten, L.
Referenced in: 6 Publications (2014–2021)
Related Software: SPGL1; UCI-ml; Matlab; SpaSM; MMST; LDRTools; …
Main Fields: Statistics (62-XX); Computer science (68-XX); Operations research, mathematical programming (90-XX)

catch22

Software Authors:   Carl H Lubba, Sarab S Sethi, Philip Knaute, Simon R Schultz, Ben D Fulcher, Nick S Jones
Referenced in: 5 Publications (2020–2022)
Related Software: rocket; FFORMA; hctsa; tsfeatures; XGBoost; SFA; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Computer science (68-XX)

coDaPack

Software Authors:   Thió-Henestrosa, S.; Martín-Fernández, J.A.
Referenced in: 6 Publications (2005–2019)
Related Software: compositions; Excel; zCompositions; R; robCompositions; Ternplot; …
Main Fields: General and overarching topics; collections (00-XX); Probability theory and stochastic processes (60-XX); Statistics (62-XX)

iFeature

Software Authors:   Chen, Z.; Zhao, P. Y.; Li, F.; Leier, A.; Marquez-Lago, T. T.; Wang, Y.; Webb, G. I.; Smith, A. I.; Daly, R. J.; Song, J.
Referenced in: 6 Publications (2018–2022)
Related Software: pLoc-mHum; iPTM-mLys; iRSpot-PseDNC; PseKNC; Quokka; iKcr-PseEns; …
Main Fields: Statistics (62-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)

Intrinsic-Dimension

Software Authors:   Daniele Granata, Vincenzo Carnevale
Referenced in: 4 Publications (2018–2021)
Related Software: IntDim; Scikit; pyFCI; OpenML; TLE; drtoolbox; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX)

slingshot

Software Authors:   Kelly Street, Davide Risso, Diya Das, Sandrine Dudoit, Koen Van den Berge, Robrecht Cannoodt
Referenced in: 5 Publications (2008–2021)
Related Software: zinbwave; PMA; DESeq2; UMAP; ZIFA; Pyglrm; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Computer science (68-XX)

ANTsR

Software Authors:   Avants BB, Kandel BM, Duda JT, Cook PA, Tustison NJ
Referenced in: 1 Publication (2019)
Related Software: oro.nifti; fslr; R; adimpro; oro.dicom; KernSmooth; …
Main Fields: Statistics (62-XX); Biology and other natural sciences (92-XX); Information and communication theory, circuits (94-XX)

FST

Software Authors:   Somol, P.; Pudil, P.
Referenced in: 4 Publications (2002–2008)
Related Software: UCI-ml
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Computer science (68-XX)

Mash

Software Authors:   Ondov, B.D., et al.
Referenced in: 4 Publications (2019–2022)
Related Software: Mugsy; MLGO; Mauve; ART; ABySS; Velvet; …
Main Fields: Statistics (62-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)

Rdimtools

Software Authors:   Kisung You, Changhee Suh
Referenced in: 0 Publications
Related Software: Scikit; Python; ider; coRanking; RcppArmadillo; Rcpp; …
Main Fields:

BDSVDX

Software Authors:   Marques, Osni; Demmel, James; Vasconcelos, Paulo B.
Referenced in: 3 Publications (2017–2020)
Related Software: ScaLAPACK; LAPACK; JDQZ; JDQR; TAU; DLMF; …
Main Fields: Linear and multilinear algebra; matrix theory (15-XX); Numerical analysis (65-XX)

dml

Software Authors:   Yuan Tang, Gao Tao, Xiao Nan
Referenced in: 2 Publications (2020)
Related Software: pyDML; metric-learn; LMNN; Scikit; ggplot2; rARPACK; …
Main Fields: Computer science (68-XX)

freqdom

Software Authors:   Hormann S., Kidzinski L.
Referenced in: 1 Publication (2018)
Related Software: MTS; zoo; RcppArmadillo; Rcpp; gdpc; R; …
Main Fields: Statistics (62-XX)

GP-VAE

Software Authors:   Vincent Fortuin, Dmitry Baranchuk, Gunnar Rätsch, Stephan Mandt
Referenced in: 2 Publications (2021)
Related Software: PMTK; MoCoGAN; PRMLT; WaveNet; PixelVAE; TasNet; …
Main Fields: Computer science (68-XX)

MotionCharts

Software Authors:   Al-Aziz, J.; Christou, N.; Dinov, I. D.
Referenced in: 1 Publication (2014)
Related Software: SOCR
Main Fields: Statistics (62-XX)

pyDML

Software Authors:   Juan Luis Suárez, Salvador García, Francisco Herrera
Referenced in: 3 Publications (2020–2021)
Related Software: LMNN; metric-learn; dml; Scikit; rNPBST; extended_rmcv.m; …
Main Fields: Computer science (68-XX)

SpectralNET

Software Authors:   Forman JJ1, Clemons PA, Schreiber SL, Haggarty SJ.
Referenced in: 2 Publications (2011)
Related Software: Graph Investigator; StOCNET; LAPACK; GeneRAGE; ProClust; BLAST; …
Main Fields: Combinatorics (05-XX); Computer science (68-XX); Operations research, mathematical programming (90-XX)

SSA Toolbox

Software Authors:   Müller, Jan Saputra; Von Bünau, Paul; Meinecke, Frank C.; Király, Franz J.; Müller, Klaus-Robert
Referenced in: 3 Publications (2009–2012)
Related Software: FastICA; Matlab
Main Fields: Statistics (62-XX); Computer science (68-XX); Information and communication theory, circuits (94-XX)

adaptiveGPCA

Software Authors:   Julia Fukuyama
Referenced in: 1 Publication (2019)
Related Software: ape; shiny; DESeq2; PMA; R
Main Fields: Statistics (62-XX)

coRanking

Software Authors:   Guido Kraemer
Referenced in: 0 Publications
Related Software: Rdimtools; RcppArmadillo; Rcpp; dyndimred; R; ggplot2; …
Main Fields:

Divvy

Software Authors:   Joshua M. Lewis; Virginia R. de Sa; Laurens van der Maaten
Referenced in: 1 Publication (2019)
Related Software: GloVe; SRASS; E-KRHyper; YAGO; ConceptNet; E Theorem Prover; …
Main Fields: Mathematical logic and foundations (03-XX); Computer science (68-XX)

dyndimred

Software Authors:   Robrecht Cannoodt; Wouter Saelens
Referenced in: 0 Publications
Related Software: Rdimtools; coRanking; RcppArmadillo; Rcpp; R; ggplot2; …
Main Fields:

Eigen-GNN

Software Authors:   Ziwei Zhang, Peng Cui, Jian Pei, Xin Wang, Wenwu Zhu
Referenced in: 0 Publications
Related Software: PairNorm; DropEdge; GraphSAGE; DeepGCNs; AutoKeras; LightGBM; …
Main Fields:

FIt-SNE

Software Authors:   George C. Linderman, Manas Rachh, Jeremy G. Hoskins, Stefan Steinerberger, Yuval Kluger
Referenced in: 1 Publication (2021)
Related Software: LargeVis; Scikit; UMAP; Multicore-tsne; COIL-100; Numba; …
Main Fields: Computer science (68-XX)

gdpc

Software Authors:   Daniel Peña, Ezequiel Smucler, Victor Yohai
Referenced in: 0 Publications
Related Software: MTS; zoo; RcppArmadillo; Rcpp; freqdom; R; …
Main Fields:

GraphDemo

Software Authors:   Matthias Hein; Ulrike von Luxburg
Referenced in: 1 Publication (2012)
Related Software: Matlab
Main Fields: Linear and multilinear algebra; matrix theory (15-XX); Statistics (62-XX); Numerical analysis (65-XX)

hydra+

Software Authors:   Keller-Ressel, Martin; Nargang, Stephanie
Referenced in: 2 Publications (2020–2021)
Related Software: HyPy; Rigel; hydra; igraphdata; ARPACK; L-BFGS-B; …
Main Fields: Functions of a complex variable (30-XX); Functional analysis (46-XX); Operator theory (47-XX)

HyperTools

Software Authors:   Andrew C. Heusser, Kirsten Ziman, Lucy L. W. Owen, Jeremy R. Manning
Referenced in: 0 Publications
Related Software: Python; Seaborn; AS 136; Scikit; pandas; NumPy; …
Main Fields:

lfda

Software Authors:   Yuan Tang, Wenxuan Li
Referenced in: 0 Publications
Related Software: ggfortify; ggplot2; strucchange; lattice; dlm; cluster (R); …
Main Fields:

openTSNE

Software Authors:   Poličar, P. G., Stražar, M., Zupan, B.
Referenced in: 2 Publications (2021–2022)
Related Software: LargeVis; TriMap; UMAP; t-SNE; largeVis; Scikit; …
Main Fields: Statistics (62-XX); Computer science (68-XX)

orthoDr

Software Authors:   Sun, Qiang; Zhu, Ruoqing; Wang, Tao; Zeng, Donglin
Referenced in: 1 Publication (2019)
Related Software: dr; R; MAVE; nsdr; ldr; itdr; …
Main Fields: Statistics (62-XX)

Tapkee

Software Authors:   Lisitsyn, Sergey; Widmer, Christian; Garcia, Fernando J.Iglesias
Referenced in: 1 Publication (2013)
Related Software: Armadillo; RSpectra; Scikit; coRanking; dimRed; CVXR; …
Main Fields: Computer science (68-XX)

TriMap

Software Authors:   Ehsan Amid, Manfred K. Warmuth
Referenced in: 2 Publications (2021–2022)
Related Software: LargeVis; openTSNE; UMAP; t-SNE; largeVis; Scikit; …
Main Fields: Statistics (62-XX); Computer science (68-XX)

BBTools

Software Authors:   Esben Høgh-Rasmussen
Referenced in: 0 Publications
Related Software: EMD
Main Fields:

DAMIS

Software Authors:   Bernatavičienė, Jolita; Dzemyda, Gintautas; Kurasova, Olga; Marcinkevičius, Virginijus; Medvedev, Viktor; Treigys, Povilas
Referenced in: 1 Publication (2016)
Related Software: Orange4WS; Orange; rapidminer; KNIME; WEKA
Main Fields: Statistics (62-XX); Numerical analysis (65-XX)

DeepView

Software Authors:   Alexander Schulz, Fabian Hinder, Barbara Hammer
Referenced in: 1 Publication (2021)
Related Software: LargeVis; oocPCA; FixMatch; ReMixMatch; openTSNE; TriMap; …
Main Fields: Computer science (68-XX)

dimRed

Software Authors:   Guido Kraemer
Referenced in: 0 Publications
Related Software: Armadillo; RSpectra; Scikit; Tapkee; coRanking; CVXR; …
Main Fields:

DiscoRhythm

Software Authors:   Matthew Carlucci, Algimantas Kriščiūnas, Haohan Li, Povilas Gibas, Karolis Koncevičius, Art Petronis, Gabriel Oh
Referenced in: 0 Publications
Related Software: ggplot2; RColorBrewer; PhysioToolkit; doParallel; shiny; gridExtra; …
Main Fields:

drtoolbox

Software Authors:   van der Maaten, L.
Referenced in: 0 Publications
Related Software: Intrinsic-Dimension; pyFCI; OpenML; TLE; IntDim; Rdimtools; …
Main Fields:

ECA-Net

Software Authors:   Qilong Wang, Banggu Wu, Pengfei Zhu, Peihua Li, Wangmeng Zuo, Qinghua Hu
Referenced in: 0 Publications
Related Software: T2T-ViT; CutMix; mixup; CBAM; EfficientNet; BERT; …
Main Fields:

FakeCatcher

Software Authors:   Umur Aybars Ciftci, Ilke Demir
Referenced in: 1 Publication (2021)
Related Software: Celeb-DF; FaceForensics; Face2Face; ManTra-Net; BusterNet; DeeperForensics; …
Main Fields: Computer science (68-XX)

intRinsic

Software Authors:   Francesco Denti
Referenced in: 0 Publications
Related Software: Rdimtools; ggplot2; HiDimDA; fractaldim; CODA; Rtsne; …
Main Fields:

logisticPCA

Software Authors:   Andrew J. Landgraf
Referenced in: 0 Publications
Related Software: partykit; glmdisc; car; corrplot; ClustVarLV; woe; …
Main Fields:

MLib

Software Authors:   Apache
Referenced in: 1 Publication (2021)
Related Software: Apache Spark; UCI-ml
Main Fields: Computer science (68-XX)

Multiview

Software Authors:   Samir Kanaan-Izquierdo, Andrey Ziyatdinov, Maria Araceli Burguño, Alexandre Perera-Lluna
Referenced in: 1 Publication (2021)
Related Software: mvlearn; AJIVE; Python; JIVE; Scikit; UCI-ml
Main Fields: Computer science (68-XX)

nsdr

Software Authors:   Bing Li, Kyongwon Kim
Referenced in: 0 Publications
Related Software: dr; MAVE; orthoDr; ldr; R; itdr
Main Fields:

oocPCA

Software Authors:   George C. Linderman, Manas Rachh, Jeremy G. Hoskins, Stefan Steinerberger, Yuval Kluger
Referenced in: 1 Publication (2021)
Related Software: LargeVis; FixMatch; DeepView; ReMixMatch; openTSNE; TriMap; …
Main Fields: Computer science (68-XX)

partycls

Software Authors:   Paret, Joris; Coslovich, Daniele
Referenced in: 0 Publications
Related Software: ESPResSo++; LAMMPS; OVITO; Mdtraj; DScribe; ESPResSo; …
Main Fields:

PBMDR

Software Authors:   Yang, Cheng-Hong; Yang, Huai-Shuo; Chuang, Li-Yeh
Referenced in: 1 Publication (2019)
Related Software: MDR
Main Fields: Operations research, mathematical programming (90-XX); Biology and other natural sciences (92-XX)

PyIVA

Software Authors:   Austin Kim, Zois Boukouvalas, Daniel C. Elton
Referenced in: 0 Publications
Related Software: Molecular Machine Learning Toolkit; iva_laplace; Rdkit; GitHub; Python
Main Fields:

PyKale

Software Authors:   Haiping Lu, Xianyuan Liu, Robert Turner, Peizhen Bai, Raivo E Koot, Shuo Zhou, Mustafa Chasmai, Lawrence Schobs
Referenced in: 0 Publications
Related Software: ImageNet; TorchIO; TensorLy; ADA; GripNet; DeepAffinity; …
Main Fields:

QDA by Projection

Software Authors:   Wu, Ruiyang; Hao, Ning
Referenced in: 1 Publication (2022)
Related Software: GitHub; RaSEn; rda; UCI-ml; Matlab
Main Fields: Statistics (62-XX)

RobustDMD

Software Authors:   Askham, Travis; Zheng, Peng; Aravkin, Aleksandr; Kutz, J. Nathan
Referenced in: 1 Publication (2022)
Related Software: UNLocBoX
Main Fields: Dynamical systems and ergodic theory (37-XX); Numerical analysis (65-XX)

SimpSOM

Software Authors:   Federico Comitani
Referenced in: 0 Publications
Related Software: kohonen; NeuPy; SOMPY; MiniSom; Imageio; Plotly; …
Main Fields:

SingleCellExperiment

Software Authors:   Aaron Lun, Davide Risso, Keegan Korthauer, Kevin Rue-Albrecht
Referenced in: 0 Publications
Related Software: BiocParallel; t-SNE; Bioconductor; R; scPCA
Main Fields:

Sketchmap

Software Authors:   De, S., Ceriotti, M.
Referenced in: 0 Publications
Related Software: CheS-Mapper; ChemMapper; librascal; FUn; QUIP; Jmol; …
Main Fields:

tauPFC

Software Authors:   Bergesio, Andrea; Szretter Noste, María Eugenia; Yohai, Víctor J.
Referenced in: 1 Publication (2021)
Related Software: GitHub; rrcov; ElemStatLearn; LDR; robustbase; alr3; …
Main Fields: Statistics (62-XX)

ThreSPCA

Software Authors:   Chowdhury, Agniva; Bose, Aritra; Zhou, Samson; Woodruff, David P.; Drineas, Petros
Referenced in: 1 Publication (2022)
Related Software: STRUCTURE; CluStrat; TeraPCA; clusterProfiler
Main Fields: Statistics (62-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)

TPOT-MDR

Software Authors:   Andrew Sohn, Randal S. Olson, Jason H. Moore
Referenced in: 0 Publications
Related Software: TPOT; xgboost
Main Fields:

TSrepr

Software Authors:   Peter Laurinec
Referenced in: 0 Publications
Related Software: jmotif; TSMining; Rcpp; R
Main Fields:

ugtm

Software Authors:   Héléna Alexandra Gaspar
Referenced in: 0 Publications
Related Software: UCI-ml; Python; Altair; D3.js; Matplotlib; SciPy; …
Main Fields:

DimensionReduction

Software Authors:   Deng Cai, Xiaofei He, Jiawei Han, and Hong-Jiang Zhang
Referenced in: 0 Publications
Related Software:
Main Fields:

mvdalab

Software Authors:   Nelson Lee Afanador, Thanh Tran, and Lionel Blanchet
Referenced in: 0 Publications
Related Software:
Main Fields: