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Found 221 Software Packages (Results 1–100)

node2vec

Software Authors:   Aditya Grover, Jure Leskovec
Cited in: 82 Publications (2017–2022)
Related Software: DeepWalk; word2vec; GraRep; t-SNE; Adam; struc2vec; …
Main Fields: Combinatorics (05-XX); Statistics (62-XX); Computer science (68-XX)

vegan

Software Authors:   Jari Oksanen, F. Guillaume Blanchet, Roeland Kindt, Pierre Legendre, Peter R. Minchin, R. B. O'Hara, Gavin L. Simpson, Peter Solymos, M. Henry H. Stevens, Helene Wagner
Cited in: 29 Publications (2007–2021)
Related Software: R; ade4; ggplot2; ecodist; FactoMineR; Picante; …
Main Fields: Combinatorics (05-XX); Probability theory and stochastic processes (60-XX); Statistics (62-XX)

SMOTEBoost

Software Authors:   Barnan Das; Nitesh V. Chawla, Aleksandar Lazarevic, Lawrence O. Hall, Kevin W. Bowyer
Cited in: 28 Publications (2004–2022)
Related Software: SMOTE; UCI-ml; JStatCom; AdaCost; MWMOTE; KEEL; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Computer science (68-XX)

ParadisEO-MOEO

Software Authors:   DOLPHIN project-team, Inria Lille
Cited in: 20 Publications (2009–2021)
Related Software: PISA; SPEA2; ParaDisEO; jMetal; MOEA/D; VRP; …
Main Fields: General and overarching topics; collections (00-XX); Mathematical logic and foundations (03-XX); Computer science (68-XX)

AFP-Pred

Software Authors:   Kandaswamy, K. K.; Martinetz, T.; Moller, S.; Suganthan, P. N.; Sridharan, S.; Pugalenthi, G.
Cited in: 23 Publications (2011–2019)
Related Software: Cell-PLoc; iLoc-Euk; iRSpot-TNCPseAAC; iDNA-Prot; iSNO-PseAAC; iPPI-Esml; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Computer science (68-XX)

AbYSS

Software Authors:   Nebro, A.J., Luna, F., Alba, E., Dorronsoro, B., Durillo, J.J., Beham, A.
Cited in: 19 Publications (2008–2021)
Related Software: SPEA2; jMetal; MOEA/D; Scatter Search; SMPSO; PAES; …
Main Fields: Numerical analysis (65-XX); Computer science (68-XX); Optics, electromagnetic theory (78-XX)

Rhinoceros

Software Authors:   Robert McNeel & Associates
Cited in: 17 Publications (2004–2022)
Related Software: ISOGAT; Grasshopper; Mathematica; Maya; PETSc; Gmsh; …
Main Fields: General and overarching topics; collections (00-XX); Numerical analysis (65-XX); Mechanics of deformable solids (74-XX)

MCPSO

Software Authors:   Niu, Ben; Zhu, Yunlong; He, Xiaoxian; Wu, Henry
Cited in: 18 Publications (2007–2022)
Related Software: WOA; CEC 05; PySwarms; POPMUSIC; SSA; ALO; …
Main Fields: Operator theory (47-XX); Computer science (68-XX); Operations research, mathematical programming (90-XX)

MEGAN

Software Authors:   Daniel H. Huson, Alexander F. Auch, Ji Qi, Stephan C. Schuster
Cited in: 5 Publications (2010–2017)
Related Software: TETRA; TACOA; BLAST; ONE; RAST; PSI-BLAST; …
Main Fields: Combinatorics (05-XX); Statistics (62-XX); Computer science (68-XX)

QPLIB

Software Authors:   Furini, Fabio; Traversi, Emiliano; Belotti, Pietro; Frangioni, Antonio; Gleixner, Ambros; Gould, Nick; Liberti, Leo; Lodi, Andrea; Misener, Ruth; Mittelmann, Hans; Sahinidis, Nikolaos V.; Vigerske, Stefan; Wiegele, Angelika
Cited in: 16 Publications (2018–2022)
Related Software: CPLEX; Gurobi; SCIP; QuadProgBB; BARON; Mosek; …
Main Fields: Calculus of variations and optimal control; optimization (49-XX); Numerical analysis (65-XX); Computer science (68-XX)

EstimateS

Software Authors:   Colwell, R.K.
Cited in: 10 Publications (2002–2021)
Related Software: Rcapture; iNEXT; vegan; ws2m; SPADE; asymptor; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Numerical analysis (65-XX)

neuRosim

Software Authors:   Welvaert, M., Durnez, J., Moerkerke, B., Verdoolaege, G., Rosseel, Y.
Cited in: 10 Publications (2016–2022)
Related Software: R; AFNI; FSL; Rniftilib; SPM; CRAN Task Views; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Biology and other natural sciences (92-XX)

MODENAR

Software Authors:   Alatas, B.; Akin, E.; Karci, A.
Cited in: 6 Publications (2008–2020)
Related Software: QuantMiner; MOEA/D; KEEL; SPEA2; GSA; NICGAR; …
Main Fields: Numerical analysis (65-XX); Computer science (68-XX); Operations research, mathematical programming (90-XX)

PARTITION

Software Authors:   Joseph A. Veech; Thomas O. Crist
Cited in: 11 Publications (1990–2009)
Related Software: Find; primer; spatial; deSolve; simecol; R; …
Main Fields: Combinatorics (05-XX); Number theory (11-XX); Computer science (68-XX)

StackGAN

Software Authors:   Han Zhang, Tao Xu, Hongsheng Li, Shaoting Zhang, Xiaogang Wang, Xiaolei Huang, Dimitris Metaxas
Cited in: 8 Publications (2020–2022)
Related Software: Wasserstein GAN; Adam; CIFAR; pix2pix; CycleGAN; LR-GAN; …
Main Fields: Statistics (62-XX); Computer science (68-XX); Statistical mechanics, structure of matter (82-XX)

BEGAN

Software Authors:   David Berthelot, Thomas Schumm, Luke Metz
Cited in: 7 Publications (2018–2022)
Related Software: Wasserstein GAN; Adam; MNIST; pix2pix; CycleGAN; ImageNet; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Computer science (68-XX)

GP-COACH

Software Authors:   Berlanga, F. J.; Rivera, A. J.; Del Jesus, M. J.; Herrera, F.
Cited in: 2 Publications (2011–2017)
Related Software: KEEL; UCI-ml; FURIA; MEPAR; C4.5; JCLEC; …
Main Fields: Statistics (62-XX); Computer science (68-XX); Operations research, mathematical programming (90-XX)

MOCell

Software Authors:   Nebro, Antonio J.; Durillo, Juan J.; Luna, Francisco; Dorronsoro, Bernabé; Alba, Enrique
Cited in: 10 Publications (2009–2021)
Related Software: SPEA2; jMetal; MOEA/D; AbYSS; JCell; Scikit-multiflow; …
Main Fields: Numerical analysis (65-XX); Computer science (68-XX); Operations research, mathematical programming (90-XX)

NR-2L

Software Authors:   Wang P, Xiao X, Chou KC
Cited in: 9 Publications (2012–2018)
Related Software: Cell-PLoc; iLoc-Euk; iLoc-Virus; GPCR-2L; iLoc-Gpos; Plant-mPLoc; …
Main Fields: Statistics (62-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)

PMLB

Software Authors:   Randal S. Olson, William La Cava, Patryk Orzechowski, Ryan J. Urbanowicz, Jason H. Moore
Cited in: 8 Publications (2018–2022)
Related Software: Scikit; UCI-ml; PySAT; C4.5; GitHub; shap; …
Main Fields: Statistics (62-XX); Computer science (68-XX)

Dopamine

Software Authors:   Pablo Samuel Castro, Subhodeep Moitra, Carles Gelada, Saurabh Kumar, Marc G. Bellemare
Cited in: 2 Publications (2020–2021)
Related Software: OpenAI Gym; RLlib; PyTorch; ChainerRL; Python; Horizon; …
Main Fields: Computer science (68-XX); Game theory, economics, finance, and other social and behavioral sciences (91-XX)

BDD100k

Software Authors:   Yu F., Xian W., Chen Y., Liu F., Liao M., Madhavan V., et al.
Cited in: 2 Publications (2020–2022)
Related Software: Cityscapes; KITTI; ApolloScape; Mapillary Vistas; U-Net; CycleGAN; …
Main Fields: Statistics (62-XX); Computer science (68-XX)

pplacer

Software Authors:   Matsen, F.A., R.B. Kodner, et al.
Cited in: 7 Publications (2002–2022)
Related Software: MLTreeMap; SEPP; TIPP; FastTree; DEPP; PhyloGeoTool; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Computer science (68-XX)

respol

Software Authors:   I.Z.Emiris, V.Fisikopoulos, C.Konaxis, L.Peñaranda
Cited in: 7 Publications (2013–2019)
Related Software: TOPCOM; triangulation; Maple; iB4e; Resultants; Hull; …
Main Fields: Combinatorics (05-XX); Commutative algebra (13-XX); Algebraic geometry (14-XX)

SPECIES

Software Authors:   Wang JP
Cited in: 5 Publications (2013–2021)
Related Software: R; ws2m; EstimateS; SPADE; ade4; vegetarian; …
Main Fields: Statistics (62-XX); Geophysics (86-XX); Biology and other natural sciences (92-XX)

DDLab

Software Authors:   Wuensche, Andrew
Cited in: 5 Publications (2011–2021)
Related Software: ConwayLife; Boids
Main Fields: Dynamical systems and ergodic theory (37-XX); Computer science (68-XX)

fastsimcoal

Software Authors:   Laurent Excoffier, Matthieu Foll
Cited in: 5 Publications (2014–2020)
Related Software: PoMo; momi2; Autograd; GATK; ABCtoolbox; SIMCOAL; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Game theory, economics, finance, and other social and behavioral sciences (91-XX)

HysterSoft

Software Authors:   Dimian, Mihai; Andrei, Petru
Cited in: 6 Publications (2014–2022)
Related Software: GitHub; KronFit
Main Fields: Dynamical systems and ergodic theory (37-XX); Mechanics of particles and systems (70-XX); Statistical mechanics, structure of matter (82-XX)

IT-CEMOP

Software Authors:   Osman, M.S.; Abo-Sinna, Mahmoud A.; Mousa, A.A.
Cited in: 5 Publications (2006–2014)
Related Software: Genocop; WBMOAIS; GENLS; SPEA2; PAES
Main Fields: Numerical analysis (65-XX); Operations research, mathematical programming (90-XX)

MapSplice

Software Authors:   Wang, Darshan Singh, Zheng Zeng, Stephen J. Coleman, Yan Huang,Gleb L. Savich, Xiaping He, Piotr Mieczkowski, Sara A. Grimm, Charles M.Perou, James N. MacLeod, Derek Y. Chiang, Jan F. Prins, Jinze Liu
Cited in: 6 Publications (2016–2019)
Related Software: STAR; RSEM; BWA; Soap; TopHat; R; …
Main Fields: Statistics (62-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)

mothur

Software Authors:   Schloss PD, Westcott SL, Ryabin T, Hall JR, Hartmann M, Hollister EB, Lesniewski RA, Oakley BB, Parks DH, Robinson CJ, Sahl JW, Stres B, Thallinger GG, Van Horn DJ, Weber CF.
Cited in: 4 Publications (2013–2021)
Related Software: pplacer; rtk; iNEXT; vegan; EstimateS; CURSAT; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Numerical analysis (65-XX)

NMEEF-SD

Software Authors:   Carmona, C. J.; González, P.; Del Jesus, M. J.; Herrera, F.
Cited in: 5 Publications (2013–2020)
Related Software: GSA; NICGAR; G3PARM; PeSOA; Rare-PEARs; MODENAR; …
Main Fields: Mathematical logic and foundations (03-XX); Statistics (62-XX); Computer science (68-XX)

SPADE

Software Authors:   Chao A
Cited in: 5 Publications (2007–2018)
Related Software: ws2m; EstimateS; R; SPECIES; DOTUR
Main Fields: Statistics (62-XX); Biology and other natural sciences (92-XX)

TASSEL

Software Authors:   Bradbury, P. J., Zhang, Z., Kroon, D. E., Casstevens, T. M., Ramdoss, Y. and Buckler, E. S.
Cited in: 3 Publications (2012–2017)
Related Software: R; ASReml; GCTA; Bioconductor; GenABEL; IRanges; …
Main Fields: General and overarching topics; collections (00-XX); Statistics (62-XX); Biology and other natural sciences (92-XX)

Wikibase

Software Authors:   Wikidata development team
Cited in: 5 Publications (2013–2018)
Related Software: SPARQL; GeoNames; ProBase; TripleBit; DBpedia; Freebase; …
Main Fields: History and biography (01-XX); Mathematical logic and foundations (03-XX); Algebraic geometry (14-XX)

ads

Software Authors:   Raphaël Pélissier; François Goreaud
Cited in: 3 Publications (2016–2017)
Related Software: R; spatstat; RandomFields; sparr; adehabitat; R-INLA; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Biology and other natural sciences (92-XX)

Arlequin

Software Authors:   Excoffier, L.; Laval, G.; Schneider, S.
Cited in: 5 Publications (2002–2016)
Related Software: PHYLIP; fastsimcoal; SIMCOAL; ForSim; BEAST; simuPOP; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Mechanics of deformable solids (74-XX)

Evigan

Software Authors:   Liu Q1, Mackey AJ, Roos DS, Pereira FC
Cited in: 2 Publications (2011–2015)
Related Software: SURF; Theano; LIBLINEAR; LIBSVM; Matlab; ARACHNE; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Computer science (68-XX)

FairShapley

Software Authors:   Wicke, Kristina; Fischer, Mareike
Cited in: 5 Publications (2017–2020)
Related Software: PERL; bioperl; Mathematica; PhyloNetwork; NetDiversity; Dendroscope; …
Main Fields: Combinatorics (05-XX); Game theory, economics, finance, and other social and behavioral sciences (91-XX); Biology and other natural sciences (92-XX)

fastSTRUCTURE

Software Authors:   Raj A, Stephens M, Pritchard JK
Cited in: 5 Publications (2017–2021)
Related Software: STRUCTURE; R; Frappe; plyr; LBFGS-B; ggplot2; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Biology and other natural sciences (92-XX)

GDK

Software Authors:   Kort, J.; Lämmel, R.; Verhoef, C.
Cited in: 3 Publications (2002–2010)
Related Software: ASF+SDF; GRK; UMLDiff; HaExcel; SableCC; Polyglot; …
Main Fields: Computer science (68-XX)

horserule

Software Authors:   Nalenz, Malte; Villani, Mattias
Cited in: 5 Publications (2018–2021)
Related Software: VBayesLab; BSL; synlik; abcrf; abc; QRM; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX)

RNAfold

Software Authors:   Ivo L Hofacker, Walter Fontana, Sebastian Bonhoeffer, Peter F Stadler, Ronny Lorenz
Cited in: 5 Publications (2012–2019)
Related Software: RNAsubopt; ViennaRNA; PseudoViewer3; RLangGFun; Pfold; NNDB; …
Main Fields: Combinatorics (05-XX); Calculus of variations and optimal control; optimization (49-XX); Probability theory and stochastic processes (60-XX)

BAS

Software Authors:   Robertson, B.L.; Brown, J.A.; Mcdonald, T.; Jaksons, P.
Cited in: 4 Publications (2013–2021)
Related Software: R
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Geophysics (86-XX)

Honey badger algorithm

Software Authors:   Hashim, Fatma A.; Houssein, Essam H.; Hussain, Kashif; Mabrouk, Mai S.; Al-Atabany, Walid
Cited in: 4 Publications (2022)
Related Software: WOA; SSA; ALO; AOA; AHA; GWO; …
Main Fields: Numerical analysis (65-XX); Computer science (68-XX); Operations research, mathematical programming (90-XX)

iRSpot-GAEnsC

Software Authors:   Kabir, M.; Hayat, M.
Cited in: 4 Publications (2016–2019)
Related Software: Pse-in-One; MemHyb; iRSpot-EL; iPreny-PseAAC; iRNA-AI; iCar-PseCp; …
Main Fields: Statistics (62-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)

MagNet

Software Authors:   Dongyu Meng, Hao Chen
Cited in: 3 Publications (2020–2022)
Related Software: Grad-CAM; cleverhans; ImageNet; PyTorch; shap; Advbox; …
Main Fields: Statistics (62-XX); Computer science (68-XX); Game theory, economics, finance, and other social and behavioral sciences (91-XX)

MULINO-DSS

Software Authors:   J. Mysiak, C. Giupponi, A. Fassio
Cited in: 4 Publications (2004–2017)
Related Software: M-MACBETH
Main Fields: Operations research, mathematical programming (90-XX); Game theory, economics, finance, and other social and behavioral sciences (91-XX); Biology and other natural sciences (92-XX)

QFASA

Software Authors:   Sara Iverson; Chris Field; Don Bowen; Wade Blanchard; Connie Stewart; Shelly Lang; Justin Kamerman
Cited in: 4 Publications (2011–2017)
Related Software: Compositional; ElemStatLearn; UCI-ml; bootlib
Main Fields: Statistics (62-XX); Geophysics (86-XX)

RandGA

Software Authors:   Zhang, Chun-Xia; Wang, Guan-Wei; Liu, Jun-Min
Cited in: 4 Publications (2015–2018)
Related Software: PBoostGA; AdaBoost.MH; ElemStatLearn; Bolasso; dobson; UCI-ml; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Computer science (68-XX)

SPL Conqueror

Software Authors:   Siegmund, N., Rosenmüller, M., Kuhlemann, M., Kästner, C., Apel, S., Saake, G.
Cited in: 4 Publications (2016–2021)
Related Software: AlgoWiki; Scalasca; TAU; HPCTOOLKIT; KeY; Java PathFinder; …
Main Fields: Computer science (68-XX); Operations research, mathematical programming (90-XX)

TORC

Software Authors:   Panagiotis E. Hadjidoukas; Evaggelos Lappas; Vassilios V. Dimakopoulos
Cited in: 4 Publications (2014–2022)
Related Software: Pi4U; PSUADE; QUESO; DAKOTA; CMA-ES; NDL; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Computer science (68-XX)

ADZE

Software Authors:   Zachary A. Szpiech, Mattias Jakobsson, Noah A. Rosenberg
Cited in: 2 Publications (2011–2014)
Related Software: iGLASS; FTEC
Main Fields: Computer science (68-XX); Biology and other natural sciences (92-XX)

CityPersons

Software Authors:   Shanshan Zhang, Rodrigo Benenson, Bernt Schiele
Cited in: 2 Publications (2020)
Related Software: ImageNet; KITTI; MobileNets; WoodScape; BDD100k; H3D; …
Main Fields: Computer science (68-XX)

DECOR

Software Authors:   Pal, M.; Saha, S.; Bandyopadhyay, S.
Cited in: 3 Publications (2019–2020)
Related Software: MOEA/D; MOMBI; DMaOEA; HypE; SPEA2; SMS-EMOA; …
Main Fields: Computer science (68-XX); Mechanics of particles and systems (70-XX); Operations research, mathematical programming (90-XX)

DeLiGAN

Software Authors:   Swaminathan Gurumurthy, Ravi Kiran Sarvadevabhatla, Venkatesh Babu Radhakrishnan
Cited in: 3 Publications (2019–2021)
Related Software: Wasserstein GAN; Steerable pyramid; MNIST; darch; torchdiffeq; Glow; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Numerical analysis (65-XX)

DREBIN

Software Authors:   Daniel Arp, Michael Spreitzenbarth, Hugo Gascon, Konrad Rieck
Cited in: 2 Publications (2017)
Related Software: ADAM; Allatori; Monkey; DexProtector; ProGuard; DroidSieve; …
Main Fields: Statistics (62-XX); Computer science (68-XX); Information and communication theory, circuits (94-XX)

FD

Software Authors:   Etienne Laliberté, Bill Shipley
Cited in: 3 Publications (2011–2018)
Related Software: ape; vegan; ade4; R; Picante; spdep; …
Main Fields: Statistics (62-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)

FEMME

Software Authors:   Karline Soetaert; Vanni deClippele; Peter Herman
Cited in: 0 Publications
Related Software: MuMax; Netgen; OOMMF; FastMag; Fidimag; Finmag; …
Main Fields:

GLUE-IT

Software Authors:   Andrew E. Firth; Wayne M. Patrick
Cited in: 2 Publications (2009–2013)
Related Software: PEDEL-AA; PARI/GP; AMPL
Main Fields: Statistics (62-XX); Operations research, mathematical programming (90-XX); Biology and other natural sciences (92-XX)

IGV

Software Authors:   Thorvaldsdóttir H, Robinson JT, Mesirov JP
Cited in: 3 Publications (2016–2018)
Related Software: BEDTools; R; FastQC; Samtools; FIMO; BioMart; …
Main Fields: General and overarching topics; collections (00-XX); Statistics (62-XX); Biology and other natural sciences (92-XX)

iSS-Hyb-mRMR

Software Authors:   Iqbal, M.; Hayat, M.
Cited in: 3 Publications (2016–2018)
Related Software: iPPI-Esml; iRSpot-TNCPseAAC; Pse-in-One; iNuc-PseKNC; 2L-piRNA; iDNA6mA-PseKNC; …
Main Fields: Statistics (62-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)

MDPLIB

Software Authors:   Martí, R., A. Duarte, A. Martínez-Gavara, J. Sánchez-Oro
Cited in: 3 Publications (2021–2022)
Related Software: LOLIB; SYMPHONY; ABACUS; TSPLIB
Main Fields: Operations research, mathematical programming (90-XX); Game theory, economics, finance, and other social and behavioral sciences (91-XX)

NAST

Software Authors:   T. Z. DeSantis, Jr., P. Hugenholtz, K. Keller, E. L. Brodie, N. Larsen, Y. M. Piceno, R. Phan, G. L. Andersen
Cited in: 2 Publications (2013–2015)
Related Software: MrBayes; Gegenees; POY; MLTreeMap; SEPP; GapCoder; …
Main Fields: Computer science (68-XX); Biology and other natural sciences (92-XX)

OpenGA

Software Authors:   Arash Mohammadi; Houshyar Asadi; Shady Mohamed; Kyle Nelson; Saeid Nahavandi
Cited in: 3 Publications (2019–2020)
Related Software: MOEA/D; Krill herd; HypE; SMS-EMOA; SPEA2; NBI
Main Fields: Ordinary differential equations (34-XX); Numerical analysis (65-XX); Computer science (68-XX)

PEDEL-AA

Software Authors:   Andrew E. Firth; Wayne M. Patrick
Cited in: 2 Publications (2009–2013)
Related Software: GLUE-IT; PARI/GP; AMPL
Main Fields: Statistics (62-XX); Operations research, mathematical programming (90-XX); Biology and other natural sciences (92-XX)

PSOFuzzySVM-TMH

Software Authors:   Hayat M, Tahir M.
Cited in: 3 Publications (2015–2019)
Related Software: PseKNC; Pse-in-One; PSNO; iHyd-PseAAC; iUbiq-Lys; 2L-piRNA; …
Main Fields: Computer science (68-XX); Biology and other natural sciences (92-XX)

adapref

Software Authors:   Cappello, Lorenzo; Palacios, Julia A.
Cited in: 2 Publications (2022)
Related Software: Nextstrain; phylodyn; BEAST; GMRFLib; Stan; BEAGLE
Main Fields: Statistics (62-XX)

Alakazam

Software Authors:   Gupta N, Van der Heiden J, Uduman M, Gadala-Maria D, Yaari G, Kleinstein S
Cited in: 2 Publications (2019–2020)
Related Software: Change-O; Ace; DeepTCR; repgenHMM; OLGA; SoDA2; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Biology and other natural sciences (92-XX)

Albumentations

Software Authors:   Alexander Buslaev, Alex Parinov, Eugene Khvedchenya, Vladimir I. Iglovikov, Alexandr A. Kalinin
Cited in: 0 Publications
Related Software: TensorFlow; PyTorch; Python; CFLOW-AD; GANomaly; PyTorch Lightning; …
Main Fields:

Bears

Software Authors:   Fernanda Madeiral, Simon Urli, Marcelo Maia, Martin Monperrus
Cited in: 0 Publications
Related Software: Bugbench; JUnit; GitHub; Travis CI; Maven; Defects4J; …
Main Fields:

CGHpower

Software Authors:   Scheinin, I., J. Ferreira, S. Knuutila, G. Meijer, M. van de Wiel, B. Ylstra
Cited in: 1 Publication (2013)
Related Software: SemiPar; edgeR; Bioconductor; R
Main Fields: Statistics (62-XX); Biology and other natural sciences (92-XX)

Change-O

Software Authors:   Namita T. Gupta; Jason A. Vander Heiden; Mohamed Uduman; Daniel Gadala-Maria; Gur Yaari; Steven H. Kleinstein
Cited in: 2 Publications (2019–2020)
Related Software: Alakazam; Ace; DeepTCR; repgenHMM; OLGA; SoDA2; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Biology and other natural sciences (92-XX)

CheckM

Software Authors:   Parks, DH; Imelfort, M.; Skennerton, CT; Hugenholtz, P.; Tyson, GW
Cited in: 2 Publications (2022)
Related Software: GTDB-Tk; MetaWRAP; MaxBin; MetaBAT; MEGAHIT; CLMB; …
Main Fields: Computer science (68-XX); Biology and other natural sciences (92-XX)

CircleGAN

Software Authors:   Woohyeon Shim, Minsu Cho
Cited in: 1 Publication (2022)
Related Software: Wasserstein GAN; Swin Transformer; CIPS-3D; Caffe; MMGeneration; LOGAN; …
Main Fields: Biology and other natural sciences (92-XX)

Datamonkey

Software Authors:   Weaver, S., S. D. Shank, S. J. Spielman, M. Li, S. V. Muse, S. L. Kosakovsky Pond
Cited in: 1 Publication (2020)
Related Software: HyPhy; Python; phyphy; TTA Lynx; CodonTest; ALF; …
Main Fields: Biology and other natural sciences (92-XX)

dhSegment

Software Authors:   Sofia Ares Oliveira, Benoit Seguin, Frederic Kaplan
Cited in: 1 Publication (2020)
Related Software: CascadeTabNet; Detectron; OLALA; MS-COCO; Tesseract; AllenNLP; …
Main Fields: Computer science (68-XX)

DRIT++

Software Authors:   Hsin-Ying Lee, Hung-Yu Tseng, Qi Mao, Jia-Bin Huang, Yu-Ding Lu, Maneesh Singh, Ming-Hsuan Yang
Cited in: 1 Publication (2020)
Related Software: MMD GAN; TensorFlow; StyleGAN; Adam; HoloGAN; RGBD-GAN; …
Main Fields: Statistics (62-XX); Computer science (68-XX)

FuzzyStatTra

Software Authors:   Asun Lubiano, Sara de la Rosa de Saa
Cited in: 2 Publications (2021)
Related Software: EMOTIVE; FuzzyR; fuzzyreg; frbs; FuzzyNumbers; limSolve; …
Main Fields: Numerical analysis (65-XX); Game theory, economics, finance, and other social and behavioral sciences (91-XX)

HmmUFOtu

Software Authors:   Zheng, Q., Bartow-McKenney, C., Meisel, J.S., Grice, E.A.
Cited in: 2 Publications (2002–2022)
Related Software: DEPP; PhyloGeoTool; INSTRAL; UShER; MLTreeMap; SEPP; …
Main Fields: Computer science (68-XX); Biology and other natural sciences (92-XX)

iHMMune-align

Software Authors:   Gaëta BA, Malming HR, Jackson KJL et al
Cited in: 1 Publication (2017)
Related Software: ViennaRNA; QAPgrid; IgTree; Decombinator; SoDA2; Ab-origin; …
Main Fields: General and overarching topics; collections (00-XX); Biology and other natural sciences (92-XX)

INDUS

Software Authors:   Caragea, Doina; Zhang, Jun; Bao, Jie; Pathak, Jyotishman; Honavar, Vasant
Cited in: 1 Publication (2005)
Related Software:
Main Fields: Computer science (68-XX)

iNEXT

Software Authors:   T. C. Hsieh, K. H. Ma, Anne Chao
Cited in: 1 Publication (2017)
Related Software: EstimateS; rtk; mothur; vegan; CURSAT; Phylomatic; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX)

mCSM

Software Authors:   Douglas E. V. Pires, David B. Ascher, Tom L. Blundell
Cited in: 2 Publications (2016–2020)
Related Software: RINspector; Cytoscape; PlantTFDB; eggNOG; ELM; dbCAN; …
Main Fields: Statistics (62-XX); Biology and other natural sciences (92-XX)

MEDIPS

Software Authors:   Lienhard M, Grimm C, Morkel M, Herwig R, Chavez L
Cited in: 2 Publications (2016–2017)
Related Software: featureCounts; BEDTools; FastQC; Soap; STAR; R; …
Main Fields: Statistics (62-XX); Biology and other natural sciences (92-XX)

MnasNet

Software Authors:   Mingxing Tan, Bo Chen, Ruoming Pang, Vijay Vasudevan, Mark Sandler, Andrew Howard, Quoc V. Le
Cited in: 1 Publication (2021)
Related Software: T2T-ViT; AutoSlim; FBNetV2; MEAL; MobileNetV2; DeepArchitect; …
Main Fields: Statistical mechanics, structure of matter (82-XX)

MuSeQoR

Software Authors:   Reddy, T.Bheemarjuna; Sriram, S.; Manoj, B.S.; Murthy, C.Siva Ram
Cited in: 1 Publication (2006)
Related Software: GloMoSim
Main Fields: Computer science (68-XX)

NetDiversity

Software Authors:   Wicke, Kristina; Fischer, Mareike
Cited in: 2 Publications (2018–2022)
Related Software: PhyloNetwork; PERL; FairShapley; Dendroscope; bioperl
Main Fields: Combinatorics (05-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)

phyloscanner

Software Authors:   Wymant C, Hall M, Ratmann O, Bonsall D, Golubchik T de Cesare M, Gall A, Cornelissen M, Fraser C
Cited in: 2 Publications (2018–2022)
Related Software: BoundedCoalescent; phylodyn; SimPhy; Rcpp; ape; R; …
Main Fields: General and overarching topics; collections (00-XX); Combinatorics (05-XX); Statistics (62-XX)

pRESTO

Software Authors:   Vander Heiden JA, Yaari G, Uduman M et al
Cited in: 2 Publications (2017–2020)
Related Software: SoDA2; Alakazam; Change-O; Ace; DeepTCR; repgenHMM; …
Main Fields: General and overarching topics; collections (00-XX); Biology and other natural sciences (92-XX)

RankSys

Software Authors:   Saúl Vargas
Cited in: 1 Publication (2019)
Related Software: Implicit; RecQ; DaisyRec; RecBole; OpenRec; AutoRec; …
Main Fields: Combinatorics (05-XX); Computer science (68-XX)

REPETITA

Software Authors:   Marsella, L., Sirocco, F., Trovato, A., Seno, F., Tosatto, S.C.
Cited in: 1 Publication (2015)
Related Software:
Main Fields: Biology and other natural sciences (92-XX)

SGNS2

Software Authors:   Lloyd-Price, J., Gupta, A., Ribeiro, A.S.
Cited in: 2 Publications (2014–2019)
Related Software: Dizzy
Main Fields: Biology and other natural sciences (92-XX)

ShoRAH

Software Authors:   Osvaldo Zagordi, Arnab Bhattacharya, Nicholas Eriksson, Niko Beerenwinkel
Cited in: 1 Publication (2022)
Related Software: Gurobi; MultiTrans; Scallop2; SSP; StringTie; RefShannon; …
Main Fields: Operations research, mathematical programming (90-XX); Biology and other natural sciences (92-XX)

SIMCOAL

Software Authors:   Guillaume Laval, Laurent Excoffier
Cited in: 1 Publication (2016)
Related Software: fastsimcoal; ForSim; BEAST; simuPOP; LAMARC; Arlequin; …
Main Fields: Game theory, economics, finance, and other social and behavioral sciences (91-XX); Biology and other natural sciences (92-XX)

SOCKET

Software Authors:   Walshaw, J.; Woolfson, D.N.
Cited in: 2 Publications (2008–2017)
Related Software: InterPreTS; Paircoil2; HIPPIE; STRING; UniProt; MUSCLE; …
Main Fields: Biology and other natural sciences (92-XX)

SpadeR

Software Authors:   Anne Chao , K. H. Ma, T. C. Hsieh, Chun - Huo Chiu
Cited in: 1 Publication (2017)
Related Software: vegan; ade4; R; tabula; Phylomatic; EstimateS; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX)

SPAGEDi

Software Authors:   Olivier Hardy; Xavier Vekemans
Cited in: 2 Publications (2010–2012)
Related Software: spBayes; pyuvdata; INLA; GMRFLib; WinBUGS; spatstat; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX)

STICK

Software Authors:   Lagorce, Xavier; Benosman, Ryad
Cited in: 2 Publications (2015–2018)
Related Software: SpiNNaker
Main Fields: Computer science (68-XX); Biology and other natural sciences (92-XX)

SUNRISE

Software Authors:   Kimin Lee, Michael Laskin, Aravind Srinivas, Pieter Abbeel
Cited in: 1 Publication (2022)
Related Software: CURL; QT-Opt; VIME; OpenAI Gym; Python; TSPred
Main Fields: Computer science (68-XX)