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Found 61 Software Packages (Results 1–61)

EBayesThresh

Software Authors:   Johnstone, Iain M.; Silverman, Bernhard W.
Cited in: 130 Publications (2004–2022)
Related Software: R; EbayesThresh; wavethresh; reccv; glmnet; ElemStatLearn; …
Main Fields: Harmonic analysis on Euclidean spaces (42-XX); Probability theory and stochastic processes (60-XX); Statistics (62-XX)

PROC NLMIXED

Software Authors:   SAS
Cited in: 56 Publications (2001–2022)
Related Software: SAS; SAS/STAT; R; Stata; glimmix; WinBUGS; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Numerical analysis (65-XX)

limma

Software Authors:   Ritchie ME, Phipson B, Wu D, Hu Y, Law CW, Shi W, Smyth GK
Cited in: 48 Publications (2005–2022)
Related Software: Bioconductor; gcrma; R; edgeR; Voom; DEseq; …
Main Fields: Statistics (62-XX); Computer science (68-XX); Operations research, mathematical programming (90-XX)

edgeR

Software Authors:   Mark D. Robinson; Davis J. McCarthy; Gordon K. Smyth
Cited in: 47 Publications (2011–2021)
Related Software: Bioconductor; R; DEseq; BaySeq; Voom; TopHat; …
Main Fields: General and overarching topics; collections (00-XX); Statistics (62-XX); Numerical analysis (65-XX)

spdep

Software Authors:   Roger Bivand, et al
Cited in: 24 Publications (2004–2021)
Related Software: R; Matrix; CRAN; rgdal; GeoDa; splm; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Geophysics (86-XX)

reccv

Software Authors:   Anestis Antoniadis; Jeremie Bigot; Theofanis Sapatinas
Cited in: 36 Publications (2003–2021)
Related Software: WaveLab; EBayesThresh; wmtsa; S+WAVELETS; fda (R); wavethresh; …
Main Fields: Harmonic analysis on Euclidean spaces (42-XX); Probability theory and stochastic processes (60-XX); Statistics (62-XX)

EBarrays

Software Authors:   Michael A. Newton, Christina Kendziorski
Cited in: 31 Publications (2003–2013)
Related Software: R; Bioconductor; SAM; sma; gaga; gcrma; …
Main Fields: General and overarching topics; collections (00-XX); Probability theory and stochastic processes (60-XX); Statistics (62-XX)

multtest

Software Authors:   Katherine S. Pollard, Houston N. Gilbert, Yongchao Ge, Sandra Taylor, Sandrine Dudoit
Cited in: 18 Publications (2004–2019)
Related Software: R; Bioconductor; gcrma; qvalue; vcd; mvtnorm; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Computer science (68-XX)

Voom

Software Authors:   Law, C. W., Chen, Y., Shi, W., Smyth, G. K.
Cited in: 18 Publications (2015–2021)
Related Software: edgeR; Bioconductor; R; limma; DEseq; DESeq2; …
Main Fields: Statistics (62-XX); Biology and other natural sciences (92-XX)

BaySeq

Software Authors:   Thomas J Hardcastle; Krystyna A Kelly
Cited in: 16 Publications (2013–2018)
Related Software: Bioconductor; edgeR; DEseq; R; DESeq2; Voom; …
Main Fields: General and overarching topics; collections (00-XX); Statistics (62-XX); Numerical analysis (65-XX)

EbayesThresh

Software Authors:   Bernard W. Silverman
Cited in: 12 Publications (2004–2021)
Related Software: EBayesThresh; R; wavethresh; Mosek; REBayes; Rmosek; …
Main Fields: Harmonic analysis on Euclidean spaces (42-XX); Statistics (62-XX); Numerical analysis (65-XX)

REBayes

Software Authors:   Roger Koenker, Jiaying Gu, Ivan Mizera
Cited in: 10 Publications (2014–2022)
Related Software: Mosek; R; Rmosek; EbayesThresh; mixsqp; ashr; …
Main Fields: Statistics (62-XX); Computer science (68-XX)

TileMap

Software Authors:   Ji, H. and Wong, W. A.
Cited in: 10 Publications (2006–2012)
Related Software: R; sma; vsn; FindPeaks; ChIPOTle; GENEVESTIGATOR; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Numerical analysis (65-XX)

BAS

Software Authors:   Merlise Clyde, Michael Littman, Quanli Wang, Joyee Ghosh, Yingbo Li
Cited in: 4 Publications (2012–2020)
Related Software: R; JASP; BayesFactor; BMS; MICE; GFortran; …
Main Fields: Statistics (62-XX)

bayesreg

Software Authors:   van Erp, Sara; Oberski, Daniel L.; Mulder, Joris
Cited in: 8 Publications (2019–2022)
Related Software: R; UCI-ml; loo; Stan; BGGM; HDInterval; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Biology and other natural sciences (92-XX)

EBSeq

Software Authors:   Leng N, Dawson JA, Thomson JA, Ruotti V, Rissman AI, Smits BM, Haag JD, Gould MN, Stewart RM, Kendziorski C
Cited in: 8 Publications (2015–2021)
Related Software: edgeR; Bioconductor; DEseq; TopHat; BaySeq; DESeq2; …
Main Fields: General and overarching topics; collections (00-XX); Probability theory and stochastic processes (60-XX); Statistics (62-XX)

smoothfdr

Software Authors:   Wesley Tansey, Oluwasanmi Koyejo, Russell A. Poldrack, James G. Scott
Cited in: 7 Publications (2018–2022)
Related Software: adaptMT; AdaPT; DESeq2; Pvalue Weighting; bootlib; ismev; …
Main Fields: Statistics (62-XX); Operations research, mathematical programming (90-XX)

BMS

Software Authors:   Stefan Zeugner; Martin Feldkircher
Cited in: 2 Publications (2018–2021)
Related Software: R; BMA; BAS; ArviZ; bayestestR; BayesPostEst; …
Main Fields: Statistics (62-XX); Game theory, economics, finance, and other social and behavioral sciences (91-XX); Biology and other natural sciences (92-XX)

geoBayes

Software Authors:   Evangelos Evangelou, Vivekananda Roy
Cited in: 5 Publications (2016–2021)
Related Software: NUTS; Stan; ppls; FRK; RandomFields; GMRFLib; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX)

MIXREG

Software Authors:   Hedeker D, Gibbons RD
Cited in: 4 Publications (2002–2007)
Related Software: MIXOR; MLwiN; PROC NLMIXED; Formula; SAS; MIXREGLS
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Game theory, economics, finance, and other social and behavioral sciences (91-XX)

ebdbNet

Software Authors:   Andrea Rau
Cited in: 4 Publications (2010–2018)
Related Software: R; bnstruct; bnlearn; glmnet; glasso; TETRAD; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Biology and other natural sciences (92-XX)

shrink

Software Authors:   Daniela Dunkler; Willi Sauerbrei; Georg Heinze
Cited in: 2 Publications (2018–2019)
Related Software: glmnet; R; zoo; CODA; RhpcBLASctl; doParallel; …
Main Fields: Statistics (62-XX)

icmm

Software Authors:   Vitara Pungpapong, Min Zhang, Dabao Zhang
Cited in: 2 Publications (2015–2019)
Related Software:
Main Fields: Statistics (62-XX)

JNCC2

Software Authors:   Giorgio Corani; Marco Zaffalon
Cited in: 2 Publications (2010–2012)
Related Software: UCI-ml
Main Fields: Statistics (62-XX); Computer science (68-XX)

MIXREGLS

Software Authors:   Donald Hedeker; Rachel Nordgren
Cited in: 1 Publication (2022)
Related Software: SAS; PROC NLMIXED; Stat-JR; SPSS; SuperMix; MLwiN; …
Main Fields: Statistics (62-XX)

Pomelo II

Software Authors:   Edward R. Morrissey; Ramón Diaz-Uriarte
Cited in: 2 Publications (2010–2013)
Related Software: MetaPCA; AAPL; kerfdr; OrderedList; Bioconductor; R; …
Main Fields: Statistics (62-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)

siggenes

Software Authors:   Holger Schwender
Cited in: 3 Publications (2009–2016)
Related Software:
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Biology and other natural sciences (92-XX)

WebArray

Software Authors:   Xia XQ, McClelland M, Wang Y
Cited in: 0 Publications
Related Software: WebArrayDB; R; rpy2; RPy; RSPython; Bioconductor; …
Main Fields:

ashr

Software Authors:   Matthew Stephens, Peter Carbonetto, Chaoxing Dai, David Gerard, Mengyin Lu, Lei Sun, Jason Willwerscheid, Nan Xiao, Mazon Zeng
Cited in: 0 Publications
Related Software: Mosek; mixsqp; REBayes; R; flashier; Rmosek; …
Main Fields:

CoRF

Software Authors:   Dennis E. te Beest, Steven W. Mes, Saskia M. Wilting, Ruud H. Brakenhoff, Mark A. van de Wiel
Cited in: 1 Publication (2019)
Related Software: gren; glmnet; scam; mgcv; fwelnet; graper; …
Main Fields: Statistics (62-XX)

mixsqp

Software Authors:   Youngseok Kim, Peter Carbonetto, Mihai Anitescu, Matthew Stephens, Jason Willwerscheid, Jean Morrison
Cited in: 0 Publications
Related Software: Mosek; ashr; REBayes; R; flashier; Rmosek; …
Main Fields:

multitest

Software Authors:   Katherine S. Pollard, Houston N. Gilbert, Yongchao Ge, Sandra Taylor, Sandrine Dudoit
Cited in: 2 Publications (2012–2015)
Related Software: gcrma; Bioconductor; multtest
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX)

saa

Software Authors:   Zhao, Sihai Dave
Cited in: 2 Publications (2017–2021)
Related Software: TULIP; ranger; limma; glmnet; Bioconductor; LDAK; …
Main Fields: Statistics (62-XX); Biology and other natural sciences (92-XX)

smashr

Software Authors:   Xing, Zhengrong; Carbonetto, Peter; Stephens, Matthew
Cited in: 2 Publications (2021)
Related Software: EBayesThresh; GitHub; REBayes; shiny; EbayesThresh; Rcpp; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Computer science (68-XX)

bayestable

Software Authors:   Ananyev, M.
Cited in: 0 Publications
Related Software: knitr; RStan; sjPlot; texreg; flextable; xtable; …
Main Fields:

bip-pde-vi

Software Authors:   Povala, Jan; Kazlauskaite, Ieva; Febrianto, Eky; Cirak, Fehmi; Girolami, Mark
Cited in: 1 Publication (2022)
Related Software: PRMLT; statFEM; hIPPYlib; Adam; TensorFlow; BayesDA; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX)

clere

Software Authors:   Loic Yengo, Mickaël Canouil
Cited in: 1 Publication (2018)
Related Software: clusfind; effectFusion; CasANOVA; glasso; Silhouettes
Main Fields: Statistics (62-XX)

CorShrink

Software Authors:   Kushal K. Dey, Matthew Stephens
Cited in: 1 Publication (2020)
Related Software: palasso; TCGAbiolinks; ipflasso; TANDEM; glmnet; SuperLearner; …
Main Fields: Statistics (62-XX)

deconvolveR

Software Authors:   Bradley Efron, Balasubramanian Narasimhan
Cited in: 0 Publications
Related Software: flashier; Rmosek; microbenchmark; Mosek; trust; mixsqp; …
Main Fields:

DoubleExpSeq

Software Authors:   Sean Ruddy
Cited in: 1 Publication (2016)
Related Software: SpliceTrap; rSeqDiff; MOABS; EBSeq; TopHat; DiffSplice; …
Main Fields: Statistics (62-XX); Biology and other natural sciences (92-XX)

ebmstate

Software Authors:   Rui Costa, Moritz Gerstung, et al.
Cited in: 0 Publications
Related Software: penMSM; gamboostMSM; SemiMarkov; msm; mboost; survival; …
Main Fields:

ebnm

Software Authors:   Jason Willwerscheid, Matthew Stephens
Cited in: 0 Publications
Related Software: flashier; Rmosek; microbenchmark; Mosek; trust; deconvolveR; …
Main Fields:

ebreg

Software Authors:   Yiqi Tang, Ryan Martin
Cited in: 1 Publication (2020)
Related Software: horseshoe; selectiveInference; parcor; mixOmics; lars
Main Fields: Computer science (68-XX)

eBsc

Software Authors:   Francisco Rosales, Tatyana Krivobokova, Paulo Serra
Cited in: 1 Publication (2022)
Related Software: scsd; ebsc; gamair; R
Main Fields: Statistics (62-XX)

ecpc

Software Authors:   Mirrelijn M. van Nee, Lodewyk F.A. Wessels, Mark A. van de Wiel
Cited in: 0 Publications
Related Software: gren; CoRF; glmnet; scam; mgcv; fwelnet; …
Main Fields:

flashier

Software Authors:   Willwerscheid, J.
Cited in: 0 Publications
Related Software: Rmosek; microbenchmark; Mosek; trust; deconvolveR; mixsqp; …
Main Fields:

flashr

Software Authors:   Wang, Wei; Stephens, Matthew
Cited in: 1 Publication (2021)
Related Software: MovieLens; GitHub; PMA; denoiseR; EbayesThresh; R
Main Fields: Computer science (68-XX)

GLAD

Software Authors:   Qi (Rose)Yu, Xinran He, Yan Liu
Cited in: 1 Publication (2021)
Related Software: REV2; OddBall; ORCA; SmallK; Enron Email Dataset; outliernmf; …
Main Fields: Operations research, mathematical programming (90-XX)

growthrate

Software Authors:   Sara Lopez-Pintado; Ian W. McKeague
Cited in: 1 Publication (2013)
Related Software:
Main Fields: Statistics (62-XX)

HHSIM

Software Authors:   Ridgeway, G., Paddock, S.M.
Cited in: 1 Publication (2006)
Related Software: WinBUGS
Main Fields: Statistics (62-XX)

HybridMTest

Software Authors:   Pounds, S., Fofana, D.
Cited in: 1 Publication (2021)
Related Software: CARBayes
Main Fields: Statistics (62-XX)

impulseest

Software Authors:   Luan Vinícius Fiorio, Chrystian Lenon Remes, Yales Rômulo de Novaes
Cited in: 0 Publications
Related Software: SciPy; pyvrft; System Identification Toolbox; pyphysio; eadf; R; …
Main Fields:

jointNmix

Software Authors:   Rafael de Andrade Moral; Clarice Garcia Borges Demetrio; John Hinde
Cited in: 1 Publication (2018)
Related Software: R
Main Fields: Statistics (62-XX)

PROC QTL

Software Authors:   Zhiqiu Hu, Shizhong Xu
Cited in: 1 Publication (2013)
Related Software: AS 136; SAS/IML
Main Fields: Statistics (62-XX); Biology and other natural sciences (92-XX)

repfdr

Software Authors:   Heller, R.; Yaacoby, S.; Yekutieli, D.
Cited in: 1 Publication (2017)
Related Software: IndependenceTests; HHG
Main Fields: Statistics (62-XX)

XPEB

Software Authors:   Coram MA, Candille SI, Duan Q, Chan KHK, Li Y, Kooperberg C, Reiner AP, Tang H.
Cited in: 0 Publications
Related Software: GCTA; PLINK; METASOFT; HAPGEN2; R
Main Fields:

zGPS.AO

Software Authors:   Bangyao Zhao, Lili Zhao, Michael Kleinsasser
Cited in: 0 Publications
Related Software: R; CRAN
Main Fields:

FinePop

Software Authors:   Reiichiro Nakamichi, Hirohisa Kishino, Shuichi Kitada
Cited in: 0 Publications
Related Software:
Main Fields:

jocre

Software Authors:   Philip Pallmann
Cited in: 0 Publications
Related Software:
Main Fields:

Mposterior

Software Authors:   Sanvesh Srivastava
Cited in: 0 Publications
Related Software:
Main Fields:

mrMLM

Software Authors:   Wenlong Ren,Yuanli Ni Shibo Wang,Bo Huang, Yuanming Zhang
Cited in: 0 Publications
Related Software:
Main Fields: