×

Found 39 Software Packages (Results 1–39)

Hum-PLoc

Software Authors:   Chou KC, Shen HB
Cited in: 22 Publications (2007–2019)
Related Software: Cell-PLoc; Euk-mPLoc; Euk-PLoc; Hum-mPLoc; Memtype-2L; LIBSVM; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Computer science (68-XX)

SMART

Software Authors:   Letunic, I., Copley, R.R., Schmidt, S., Ciccarelli, F.D., Doerks, T., Schultz, J., Ponting, C.P., Bork, P.
Cited in: 7 Publications (2006–2019)
Related Software: Pfam; UniProt; PROSITE; ClustalW; PSI-BLAST; ELM; …
Main Fields: General and overarching topics; collections (00-XX); Statistics (62-XX); Computer science (68-XX)

BioPortal

Software Authors:   Noy NF, Shah NH, Whetzel PL et al
Cited in: 8 Publications (2016–2020)
Related Software: DBpedia; Pellet; Konclude; Chainsaw; FaCT++; EDAM Browser; …
Main Fields: General and overarching topics; collections (00-XX); Mathematical logic and foundations (03-XX); Statistics (62-XX)

GO-TermFinder

Software Authors:   Boyle, E. I., Weng, S., Gollub, J., Jin, H., Botstein, D., Cherry, J. M., Sherlock, G.
Cited in: 5 Publications (2013–2020)
Related Software: FatiGO; Cytoscape; KEGG; GOstat; iGA; STRING; …
Main Fields: Combinatorics (05-XX); Statistics (62-XX); Computer science (68-XX)

Gpos-PLoc

Software Authors:   Shen, H.B.; Chou, K.C.
Cited in: 11 Publications (2007–2017)
Related Software: Virus-ploc; Hum-PLoc; Hum-mPLoc; Euk-PLoc; Euk-mPLoc; Gneg-mPLoc; …
Main Fields: Statistics (62-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)

AmiGO

Software Authors:   Carbon, S., Ireland, A., Mungall, C. J., Shu, S., Marshall, B., Lewis, S.
Cited in: 5 Publications (2010–2018)
Related Software: KEGG; OBO-Edit; DEOD; PRMLT; SMOTE; MARCH-INSIDE; …
Main Fields: Statistics (62-XX); Computer science (68-XX); Operations research, mathematical programming (90-XX)

Babelomics

Software Authors:   Al-Shahrour, F., Minguez, P., Vaquerizas, J. M., Conde, L., Dopazo, J.
Cited in: 3 Publications (2008–2010)
Related Software: FatiGO; GOstat; Bioconductor; R; KEGG; BicAT; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Biology and other natural sciences (92-XX)

Blast2GO

Software Authors:   Conesa, A., Götz, S., García-Gómez, J.M., Terol, J., Talón, M., Robles, M.
Cited in: 2 Publications (2019–2020)
Related Software: DAVID; Pfam; KEGG; MODELLER; InterProScan; I-TASSER; …
Main Fields: General and overarching topics; collections (00-XX); Operations research, mathematical programming (90-XX); Biology and other natural sciences (92-XX)

GOASVM

Software Authors:   Wan, S., Mak, M.W., Kung, S.Y.
Cited in: 6 Publications (2013–2018)
Related Software: Cell-PLoc; iLoc-Gpos; iRSpot-PseDNC; Euk-mPLoc; Plant-mPLoc; iLoc-Hum; …
Main Fields: Statistics (62-XX); Biology and other natural sciences (92-XX)

GOSim

Software Authors:   Holger Fröhlich
Cited in: 4 Publications (2011–2017)
Related Software: TRANSFAC; ClustalW; SeqVis; iGTP; TOPAL; ExaBayes; …
Main Fields: General and overarching topics; collections (00-XX); Statistics (62-XX); Numerical analysis (65-XX)

GOtcha

Software Authors:   Martin, D.M., Berriman, M., Barton, G.J.
Cited in: 3 Publications (2007–2008)
Related Software: GOPET; BayGO; Gaggle; GOLEM; BiNGO; ProbCD; …
Main Fields: Statistics (62-XX); Biology and other natural sciences (92-XX)

ProbCD

Software Authors:   Ricardo Vêncio, Ilya Shmulevich
Cited in: 0 Publications
Related Software: R; GOPET; BayGO; Gaggle; GOLEM; GOtcha; …
Main Fields:

QuickGO

Software Authors:   Binns, D.; Dimmer, E.; Huntley, R.; Barrell, D.; O'Donovan, C.; Apweiler, R.
Cited in: 4 Publications (2012–2015)
Related Software: Cell-PLoc; GOASVM; Euk-mPLoc; EpiLoc; YLoc; iNitro-Tyr; …
Main Fields: Statistics (62-XX); Biology and other natural sciences (92-XX)

GOLEM

Software Authors:   R.S.G. Sealfon, M.A. Hibbs, C. Huttenhower, C.L. Myers, O.G. Troyanskaya
Cited in: 1 Publication (2013)
Related Software: BiNGO; GOPET; BayGO; Gaggle; GOtcha; ProbCD; …
Main Fields: Biology and other natural sciences (92-XX)

INMEX

Software Authors:   Xia, J., C.D. Fjell, et al.
Cited in: 2 Publications (2018)
Related Software: R; shiny; limma; edgeR; ExAtlas; ScanGEO; …
Main Fields: Statistics (62-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)

COFACTOR

Software Authors:   Roy, A.; Yang, Jianyi; Zhang, Y.
Cited in: 3 Publications (2011–2022)
Related Software: I-TASSER; Tensor2Tensor; DeepGOPlus; DeepGO; QAUST; ProTranslator; …
Main Fields: Fluid mechanics (76-XX); Biology and other natural sciences (92-XX)

DeepGO

Software Authors:   Maxat Kulmanov, Mohammed Asif Khan, Robert Hoehndorf
Cited in: 3 Publications (2021–2022)
Related Software: NetGO; Tensor2Tensor; COFACTOR; DeepGOPlus; QAUST; ProTranslator; …
Main Fields: Computer science (68-XX); Biology and other natural sciences (92-XX)

ConFunc

Software Authors:   Mark N. Wass, Michael J. E. Sternberg
Cited in: 1 Publication (2010)
Related Software: ConSeq; MAMMOTH; PSLpred; iTOL; TM-align; BLAST; …
Main Fields: Biology and other natural sciences (92-XX)

DOSE

Software Authors:   Yu G, Wang L, Yan G, He Q
Cited in: 1 Publication (2016)
Related Software: GOSemSim; DisSetSim; clusterProfiler; MeSHSim; DaGO-Fun; DOSim; …
Main Fields: Statistics (62-XX); Biology and other natural sciences (92-XX)

DOSim

Software Authors:   Li, Jiang; Gong, Bingsheng; Chen, Xi; Liu, Tao; Wu, Chao; Zhang, Fan; Li, Chunquan; Li, Xiang; Rao, Shaoqi; Li, Xia
Cited in: 0 Publications
Related Software: DisSetSim; clusterProfiler; GOSemSim; MeSHSim; DOSE; DaGO-Fun; …
Main Fields:

GO.db

Software Authors:   M. Carlson
Cited in: 1 Publication (2022)
Related Software: rTANDEM; reactome.db; Reactome; rols; hpar; Rcpp; …
Main Fields: Statistics (62-XX)

GoFigure

Software Authors:   Khan, S.; Situ, G.; Decker, K.; Schmidt, C. J.
Cited in: 2 Publications (2008–2016)
Related Software:
Main Fields: Statistics (62-XX); Biology and other natural sciences (92-XX)

GOPET

Software Authors:   A. Vinayagam, C. del Val, F. Schubert, R. Eils, K.H. Glatting, S. Suhai, R. König
Cited in: 0 Publications
Related Software: BayGO; Gaggle; GOLEM; GOtcha; BiNGO; ProbCD; …
Main Fields:

GOurmet

Software Authors:   Doherty, J.M.; Carmichael, L.K.; Mills, J.C.
Cited in: 1 Publication (2010)
Related Software: GOALIE; STEM; GOstat; MCODE
Main Fields: Statistics (62-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)

GraphWeb

Software Authors:   J. Reimand, L. Tooming, H. Peterson, P. Adler, J. Vilo
Cited in: 1 Publication (2010)
Related Software: g Profiler; KEGGanim
Main Fields: Biology and other natural sciences (92-XX)

NetGO

Software Authors:   You, R.; Yao, S.; Xiong, Y.; Huang, X.; Sun, F.; Mamitsuka, H.
Cited in: 2 Publications (2022)
Related Software: DeepGO; Tensor2Tensor; COFACTOR; DeepGOPlus; QAUST; ProTranslator; …
Main Fields: Computer science (68-XX); Biology and other natural sciences (92-XX)

ORegAnno

Software Authors:   Obi L. Griffith, Stephen B. Montgomery, Bridget Bernier, et.al.
Cited in: 1 Publication (2016)
Related Software: UniPROBE; InteroPORC; JASPAR; rVISTA; BIPS; modMine; …
Main Fields: Computer science (68-XX); Biology and other natural sciences (92-XX)

R3P-Loc

Software Authors:   Wan, Shibiao; Mak, Man-Wai; Kung, Sun-Yuan
Cited in: 2 Publications (2014–2018)
Related Software: UCI-ml; OpenML; OP-ELM; Signal-CF; iEzy-drug; EpiLoc; …
Main Fields: Computer science (68-XX); Biology and other natural sciences (92-XX)

Transcriptator

Software Authors:   Tripathi, KP; Evangelista, D; Zuccaro, A; Guarracino, MR
Cited in: 2 Publications (2017–2020)
Related Software: intdag; MIM; KEGG; TETRAD; MISSEL; FastAnnotator; …
Main Fields: Combinatorics (05-XX); Statistics (62-XX); Operations research, mathematical programming (90-XX)

DaGO-Fun

Software Authors:   Mazandu G.K., Mulder N.J.
Cited in: 0 Publications
Related Software: DisSetSim; clusterProfiler; GOSemSim; MeSHSim; DOSE; DOSim; …
Main Fields:

GeneAround

Software Authors:   Tanoue, Junko; Matoba, Noboru; Yoshikawa, Masatoshi; Uemura, Shunsuke
Cited in: 1 Publication (2002)
Related Software:
Main Fields: Computer science (68-XX); Biology and other natural sciences (92-XX)

GeneLibrarian

Software Authors:   Chiang JH, Shin JW, Liu HH, Chin CL
Cited in: 0 Publications
Related Software: KEGG; Bioconductor
Main Fields:

IntelliGO

Software Authors:   Sidahmed Benabderrahmane, Malika Smail-Tabbone, Olivier Poch, Amedeo Napoli, Marie-Dominique Devignes
Cited in: 1 Publication (2016)
Related Software: FUNC; Aber-OWL; Ontobee; PlantTFDB; eggNOG; ELM; …
Main Fields: Statistics (62-XX); Biology and other natural sciences (92-XX)

PlasmoDraft

Software Authors:   Laurent Bréhélin, Jean-François Dufayard, Olivier Gascuel
Cited in: 1 Publication (2009)
Related Software: BNT; IntAct; InterProScan; BLAST
Main Fields: Computer science (68-XX); Biology and other natural sciences (92-XX)

QAUST

Software Authors:   Zohra Smaili, F., Tian, S., Roy, A., Alazmi, M., Arold, S.T., Mukherjee, S., et al.
Cited in: 1 Publication (2022)
Related Software: Tensor2Tensor; COFACTOR; DeepGOPlus; DeepGO; ProTranslator; GOLabeler; …
Main Fields: Biology and other natural sciences (92-XX)

TabSQL

Software Authors:   Xia, Xiaoqin; Mcclelland, Michael; Wang, Yipeng
Cited in: 0 Publications
Related Software: WebArrayDB; WebArray; MySQL
Main Fields:

tagtog

Software Authors:   Cejuela, J. M., McQuilton, P., Ponting, L., Marygold, S. J., Stefancsik, R., Millburn, G. H., Rost, B., et al
Cited in: 0 Publications
Related Software: Beautiful Soup; Scikit; StanfordCoreNLP; spaCy; Python; Jabberwocky
Main Fields:

GOParGenPy

Software Authors:   Ajay Anand Kumar; Liisa Holm; Petri Toronen
Cited in: 0 Publications
Related Software:
Main Fields:

XGR

Software Authors:   Hai Fang, Bogdan Knezevic, Katie L Burnham, Julian C Knight
Cited in: 0 Publications
Related Software:
Main Fields: