TRANSFAC Software Authors: E. Wingender, X. Chen, R. Hehl, H. Karas, I. Liebich, V. Matys, T. Meinhardt, M. Prüß, I. Reuter, F. Schacherer Cited in: 34 Publications (2001–2020) Related Software: JASPAR; KEGG; BioProspector; WebLogo; Cytoscape; UniProt; … Main Fields: Combinatorics (05-XX); Probability theory and stochastic processes (60-XX); Statistics (62-XX)
MEGAN Software Authors: Daniel H. Huson, Alexander F. Auch, Ji Qi, Stephan C. Schuster Cited in: 5 Publications (2010–2017) Related Software: TETRA; TACOA; BLAST; ONE; RAST; PSI-BLAST; … Main Fields: Combinatorics (05-XX); Statistics (62-XX); Computer science (68-XX)
SMART Software Authors: Letunic, I., Copley, R.R., Schmidt, S., Ciccarelli, F.D., Doerks, T., Schultz, J., Ponting, C.P., Bork, P. Cited in: 7 Publications (2006–2019) Related Software: Pfam; UniProt; PROSITE; ClustalW; PSI-BLAST; ELM; … Main Fields: General and overarching topics; collections (00-XX); Statistics (62-XX); Computer science (68-XX)
Galaxy Software Authors: Belinda Giardine, Cathy Riemer, Ross C. Hardison, Richard Burhans, Laura Elnitski, Prachi Shah, Yi Zhang, Daniel Blankenberg, Istvan Albert, James Taylor, Webb Miller, W. James Kent, Anton Nekrutenko Cited in: 7 Publications (2009–2018) Related Software: R; Bioconductor; TopHat; edgeR; STAR; BLAT; … Main Fields: Partial differential equations (35-XX); Statistics (62-XX); Computer science (68-XX)
BiGG Software Authors: J. Schellenberger, J.O. Park, T.M. Conrad, B.O. Palsson Cited in: 9 Publications (2011–2020) Related Software: KEGG; efmtool; Metatool; R; DIAMOnD; COBRA Toolbox; … Main Fields: Ordinary differential equations (34-XX); Numerical analysis (65-XX); Computer science (68-XX)
d2_cluster Software Authors: Burke, J., Davison, D., Hide, W. Cited in: 5 Publications (2007–2019) Related Software: MOLPHY; PHYLIP; Rainbow; SlideSort; Mash; Corset; … Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Computer science (68-XX)
ExonHunter Software Authors: Brejová, B.; Brown, D. G.; Li, M.; Vinař, T. Cited in: 3 Publications (2007–2008) Related Software: ESTScan; GlimmerHMM; TigrScan; EasyGene; Pfam; SMART; … Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Computer science (68-XX)
PlantTFDB Software Authors: Jin J, Tian F, Yang DC, Meng YQ, Kong L, Luo J, Gao G Cited in: 2 Publications (2016–2019) Related Software: R; NOMAD; GeneNetWeaver; Path2Models; SOSlib; LASSIE; … Main Fields: Statistics (62-XX); Biology and other natural sciences (92-XX)
ASPIC Software Authors: Bonizzoni P, Rizzi R, Pesole G Cited in: 1 Publication (2015) Related Software: ASTALAVISTA; Exogean; EMBOSS; Minimus; EMIRGE; ViennaRNA; … Main Fields: General and overarching topics; collections (00-XX); Biology and other natural sciences (92-XX)
CellMiner Software Authors: Reinhold WC, Sunshine M, Liu H, Varma S, Kohn KW, Morris J, Doroshow J, Pommier Y Cited in: 1 Publication (2016) Related Software: R; pense; robustHD; enetLTS; glmnet; rrcov; … Main Fields: Statistics (62-XX); Biology and other natural sciences (92-XX)
FORESST Software Authors: Di Francesco V, Munson PJ, Garnier J. Cited in: 2 Publications (2006–2009) Related Software: DINAMelt; Hum-PLoc; Signal-CF; ToMoCoMD-CARDD; Cell-PLoc; STATISTICA; … Main Fields: Probability theory and stochastic processes (60-XX); Biology and other natural sciences (92-XX)
PyCogent Software Authors: Knight R, Maxwell P, Birmingham A, Carnes J, Caporaso JG, Easton BC, et al. Cited in: 1 Publication (2014) Related Software: Python; bioperl; PyMOL; Biopython; Omics Pipe; Anaconda; … Main Fields: Statistics (62-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)
BClass Software Authors: Arturo Medrano-Soto; J. Andres Christen; Julio Collado-vides Cited in: 1 Publication (2021) Related Software: AutoClass; LISP-STAT; PyMix Main Fields: Statistics (62-XX)
BLAST++ Software Authors: B.C. Ooi, H. Wang, T. Ong, K. Tan Cited in: 2 Publications (2006–2010) Related Software: BLAST; PackageBLAST; GridBlast; mpiBLAST; Globus Toolkit; Gbtk; … Main Fields: Computer science (68-XX); Biology and other natural sciences (92-XX)
MEDIPS Software Authors: Lienhard M, Grimm C, Morkel M, Herwig R, Chavez L Cited in: 2 Publications (2016–2017) Related Software: featureCounts; BEDTools; FastQC; Soap; STAR; R; … Main Fields: Statistics (62-XX); Biology and other natural sciences (92-XX)
PolyA_DB Software Authors: Zhang H, Hu J, Recce M, Tian B Cited in: 1 Publication (2015) Related Software: EMBOSS; Minimus; EMIRGE; ViennaRNA; TagCleaner; OligoWalk; … Main Fields: General and overarching topics; collections (00-XX); Biology and other natural sciences (92-XX)
QGRS mapper Software Authors: Kikin, O.; D’Antonio, L.; Bagga, P. S. Cited in: 1 Publication (2019) Related Software: Quadfinder; QGRS-H Predictor; pqsfinder; G4Hunter; G4Catchall; GitHub Main Fields: Statistics (62-XX); Biology and other natural sciences (92-XX)
RSS Software Authors: Zhu, Xiang; Stephens, Matthew Cited in: 2 Publications (2017–2019) Related Software: GitHub Main Fields: Statistics (62-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)
Bioinformatics Toolbox Software Authors: mathworks Cited in: 0 Publications Related Software: panp; RcppGSL; Ox; Affymetrix; Matlab; Bioconductor; … Main Fields: –
ddbRNA Software Authors: di Bernardo D., Down T., Hubbard T. Cited in: 1 Publication (2008) Related Software: MARNA; PSoL; ProMiR II; Sfold; RNAKinetics; RSEARCH; … Main Fields: Biology and other natural sciences (92-XX)
FSDB Software Authors: Sanghoon Moon, Yanga Byun, Kyungsook Han Cited in: 1 Publication (2007) Related Software: ARFA; PseudoViewer3 Main Fields: Biology and other natural sciences (92-XX)
FX Software Authors: D. Hong, A. Rhie, S.-S. Park et al. Cited in: 1 Publication (2013) Related Software: Crossbow; Probalign; k-means++; Jnomics; T-coffee; Kalign; … Main Fields: Biology and other natural sciences (92-XX)
GARSA Software Authors: Davila, A.M., Lorenzini, D.M., Mendes, P.N., et al Cited in: 1 Publication (2007) Related Software: EMBOSS; SMART; DAMBE; AMADA; YACOP; GOtcha; … Main Fields: Biology and other natural sciences (92-XX)
GeneHug-GEPIS Software Authors: Zhang Y, Luoh S-M, Hon LS, Baertsch R, Wood WI, Zhang Z Cited in: 1 Publication (2016) Related Software: Galaxy; ROAST; featureCounts; Rsubread; recount; PROPER; … Main Fields: Statistics (62-XX); Biology and other natural sciences (92-XX)
Kinship-Privacy Software Authors: Gulce Kale; Erman Ayday; Oznur Tastan Cited in: 1 Publication (2019) Related Software: geno2pheno; HElib Main Fields: Computer science (68-XX); Biology and other natural sciences (92-XX)
LOLA Software Authors: Sheffield, N. C., C. Bock Cited in: 0 Publications Related Software: batchtools; R; simpleCache Main Fields: –
MAExplorer Software Authors: Peter F. Lemkin, Gregory C. Thornwall, Jai Evans Cited in: 1 Publication (2003) Related Software: S-PLUS; marrayInput; ellipse; POE; GeneClust; MAANOVA; … Main Fields: General and overarching topics; collections (00-XX); Statistics (62-XX); Biology and other natural sciences (92-XX)
MetaOmics Software Authors: Wang, X., Kang, D. D., Shen, K., Song, C., Lu, S., Chang, L. C., Liao, S. G., Huo, Z., Tang, S., Kaminski, N. et al. Cited in: 1 Publication (2014) Related Software: – Main Fields: Statistics (62-XX)
PGTools Software Authors: Nagaraj, S. H.; Waddell, N.; Madugundu, A. K.; Wood, S.; Jones, A.; Mandyam, R. A.; Nones, K.; Pearson, J. V.; Grimmond, S. M. Cited in: 0 Publications Related Software: GeneScout; iPiG; KNIME; MyriMatch; Peppy; PGx; … Main Fields: –
ReactomeFIViz Software Authors: Wu, G.; Dawson, E.; Duong, A.; Haw, R.; Stein, L. Cited in: 1 Publication (2018) Related Software: Clingo Main Fields: Biology and other natural sciences (92-XX)
RepeatExplorer Software Authors: Novák, P., Neumann, P., Pech, J., Steinhaisl, J., Macas, J. Cited in: 1 Publication (2016) Related Software: Red; PRAP Main Fields: Combinatorics (05-XX); Biology and other natural sciences (92-XX)
TRONCO Software Authors: Luca De Sano, Giulio Caravagna, Daniele Ramazzotti, Alex Graudenzi, Giancarlo Mauri, Bud Mishra, Marco Antoniotti Cited in: 0 Publications Related Software: Bioconductor Main Fields: –
Vespucci Software Authors: Allison KA, Kaikkonen MU, Gaasterland T, Glass CK Cited in: 1 Publication (2017) Related Software: FStitch Main Fields: Statistics (62-XX); Biology and other natural sciences (92-XX)
biomartr Software Authors: Hajk-Georg Drost Cited in: 0 Publications Related Software: – Main Fields: –