COSA Software Authors: Friedman, Jerome H.; Meulman, Jacqueline J. Cited in: 52 Publications (2003–2023) Related Software: UCI-ml; R; sparcl; mclust; clusfind; Silhouettes; … Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Computer science (68-XX)
edgeR Software Authors: Mark D. Robinson; Davis J. McCarthy; Gordon K. Smyth Cited in: 48 Publications (2011–2021) Related Software: Bioconductor; R; DEseq; Voom; BaySeq; TopHat; … Main Fields: General and overarching topics; collections (00-XX); Statistics (62-XX); Numerical analysis (65-XX)
ArrayExpress Software Authors: EMBL-EBI; Parkinson, Helen E.; Kapushesky, Misha; Shojatalab, Mohammadreza; Abeygunawardena, Niran; Coulson, R.; Farne, Anna; Holloway, Ele; Kolesnykov, N.; Lilja, P.; Lukk, M.; Mani, R.; Rayner, Tim; Sharma, Anjan; William, E.; Sarkans, Ugis; Brazma, Alvis Cited in: 13 Publications (2007–2019) Related Software: Bioconductor; R; gcrma; KEGG; affy; TM4; … Main Fields: Combinatorics (05-XX); Statistics (62-XX); Computer science (68-XX)
Pse-in-One Software Authors: Liu, B.; Liu, F.; Wang, X.; Chen, J.; Fang, L.; Chou, K. -C.: Cited in: 42 Publications (2015–2021) Related Software: iRSpot-PseDNC; PseKNC; iPro54-PseKNC; pLoc-mEuk; iRNA-PseColl; pLoc-mAnimal; … Main Fields: Statistics (62-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)
SSS Software Authors: Hans, Chris; Dobra, Adrian; West, Mike Cited in: 39 Publications (2007–2022) Related Software: EMVS; glmnet; BayesDA; EBayesThresh; glasso; R; … Main Fields: General and overarching topics; collections (00-XX); Statistics (62-XX); Numerical analysis (65-XX)
PatternHunter Software Authors: Ma, B., Tromp, J., Li, M. Cited in: 29 Publications (2004–2020) Related Software: SHRiMP; BLAT; MUMMER; LAGAN; Soap; BLASTZ; … Main Fields: General and overarching topics; collections (00-XX); Combinatorics (05-XX); Statistics (62-XX)
PseKNC Software Authors: Chen, W.; Lei, T. -Y.; Jin, D. -C.; Lin, H.; Chou, K. -C. Cited in: 31 Publications (2015–2019) Related Software: iRSpot-PseDNC; Pse-in-One; pLoc-mAnimal; iPTM-mLys; iNuc-PseKNC; pLoc-mPlant; … Main Fields: Statistics (62-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)
LAGAN Software Authors: M. Brudno, C.B. Do, G.M. Cooper, M.F. Kim, E. Davydov, E.D. Green, A. Sidow, S. Batzoglou Cited in: 11 Publications (2005–2019) Related Software: MUMMER; BLASTZ; PatternHunter; BLAT; MUSCLE; ClustalW; … Main Fields: General and overarching topics; collections (00-XX); Combinatorics (05-XX); Computer science (68-XX)
CellProfiler Software Authors: Anne E Carpenter, Thouis R Jones, Michael R Lamprecht, Colin Clarke, In Han Kang, Ola Friman, David A Guertin, Joo Han Chang, Robert A Lindquist, Jason Moffat, Polina Golland, David M Sabatini Cited in: 5 Publications (2018–2020) Related Software: ImageJ; ImageJ2; Fiji; ImgLib2; scikit-image; ilastik; … Main Fields: Algebraic topology (55-XX); Statistics (62-XX); Computer science (68-XX)
pymatgen Software Authors: Ong, S. P.; Richards, W. D.; Jain, A.; Hautier, G.; Kocher, M.; Cholia, S.; Gunter, D.; Chevrier, V. L.; Persson, K. A.; Ceder, G. Cited in: 3 Publications (2017–2022) Related Software: Python; ASE; Matplotlib; SciPy; Spglib; NumPy; … Main Fields: Group theory and generalizations (20-XX); Convex and discrete geometry (52-XX); Manifolds and cell complexes (57-XX)
SPAdes Software Authors: Anton Bankevich, Sergey Nurk, Dmitry Antipov, Alexey A. Gurevich, Mikhail Dvorkin, Alexander S. Kulikov, Valery M. Lesin, Sergey I. Nikolenko, Son Pham, Andrey D. Prjibelski, Alexey V. Pyshkin, Alexander V. Sirotkin, Nikolay Vyahhi, Glenn Tesler, Max A. Alekseyev, Pavel A. Pevzner Cited in: 17 Publications (2015–2022) Related Software: Velvet; IDBA-UD; IDBA; ABySS; GAGE; MEGAHIT; … Main Fields: Combinatorics (05-XX); Statistics (62-XX); Computer science (68-XX)
OrthoMCL Software Authors: Li, L., Stoeckert, C.J., Roos, D. Cited in: 8 Publications (2006–2020) Related Software: MSOAR; PSI-BLAST; BLAST; eggNOG; Proteinortho; PHYLIP; … Main Fields: General and overarching topics; collections (00-XX); Combinatorics (05-XX); Statistics (62-XX)
Kalign Software Authors: T. Lassmann, O. Frings, E. Sonnhammer Cited in: 11 Publications (2011–2019) Related Software: MUSCLE; ClustalW; T-coffee; MAFFT; ProbCons; Balibase; … Main Fields: General and overarching topics; collections (00-XX); Probability theory and stochastic processes (60-XX); Statistics (62-XX)
ForceAtlas2 Software Authors: Jacomy, M.; Venturini, T.; Heymann, S.; Bastian, M. Cited in: 12 Publications (2017–2022) Related Software: Gephi; GitHub; Supracentrality; CHAMP; GenLouvain; UMAP; … Main Fields: Combinatorics (05-XX); Computer science (68-XX); Operations research, mathematical programming (90-XX)
GenABEL Software Authors: Aulchenko, Y. S., Ripke, S., Isaacs, A.; van Duijn, C. M Cited in: 6 Publications (2013–2017) Related Software: R; ProbABEL; Bioconductor; PLINK; igraph; Postgwas; … Main Fields: General and overarching topics; collections (00-XX); Statistics (62-XX); Numerical analysis (65-XX)
GeneMANIA Software Authors: Mostafavi, S., Ray, D., Warde-Farley, D., Grouios, C., Morris, Q. Cited in: 9 Publications (2012–2021) Related Software: Cytoscape; STRING; BioGRID; SHOGUN; BLAST; PSI-BLAST; … Main Fields: Combinatorics (05-XX); Statistics (62-XX); Computer science (68-XX)
TETRA Software Authors: Teeling H, Waldmann J, Lombardot T, Bauer M, Glöckner FO Cited in: 2 Publications (2011–2020) Related Software: MEGAN; TACOA; BLAST; PSI-BLAST; DOTUR; Pfam; … Main Fields: Statistics (62-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)
ABCtoolbox Software Authors: Daniel Wegmann, Christoph Leuenberger, Samuel Neuenschwander, Laurent Excoffier Cited in: 7 Publications (2012–2020) Related Software: abctools; PopABC; abc; REJECTOR; msBayes; Serial SimCoal; … Main Fields: Ordinary differential equations (34-XX); Dynamical systems and ergodic theory (37-XX); Statistics (62-XX)
BEDTools Software Authors: Quinlan AR, Hall IM Cited in: 7 Publications (2012–2019) Related Software: R; Soap; IGV; FastQC; Samtools; edgeR; … Main Fields: General and overarching topics; collections (00-XX); Statistics (62-XX); Computer science (68-XX)
GEOquery Software Authors: Sean D, Meltzer PS Cited in: 7 Publications (2016–2022) Related Software: R; Bioconductor; shiny; WEKA; AdaPT; adaptMT; … Main Fields: General and overarching topics; collections (00-XX); Statistics (62-XX); Computer science (68-XX)
MAMMOTH Software Authors: Ortiz, A.R.; Strauss, C.E.M.; Olmea, O. Cited in: 8 Publications (2008–2017) Related Software: TM-align; BLAST; PSI-BLAST; DIAL; Qhull; ConSeq; … Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Computer science (68-XX)
qvalue Software Authors: John D. Storey, Andrew J. Bass, Alan Dabney, David Robinson Cited in: 9 Publications (2008–2022) Related Software: R; multtest; GitHub; DeepPINK; fdrtool; Phyloseq; … Main Fields: Harmonic analysis on Euclidean spaces (42-XX); Statistics (62-XX); Operations research, mathematical programming (90-XX)
PathBLAST Software Authors: Kelley, B. P., Yuan, B., Lewitter, F., Sharan, R., Stockwell, B. R., Ideker T Cited in: 6 Publications (2011–2015) Related Software: KEGG; BLAST; PSI-BLAST; ClustalW; MAVisto; FANMOD; … Main Fields: General and overarching topics; collections (00-XX); Combinatorics (05-XX); Computer science (68-XX)
plsgenomics Software Authors: Boulesteix AL, Lambert-Lacroix S, Peyre J, Strimmer K Cited in: 8 Publications (2013–2022) Related Software: R; mclust; glmnet; MASS (R); rrcov; ROBPCA; … Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Computer science (68-XX)
cmenet Software Authors: Simon Mak, C. F. Jeff Wu Cited in: 7 Publications (2018–2020) Related Software: sparsenet; R; L0Learn; foba; rcdk; ElemStatLearn; … Main Fields: Combinatorics (05-XX); Probability theory and stochastic processes (60-XX); Statistics (62-XX)
varSelRF Software Authors: Ramon Diaz-Uriarte Cited in: 2 Publications (2009) Related Software: R; GeneSrF; randomForest; Boruta; FSelector; mlbench; … Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Computer science (68-XX)
FindPeaks Software Authors: Fejes AP, Robertson G, Bilenky M, et al. Cited in: 3 Publications (2012–2013) Related Software: BayesPeak; KEGG; DEGseq; edgeR; R; TileMap; … Main Fields: General and overarching topics; collections (00-XX); Statistics (62-XX); Biology and other natural sciences (92-XX)
GlobPlot Software Authors: Rune Linding, Robert B. Russell, Victor Neduva and Toby J. Gibson Cited in: 4 Publications (2008–2019) Related Software: IUPred; RONN; FoldIndex; FoldUnfold; DISOPRED; ELM; … Main Fields: Mathematical logic and foundations (03-XX); Statistics (62-XX); Biology and other natural sciences (92-XX)
MSOAR Software Authors: Fu, Z., Chen, X., Vacic, V., Nan, P., Zhong, Y., Jiang, T.; Shi, G., Zhang, L. Cited in: 4 Publications (2013–2020) Related Software: OrthoMCL; GASTS; MrBayes; BIONJ; PHYLIP; PSI-BLAST; … Main Fields: General and overarching topics; collections (00-XX); Combinatorics (05-XX); Computer science (68-XX)
Blast2GO Software Authors: Conesa, A., Götz, S., García-Gómez, J.M., Terol, J., Talón, M., Robles, M. Cited in: 2 Publications (2019–2020) Related Software: DAVID; Pfam; KEGG; MODELLER; InterProScan; I-TASSER; … Main Fields: General and overarching topics; collections (00-XX); Operations research, mathematical programming (90-XX); Biology and other natural sciences (92-XX)
CloudBurst Software Authors: Michael C. Schatz Cited in: 2 Publications (2013–2018) Related Software: Soap; MrsRF; MapReduce; BWA; ZOOM; Crossbow; … Main Fields: Computer science (68-XX); Biology and other natural sciences (92-XX)
Expression Profiler Software Authors: Jaak Vilo, Misha Kapushesky, Patrick Kemmeren, Ugis Sarkans, Alvis Brazma Cited in: 1 Publication (2003) Related Software: Bioconductor; Taverna; R; Matlab; Globus Toolkit; ASKALON; … Main Fields: General and overarching topics; collections (00-XX); Statistics (62-XX); Biology and other natural sciences (92-XX)
iBAG Software Authors: Wang, W., Baladandayuthapani, V., Morris, J. S., Broom, B. M., Manyam, G. Do, K.-A. Cited in: 6 Publications (2015–2021) Related Software: TCGA-assembler; PenPC; XMRF; glasso; GISTIC2.0; GTM; … Main Fields: Statistics (62-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)
PLASQ Software Authors: Laframboise, Thomas; Harrington, David; Weir, Barbara A. Cited in: 5 Publications (2007–2011) Related Software: CARAT; R; PICNIC; BRLMM; oligo; GenoSNP; … Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Computer science (68-XX)
ARIA Software Authors: Linge, J.P., Habeck, M., Rieping, W., Nilges, M. Cited in: 4 Publications (2013–2018) Related Software: CNS; Xplor-NIH; CHARMM; CYANA; iBP; TM-align; … Main Fields: Operations research, mathematical programming (90-XX); Biology and other natural sciences (92-XX)
Circos Software Authors: Krzywinski, M., Schein, J., Birol, I., Connors, J., Gascoyne, R., Horsman, D., Jones, S.J., Marra, M.A. Cited in: 3 Publications (2018–2021) Related Software: Vega; Polaris; Hackage; Seaborn; ggplot2; OGDF; … Main Fields: Combinatorics (05-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)
GASTS Software Authors: Xu, A., Moret, B. Cited in: 4 Publications (2013–2019) Related Software: MSOAR; OrthoMCL; FastTree; GRAPPA; RAxML; Mauve; … Main Fields: General and overarching topics; collections (00-XX); Operations research, mathematical programming (90-XX); Biology and other natural sciences (92-XX)
GSPPCA Software Authors: Bouveyron, Charles; Latouche, Pierre; Mattei, Pierre-Alexandre Cited in: 5 Publications (2017–2020) Related Software: msda; PMA; Bessel; penalizedLDA; GitHub; PCANet; … Main Fields: Statistics (62-XX)
IntelliGEN Software Authors: Kochut, Krys; Arnold, Jonathan; Sheth, Amit; Miller, John; Kraemer, Eileen; Arpinar, Budak; Cardoso, Jorge Cited in: 4 Publications (2003–2012) Related Software: Woflan; Virtual Cell; JigCell; YSMP; MEG; STOCKS; … Main Fields: Computer science (68-XX); Operations research, mathematical programming (90-XX); Biology and other natural sciences (92-XX)
LPMode Software Authors: Mukhopadhyay, Subhadeep Cited in: 5 Publications (2017–2022) Related Software: R; TOHM; reldist; LPsmooth; Algorithm 457; bootstrap; … Main Fields: Statistics (62-XX); Information and communication theory, circuits (94-XX)
REDfly Software Authors: Halfon M, Gallo S, Bergman C Cited in: 2 Publications (2019–2020) Related Software: R; GitHub; expansion-network; MaBoSS; Python; Ginsim; … Main Fields: Biology and other natural sciences (92-XX)
XMRF Software Authors: Ying-Wooi Wan, Genevera I. Allen, Yulia Baker, Eunho Yang, Pradeep Ravikumar, Zhandong Liu Cited in: 4 Publications (2018–2021) Related Software: glasso; huge; R; stringr; gtools; Python; … Main Fields: Statistics (62-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)
BioGAP Software Authors: Attila Egry-Nagy; Andrew Francis; Volker Gebhardt Cited in: 4 Publications (2014–2019) Related Software: Mauve; GAP; GitHub; VIZ; TikZ; Graphviz Main Fields: Combinatorics (05-XX); Order, lattices, ordered algebraic structures (06-XX); Group theory and generalizations (20-XX)
CONFAC Software Authors: Suresh Karanam, Carlos S. Moreno Cited in: 1 Publication (2009) Related Software: CGHMultiArray; AS 62; ArrayExpress; JASPAR; rVISTA; AS 159 Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Computer science (68-XX)
DINGO Software Authors: Ha MJ, Baladandayuthapani V, Do K-A Cited in: 3 Publications (2019–2021) Related Software: glasso; ARACNE; DEseq; GeNGe; SynTReN; GeneNetWeaver; … Main Fields: Statistics (62-XX); Biology and other natural sciences (92-XX)
GenePattern Software Authors: Michael Reich, Ted Liefeld, Joshua Gould, Jim Lerner, Pablo Tamayo, Jill P Mesirov Cited in: 1 Publication (2016) Related Software: R; IntelliGO; FUNC; Aber-OWL; Ontobee; PlantTFDB; … Main Fields: Statistics (62-XX); Biology and other natural sciences (92-XX)
MetaSim Software Authors: Richter, D.C.; Ott, F.; Auch, A.F.; Schmid, R.; Huson, D.H. Cited in: 2 Publications (2017–2018) Related Software: ONE; BLAST; PSI-BLAST; MEGAN; Pfam; MetaCluster; … Main Fields: Statistics (62-XX); Biology and other natural sciences (92-XX)
Q-SiteFinder Software Authors: Alasdair T. R. Laurie, Richard M. Jackson Cited in: 2 Publications (2014) Related Software: LINCS; Gromacs; MrBayes; SETTLE; PyMOL; AutoDock Vina; … Main Fields: Biology and other natural sciences (92-XX)
sparsebn Software Authors: Bryon Aragam, Jiaying Gu, Qing Zhou Cited in: 2 Publications (2021–2022) Related Software: bnlearn; R; igraph; TETRAD; BayesianGLasso; BigQuic; … Main Fields: Statistics (62-XX); Computer science (68-XX)
UCSC genome browser Software Authors: Zweig AS, Karolchik D, Kuhn RM et al Cited in: 3 Publications (2002–2017) Related Software: ClustalW; MrBayes; GENCODE; BLASTZ; OXBench; PatternHunter; … Main Fields: General and overarching topics; collections (00-XX); Biology and other natural sciences (92-XX)
VirtualLeaf Software Authors: Merks, R., Guravage, M., Inzé, D., Beemster, G Cited in: 3 Publications (2015–2019) Related Software: PhysiCell; CellSys; Microvessel Chaste; EmbryoMaker; CompuCell3D; Morpheus; … Main Fields: Biology and other natural sciences (92-XX)
AFLOW-SYM Software Authors: Hicks, David; Oses, Corey; Gossett, Eric; Gomez, Geena; Taylor, Richard H.; Toher, Cormac; Mehl, Michael J.; Levy, Ohad; Curtarolo, Stefano Cited in: 3 Publications (2018–2020) Related Software: Spglib; PersistenceImages; PLATON; Phonopy; AFLUX; AFLOW; … Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Statistical mechanics, structure of matter (82-XX)
BayCount Software Authors: Xie, Fangzheng; Zhou, Mingyuan; Xu, Yanxun Cited in: 3 Publications (2018–2021) Related Software: R; PyClone; THetA; PhyloWGS; GitHub; PairClone; … Main Fields: Statistics (62-XX); Biology and other natural sciences (92-XX)
CLARK Software Authors: Ounit, R.; Wanamaker, S.; Close, T.J.; Lonardi, S. Cited in: 3 Publications (2017–2022) Related Software: MetaProb; SpEED; PatternHunter; SHRiMP; GTDB-Tk; CheckM; … Main Fields: Biology and other natural sciences (92-XX)
CRYSTALP2 Software Authors: Lukasz Kurgan, Ali A Razib, Sara Aghakhani, Scott Dick, Marcin Mizianty, Samad Jahandideh Cited in: 3 Publications (2011–2016) Related Software: ParCrys; Cd-hit; iLoc-Plant; NR-2L; RSARF; AFP-Pred; … Main Fields: Statistics (62-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)
gfpop Software Authors: Vincent Runge, Toby Dylan Hocking, Gaetano Romano, Fatemeh Afghah, Paul Fearnhead, Guillem Rigaill Cited in: 1 Publication (2020) Related Software: R; PeakSegOptimal; wbs; PeakSegDisk; isotone; PeakSeg; … Main Fields: Calculus of variations and optimal control; optimization (49-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)
IGV Software Authors: Thorvaldsdóttir H, Robinson JT, Mesirov JP Cited in: 3 Publications (2016–2018) Related Software: BEDTools; R; FastQC; Samtools; FIMO; BioMart; … Main Fields: General and overarching topics; collections (00-XX); Statistics (62-XX); Biology and other natural sciences (92-XX)
netgwas Software Authors: Pariya Behrouzi, Ernst C. Wit Cited in: 1 Publication (2019) Related Software: igraph; Matrix; R; pergola; R/qtl; MASS (R); … Main Fields: Statistics (62-XX); Biology and other natural sciences (92-XX)
ParCrys Software Authors: Ian M. Overton, Gianandrea Padovani, Mark A. Girolami, Geoffrey J. Barton Cited in: 2 Publications (2012–2016) Related Software: CRYSTALP2; iLoc-Plant; NR-2L; RSARF; AFP-Pred; iLoc-Euk; … Main Fields: Statistics (62-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)
Profunc Software Authors: R. A. Laskowski, J. D. Watson, J. M. Thornton Cited in: 1 Publication (2015) Related Software: I-TASSER; SW1PerS; UProC; PBEQ-Solver; DOMpro; darch; … Main Fields: Biology and other natural sciences (92-XX)
Qxpak Software Authors: Miguel Pérez-Enciso; Ignacy Misztal Cited in: 1 Publication (2007) Related Software: ProbABEL; Eigenstrat; IMPUTE; GenABEL; PLINK; QTL Cartographer; … Main Fields: Statistics (62-XX); Numerical analysis (65-XX)
Rnaz Software Authors: Gruber AR, Findeiss S, Washietl S, Hofacker IL, Stadler PF Cited in: 2 Publications (2015–2017) Related Software: Bioconductor; Rfam; R; ViennaRNA; TopHat; KEGG; … Main Fields: General and overarching topics; collections (00-XX); Biology and other natural sciences (92-XX)
SpectralNET Software Authors: Forman JJ1, Clemons PA, Schreiber SL, Haggarty SJ. Cited in: 2 Publications (2011) Related Software: Graph Investigator; StOCNET; LAPACK; k-means++; GeneRAGE; ProClust; … Main Fields: Combinatorics (05-XX); Computer science (68-XX); Operations research, mathematical programming (90-XX)
SplitMEM Software Authors: S. Marcus, H. Lee, M. C. Schatz Cited in: 3 Publications (2017–2022) Related Software: tbwt; BWA; Rainbowfish; deBGA; vg; HISAT Main Fields: Combinatorics (05-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)
SRA Software Authors: National Center for Biotechnology Information, U.S. National Library of Medicine Cited in: 3 Publications (2011–2014) Related Software: EDAseq; changepoint; edgeR; Bioconductor; R; CRAN Main Fields: Statistics (62-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)
XCVMTest Software Authors: YuanHai Xiao; Alexander Gordon and Andrei Yakovlev Cited in: 2 Publications (2014–2017) Related Software: R; Quicksort; ElemStatLearn; UCI-ml Main Fields: Statistics (62-XX); Computer science (68-XX)
adjclust Software Authors: Christophe Ambroise, Shubham Chaturvedi, Alia Dehman, Michel Koskas, Pierre Neuvial, Guillem Rigaill, Nathalie Vialaneix Cited in: 1 Publication (2021) Related Software: CONISS; ClustGeo; capushe; Matrix; HiTC; snpStats; … Main Fields: Statistics (62-XX)
AutoFACT Software Authors: Koski, L.B., Gray, M.W., Lang, B.F., Burger, G. Cited in: 1 Publication (2007) Related Software: Pfam; BLAST; Blast2GO; PSI-BLAST; Profunc; MUSCLE; … Main Fields: Biology and other natural sciences (92-XX)
BEDOPS Software Authors: Shane Neph, Alex P. Reynolds, M. Scott Kuehn, John A. Stamatoyannopoulos Cited in: 2 Publications (2016–2022) Related Software: Scala; Galaxy; ROAST; featureCounts; Rsubread; recount; … Main Fields: Statistics (62-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)
BioGrapher Software Authors: Viswanathan, Rama; Liang, Sijia; Yang, Yang; Jungck, John R. Cited in: 2 Publications (2015–2016) Related Software: JavaBENZER; Excel; VBA; Visual Basic; Graphviz Main Fields: Combinatorics (05-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)
BisoGenet Software Authors: Martin, A., Ochagavia, M. E., Rabasa, L. C., Miranda, J., Fernandez‐de Cossio, J., Bringas, R. Cited in: 1 Publication (2018) Related Software: – Main Fields: Statistics (62-XX); Biology and other natural sciences (92-XX)
clustRviz Software Authors: Weylandt, Michael; Nagorski, John; Allen, Genevera I. Cited in: 2 Publications (2020–2021) Related Software: clusterpath; ConvexLAR; t-SNE; k-means++; DEseq Main Fields: Statistics (62-XX); Computer science (68-XX)
ConFunc Software Authors: Mark N. Wass, Michael J. E. Sternberg Cited in: 1 Publication (2010) Related Software: ConSeq; MAMMOTH; PSLpred; iTOL; TM-align; BLAST; … Main Fields: Biology and other natural sciences (92-XX)
CoreSNP Software Authors: Guzzi, Pietro Hiram; Agapito, Giuseppe; Cannataro, Mario Cited in: 2 Publications (2014–2019) Related Software: Cloud4SNP; MapReduce Main Fields: Computer science (68-XX); Biology and other natural sciences (92-XX)
deBWT Software Authors: Liu, B.; Zhu, D.; Wang, Y. Cited in: 2 Publications (2017–2020) Related Software: – Main Fields: Computer science (68-XX)
GALGO Software Authors: Trevino V, Falciani F Cited in: 0 Publications Related Software: R; rJava; glmpath; bestglm; MuMIn; Glmulti; … Main Fields: –
Genoviz Software Authors: Helt GA, Nicol JW, Erwin E, Blossom E, Blanchard SG, Chervitz SA et al Cited in: 1 Publication (2016) Related Software: Galaxy; ROAST; featureCounts; Rsubread; recount; PROPER; … Main Fields: Statistics (62-XX); Biology and other natural sciences (92-XX)
Gviz Software Authors: Florian Hahne, Robert Ivanek Cited in: 2 Publications (2016–2021) Related Software: STAR; BSgenome; TopHat; FastQC; KEGG; edgeR; … Main Fields: Statistics (62-XX); Biology and other natural sciences (92-XX)
hidetify Software Authors: Barry, Amadou; Bhagwat, Nikhil; Misic, Bratislav; Poline, Jean-Baptiste; Greenwood, Celia M. T. Cited in: 2 Publications (2022) Related Software: R; SAS/STAT; copula; expectgee; copula; geepack; … Main Fields: Statistics (62-XX)
HTSanalyzeR Software Authors: Xin Wang, Camille Terfve, John C. Rose, Florian Markowetz Cited in: 1 Publication (2022) Related Software: Dendrix; ModuleDiscoverer; SigMod; DOMINO; NetSig; DIAMOnD; … Main Fields: Biology and other natural sciences (92-XX)
i-ADHoRe Software Authors: Proost, S., Fostier, J., De Witte, D., Dhoedt, B., Demeester, P., Van de Peer, Y., Vandepoele, K. Cited in: 2 Publications (2019) Related Software: CYNTENATOR; Sibelia; CAMSA; hybridSPAdes; GTED; HINGE; … Main Fields: General and overarching topics; collections (00-XX); Operations research, mathematical programming (90-XX); Biology and other natural sciences (92-XX)
INFUSE Software Authors: Dunemann, Oliver; Geist, Ingolf; Jesse, Roland; Sattler, Kai-Uwe; Stephanik, Andreas Cited in: 2 Publications (2002–2003) Related Software: – Main Fields: Computer science (68-XX)
LUMPY Software Authors: Ryan M. Layer, Colby Chiang, Aaron R. Quinlan, Ira M. Hall Cited in: 1 Publication (2017) Related Software: Pindel; Delly; wgsim; Samtools; YAHA; GitHub; … Main Fields: Biology and other natural sciences (92-XX)
MUMmer4 Software Authors: Marçais, G., Delcher, A.L., et al. Cited in: 2 Publications (2020–2022) Related Software: essaMEM; Edlib; Winnowing; lra; CoCoNUT; Minimap2; … Main Fields: Biology and other natural sciences (92-XX)
ntCard Software Authors: Mohamadi, H., Khan, H., Birol, I. Cited in: 2 Publications (2019–2020) Related Software: TTA Lynx; CodonW; CodonPhyML; ACUA; PAML; CodonTest; … Main Fields: Biology and other natural sciences (92-XX)
pcaReduce Software Authors: Justina Zurauskiene. Christopher Yau Cited in: 2 Publications (2017–2022) Related Software: SC3; sparcl; DIMM-SC; umap; pdfCluster; PRMLT; … Main Fields: Statistics (62-XX); Computer science (68-XX)
phyloscanner Software Authors: Wymant C, Hall M, Ratmann O, Bonsall D, Golubchik T de Cesare M, Gall A, Cornelissen M, Fraser C Cited in: 2 Publications (2018–2022) Related Software: BoundedCoalescent; phylodyn; SimPhy; Rcpp; ape; R; … Main Fields: General and overarching topics; collections (00-XX); Combinatorics (05-XX); Statistics (62-XX)
QAPgrid Software Authors: Inostroza-Ponta M, Berretta R, Moscato P Cited in: 2 Publications (2017–2021) Related Software: HAS-QAP; Wumpus; QAPLIB; TreeWiz; starBase; LocARNAscan; … Main Fields: General and overarching topics; collections (00-XX); Operations research, mathematical programming (90-XX); Biology and other natural sciences (92-XX)
saa Software Authors: Zhao, Sihai Dave Cited in: 2 Publications (2017–2021) Related Software: TULIP; ranger; limma; glmnet; Bioconductor; LDAK; … Main Fields: Statistics (62-XX); Biology and other natural sciences (92-XX)
sansSouci Software Authors: Durand, Guillermo; Blanchard, Gilles; Neuvial, Pierre; Roquain, Etienne Cited in: 2 Publications (2020) Related Software: GitHub; R Main Fields: Statistics (62-XX)
stAIcalc Software Authors: Renana Sabi, Renana Volvovitch Daniel, Tamir Tuller Cited in: 2 Publications (2020–2022) Related Software: TTA Lynx; CodonW; CodonPhyML; ntCard; ACUA; PAML; … Main Fields: Biology and other natural sciences (92-XX)
Starr Software Authors: Benedikt Zacher, Achim Tresch Cited in: 0 Publications Related Software: Bioconductor; Ringo; R Main Fields: –
TESD Software Authors: Grégory Deceliere, Yann Letrillard, Sandrine Charles, Christian Biémont Cited in: 1 Publication (2008) Related Software: – Main Fields: Probability theory and stochastic processes (60-XX); Biology and other natural sciences (92-XX)
TOUCAN Software Authors: Aerts, S., Van Loo, P., Thijs, G., Maye r, H., de Martin, R., Moreau, Y., De Moor, B. Cited in: 1 Publication (2007) Related Software: EMBOSS; SMART; DAMBE; AMADA; YACOP; GOtcha; … Main Fields: Biology and other natural sciences (92-XX)
VATRAM Software Authors: Jens Quedenfeld, Sven Rahmann Cited in: 1 Publication (2017) Related Software: – Main Fields: Biology and other natural sciences (92-XX)
wCluto Software Authors: Matthew D. Rasmussen; Mukund S. Deshpande; George Karypis; James Johnson; John A. Crow; Ernest F. Retzel Cited in: 0 Publications Related Software: WordNet; eXist; Jalview; PROSITE; MUSCLE; ClustalW Main Fields: –
abSNP Software Authors: Mao, Shunfu; Mohajer, Soheil; Ramachandran, Kannan; Tse, David; Kannan, Sreeram Cited in: 1 Publication (2017) Related Software: Sniper; GlfMultiples; RNASeqReadSimulator; SNVMix; VarScan; RSEM; … Main Fields: Biology and other natural sciences (92-XX)
Aevol Software Authors: Bérénice Batut, David P Parsons, Stephan Fischer, Guillaume Beslon, Carole Knibbe Cited in: 1 Publication (2016) Related Software: INDELible; ALF; SimPhy Main Fields: Biology and other natural sciences (92-XX)
aPCoA Software Authors: Yushu Shi Cited in: 0 Publications Related Software: mvabund; shiny; R Main Fields: –
ArchiLD Software Authors: Melchiotti, R.; Rötzschke, O.; Poidinger, M. Cited in: 1 Publication (2020) Related Software: MetNetGE; WebMap Main Fields: Statistical mechanics, structure of matter (82-XX)