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Found 73 Software Packages (Results 1–73)

ARACNE

Software Authors:   A. A. Margolin, I. Nemenman, K. Basso, C. Wiggins, G. Stolovitzky, R. D. Favera, A. Califano
Cited in: 34 Publications (2009–2022)
Related Software: minet; KEGG; glasso; SynTReN; GeneNetWeaver; R; …
Main Fields: Statistics (62-XX); Computer science (68-XX); Operations research, mathematical programming (90-XX)

InfoGAN

Software Authors:   Xi Chen, Yan Duan, Rein Houthooft, John Schulman, Ilya Sutskever, Pieter Abbeel
Cited in: 29 Publications (2017–2022)
Related Software: Wasserstein GAN; Adam; ImageNet; CIFAR; StyleGAN; MNIST; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Computer science (68-XX)

REVEAL

Software Authors:   Liang, S., Fuhrman, S., Somogyi, R
Cited in: 24 Publications (2003–2022)
Related Software: KEGG; R; BoolNet; E-CELL; t-SNE; GEPASI; …
Main Fields: Statistics (62-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)

SUN

Software Authors:   L. Zhang, M. H. Tong, T. K. Marks, H. Shan, and G. W.Cottrell
Cited in: 8 Publications (2011–2019)
Related Software: gbvs; SaliencyToolbox; GrabCut; MAXFLOW; apcluster; APCluster; …
Main Fields: Statistics (62-XX); Computer science (68-XX); Information and communication theory, circuits (94-XX)

JIDT

Software Authors:   Joseph T. Lizier, Ipek Özdemir, Pedro Mediano
Cited in: 6 Publications (2018–2020)
Related Software: TRENTOOL; MuTE; IDTxl; Python; NetComp; NetLSD; …
Main Fields: Dynamical systems and ergodic theory (37-XX); Statistics (62-XX); Statistical mechanics, structure of matter (82-XX)

SNIF-ACT

Software Authors:   Pirolli, Peter; Fu, Wai-Tat
Cited in: 4 Publications (2003–2013)
Related Software: SATO; KEA
Main Fields: Computer science (68-XX)

dnner

Software Authors:   Marylou Gabrié, Andre Manoel, Clément Luneau, Jean Barbier, Nicolas Macris, Florent Krzakala, Lenka Zdeborová
Cited in: 8 Publications (2019–2022)
Related Software: lsd; TheCommitteeMachine; AlexNet; GNMT; ImageNet; Adam; …
Main Fields: Linear and multilinear algebra; matrix theory (15-XX); Probability theory and stochastic processes (60-XX); Statistics (62-XX)

minet

Software Authors:   Meyer, P.E.; Lafitte, F.; Bontempi, G.
Cited in: 7 Publications (2010–2019)
Related Software: ARACNE; SynTReN; R; edgeR; glasso; igraph; …
Main Fields: General and overarching topics; collections (00-XX); Combinatorics (05-XX); Statistics (62-XX)

NESToolbox

Software Authors:   Kira Rehfeld, Bedartha Goswami
Cited in: 7 Publications (2014–2021)
Related Software: PearsonT; S-PLUS; MEMSS; BINCOR; nuSpectral; K2; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Numerical analysis (65-XX)

PSICOV

Software Authors:   David T. Jones, Daniel W. A. Buchan, Domenico Cozzetto, Massimiliano Pontil
Cited in: 6 Publications (2014–2021)
Related Software: R; Pfam; BLAST; PSI-BLAST; NNcon; bnlearn; …
Main Fields: Statistics (62-XX); Statistical mechanics, structure of matter (82-XX); Operations research, mathematical programming (90-XX)

CMfinder

Software Authors:   Z. Yao, Z. Weinberg, W.L. Ruzzo
Cited in: 4 Publications (2008–2018)
Related Software: Infernal; Rfam; pLoc-mHum; FoldRate; iDNA4mC; PROSPERous; …
Main Fields: General and overarching topics; collections (00-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)

ITE

Software Authors:   Szabó, Zoltán
Cited in: 6 Publications (2014–2020)
Related Software: VistaLab; ColorLab; PerceptNet; NetBenchmark; ARACNE; GitHub; …
Main Fields: Statistics (62-XX); Quantum theory (81-XX); Relativity and gravitational theory (83-XX)

NARROMI

Software Authors:   Zhang, X.; Liu, K.; Liu, Z. P.; Duval, B.; Richer, J. M.; Zhao, X. M.; Hao, J. K.; Chen, L.
Cited in: 6 Publications (2014–2019)
Related Software: BENEDICT; TETRAD; pcalg; impute; Matrix eQTL; SIRENE; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Computer science (68-XX)

GNNExplainer

Software Authors:   Rex Ying, Dylan Bourgeois, Jiaxuan You, Marinka Zitnik, Jure Leskovec
Cited in: 3 Publications (2021–2023)
Related Software: PyTorch; TUDataset; StellarGraph; CogDL; XGNN; MoleculeNet; …
Main Fields: Computer science (68-XX); Operations research, mathematical programming (90-XX)

IDTxl

Software Authors:   Wollstadt, Patricia, Lizier, Joseph T., Vicente, Raul, Finn, Conor, Martínez-Zarzuela, Mario, Mediano, Pedro, Novelli, Leonardo, Wibral, Michael
Cited in: 1 Publication (2020)
Related Software: JIDT; MuTE; TRENTOOL; infotheory; Python; pycit; …
Main Fields: Biology and other natural sciences (92-XX)

dit

Software Authors:   Ryan G. James, Christopher J. Ellison, James P. Crutchfield
Cited in: 1 Publication (2019)
Related Software: Python; Matplotlib; SciPy; NumPy; Embo; IDTxl; …
Main Fields: Statistics (62-XX); Information and communication theory, circuits (94-XX)

InfoGraph

Software Authors:   Fan-Yun Sun, Jordan Hoffmann, Vikas Verma, Jian Tang
Cited in: 2 Publications (2020–2021)
Related Software: CogDL; PyTorch; node2vec; RotatE; GraRep; TUDataset; …
Main Fields: Computer science (68-XX)

ARACNe-AP

Software Authors:   Lachmann A, Giorgi FM, Lopez G, Califano A.
Cited in: 2 Publications (2018–2019)
Related Software: pycit; infotheory; IDTxl; MDEntropy; SciPy; NumPy; …
Main Fields: Biology and other natural sciences (92-XX)

BatchBALD

Software Authors:   Andreas Kirsch, Joost van Amersfoort, Yarin Gal
Cited in: 1 Publication (2021)
Related Software: ImageNet; PyTorch; Cardinal; modAL; PyTorch Lightning; SuperGLUE; …
Main Fields: Statistics (62-XX)

GlobalMIT

Software Authors:   Vinh, N.X., Chetty, M., Coppel, R., Wangikar, P.P.
Cited in: 3 Publications (2015–2021)
Related Software: ARACNE; KEGG; MAST; MrTADFinder; slingshot; SNN-Cliq; …
Main Fields: Statistics (62-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)

LeakWatch

Software Authors:   Chothia, T.; Kawamoto, Y.; Novakovic, C
Cited in: 2 Publications (2016–2019)
Related Software: DTA++; QUAIL; ANTLR; PrivateLR
Main Fields: Statistics (62-XX); Computer science (68-XX); Information and communication theory, circuits (94-XX)

mRMRe

Software Authors:   Nicolas De Jay, Simon Papillon-Cavanagh, Catharina Olsen, Gianluca Bontempi, Benjamin Haibe-Kains
Cited in: 2 Publications (2016–2021)
Related Software: GSelection; UBayFS; Rdimtools; GA; Boruta; caret; …
Main Fields: Statistics (62-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)

PIROL

Software Authors:   Herrmann, Stephan
Cited in: 3 Publications (2002–2003)
Related Software: AspectJ; ArchJava
Main Fields: Computer science (68-XX)

STEAM

Software Authors:   Lorenzo Bortot, Bernhard Auchmann, Idoia Cortes Garcia, Alejando M. Fernando Navarro, Michał Maciejewski, Matthias Mentink, Marco Prioli, Emmanuele Ravaioli, Sebastian Schöps, Arjan Verweij
Cited in: 3 Publications (2020–2021)
Related Software: COMSOL; RIDC; Matlab; Maple
Main Fields: Ordinary differential equations (34-XX); Partial differential equations (35-XX); Numerical analysis (65-XX)

UJMP

Software Authors:   Holger Arndt et. al.
Cited in: 1 Publication (2015)
Related Software: Matlab; LSODE; JScience; odeToJava; SciTools; SLOCCount; …
Main Fields: Numerical analysis (65-XX); Computer science (68-XX)

Adaptive Threshold

Software Authors:   Boaz Lerner, Michal Afek, Rafi Bojmel
Cited in: 2 Publications (2019–2021)
Related Software: TETRAD; BNT
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Computer science (68-XX)

BTSystem

Software Authors:   Tabakin, Frank
Cited in: 2 Publications (2016–2018)
Related Software: QCMPI; AlgoWiki; QC-lib; Quipper; QCWAVE; QDENSITY; …
Main Fields: Computer science (68-XX); Quantum theory (81-XX)

H2r

Software Authors:   Rainer Merkl; Matthias Zwick
Cited in: 2 Publications (2010–2011)
Related Software: AL2CO; SHARP2; meta-PPISP
Main Fields: Statistics (62-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)

infotheory

Software Authors:   Madhavun Candadai; Eduardo J. Izquierdo
Cited in: 0 Publications
Related Software: IDTxl; Python; pycit; MDEntropy; ARACNe-AP; SciPy; …
Main Fields:

InterMap3D

Software Authors:   Gouveia-Oliveira, R.; Roque, F.S.; Wernersson, R.; Sicheritz-Ponten, T.; Sackett, P.W.; Mølgaard, A.; Pedersen, A.G.
Cited in: 1 Publication (2012)
Related Software: MUSCLE; BEAST
Main Fields: Combinatorics (05-XX); Statistics (62-XX); Numerical analysis (65-XX)

MIDER

Software Authors:   Villaverde, A., Ross, J., Morán, F., and Banga, J.R.
Cited in: 2 Publications (2018–2019)
Related Software: RapidMic; JIDT; ARACNE; SynTReN
Main Fields: Combinatorics (05-XX); Ordinary differential equations (34-XX); Statistics (62-XX)

npeet

Software Authors:   Greg Ver Steeg
Cited in: 2 Publications (2015–2019)
Related Software: GitHub; GPy; ITE; Scikit
Main Fields: Dynamical systems and ergodic theory (37-XX); Statistics (62-XX); Quantum theory (81-XX)

Tigramite

Software Authors:   Jakob Runge
Cited in: 2 Publications (2018–2020)
Related Software: TETRAD; GitHub; pcalg
Main Fields: Statistics (62-XX)

TSTOOL

Software Authors:   C. Merkwirth, U. Parlitz, W. Lauterborn
Cited in: 1 Publication (2009)
Related Software:
Main Fields: Dynamical systems and ergodic theory (37-XX); Information and communication theory, circuits (94-XX)

varrank

Software Authors:   Gilles Kratzer, Reinhard Furrer
Cited in: 0 Publications
Related Software: R; Rgraphviz; RStudio; BiDAG; rjags; RWeka; …
Main Fields:

aricode

Software Authors:   Julien Chiquet, Guillem Rigaill, Valentin Dervieux
Cited in: 0 Publications
Related Software: huge; pROC; blockmodels; ergm; CRAN Task Views; bnstruct; …
Main Fields:

BNFinder2

Software Authors:   Norbert Dojer; Paweł Bednarz; Agnieszka Podsiadło; Bartek Wilczyński
Cited in: 1 Publication (2016)
Related Software: CGBayesNets
Main Fields: Statistics (62-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)

BRAINSTools

Software Authors:   Johnson H, Harris G, Williams K
Cited in: 0 Publications
Related Software: devtools; oro.nifti; CRAN Task Views; dcemriS4; R; oro.dicom; …
Main Fields:

CellPyLib

Software Authors:   Luis M. Antunes
Cited in: 0 Publications
Related Software: Matplotlib; NumPy; Python
Main Fields:

copent

Software Authors:   MA Jian
Cited in: 0 Publications
Related Software: Python; UCI-ml; mnormt; R
Main Fields:

CRP Toolbox

Software Authors:   Cao, L.
Cited in: 1 Publication (2016)
Related Software: K2
Main Fields: Dynamical systems and ergodic theory (37-XX); Systems theory; control (93-XX)

duffing-cmi

Software Authors:   Brešar, Martin; Boškoski, Pavle; Horvat, Martin
Cited in: 1 Publication (2021)
Related Software:
Main Fields: Ordinary differential equations (34-XX); Dynamical systems and ergodic theory (37-XX)

ennemi

Software Authors:   Petri Laarne, Martha A. Zaidan, Tuomo Nieminen
Cited in: 0 Publications
Related Software: pycit; infotheory; IDTxl; MDEntropy; ARACNe-AP; SciPy; …
Main Fields:

entropy

Software Authors:   Jean Hausser, Korbinian Strimmer
Cited in: 1 Publication (2022)
Related Software: pcalg; mvtnorm; catnet; tfplot; tframe; profileModel; …
Main Fields: Statistics (62-XX); Computer science (68-XX)

EntropyEstimation

Software Authors:   Lijuan Cao; Michael Grabchak
Cited in: 0 Publications
Related Software: R; SPECIES; ade4; vegetarian; entropart
Main Fields:

epiACO

Software Authors:   Sun, Y.; Shang, J.; Liu, J. X.; Li, S.
Cited in: 1 Publication (2021)
Related Software: DESeeker; GWAS Catalog; SNPHarvester; MACOED; GAMETES
Main Fields: Statistics (62-XX); Computer science (68-XX)

EpimiR

Software Authors:   Dai E, Yu X, Zhang Y, Meng F, Wang S, Liu X, Liu D, Wang J, Li X, Jiang W
Cited in: 1 Publication (2018)
Related Software: miRNet; SQUAD; Jimena; ClueGO; gcrma; RedeR; …
Main Fields: Biology and other natural sciences (92-XX)

GoMSC

Software Authors:   Malekpour, Sheida; Gubner, John A.; Sethares, William A.
Cited in: 1 Publication (2018)
Related Software: Matlab; GitHub
Main Fields: Systems theory; control (93-XX); Information and communication theory, circuits (94-XX)

Inforence

Software Authors:   Feyzi, F; Parsa, S
Cited in: 1 Publication (2018)
Related Software: PinPoint; Diablo; HSFal; JavaPDG; Defects4J; Valgrind
Main Fields: Computer science (68-XX)

Inform

Software Authors:   Moore DG, Valentini G, Walker SI, Levin M
Cited in: 1 Publication (2020)
Related Software: rinform; R
Main Fields: Fluid mechanics (76-XX); Biology and other natural sciences (92-XX)

LYAPROSEN

Software Authors:   Shapour, M.
Cited in: 1 Publication (2021)
Related Software:
Main Fields: Mechanics of particles and systems (70-XX); Systems theory; control (93-XX)

MatrixPlot

Software Authors:   J Gorodkin, H H Staerfeldt, O Lund, S Brunak
Cited in: 1 Publication (2004)
Related Software:
Main Fields: Statistics (62-XX); Biology and other natural sciences (92-XX)

MDPCluster

Software Authors:   Fozuni Shirjini, Mahsa; Farzi, Saeed; Nikanjam, Amin
Cited in: 1 Publication (2020)
Related Software:
Main Fields: Combinatorics (05-XX); Computer science (68-XX); Game theory, economics, finance, and other social and behavioral sciences (91-XX)

MILCA

Software Authors:   S. Astakhov, P. Grassberger, A. Kraskov, H. Stögbauer
Cited in: 0 Publications
Related Software: MVGC; FieldTrip; TRENTOOL; ChaLearn; JPID; TIM; …
Main Fields:

MIxBN

Software Authors:   Anna V. Bubnova, Irina Deeva, Anna V. Kalyuzhnaya
Cited in: 0 Publications
Related Software: deal; bnlearn
Main Fields:

mpmi

Software Authors:   Chris Pardy
Cited in: 1 Publication (2023)
Related Software: R; mclust; IndepTest; infotheo; ppgmmga; rmi; …
Main Fields: Statistics (62-XX)

PearsonICA

Software Authors:   Juha Karvanen
Cited in: 0 Publications
Related Software: R; mlica2; ICALAB; fICA; tuneR; ica; …
Main Fields:

PREMER

Software Authors:   Villaverde, A.F.; Becker, K.; Banga, J.R.
Cited in: 1 Publication (2017)
Related Software: GeneNetWeaver; hiPathDB; DREAMTools; Clingo
Main Fields: Statistics (62-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)

PRSentiMiner

Software Authors:   Shi, Wei
Cited in: 1 Publication (2018)
Related Software:
Main Fields: Game theory, economics, finance, and other social and behavioral sciences (91-XX)

PyBEST

Software Authors:   Katharina Boguslawski, Aleksandra Leszczyk, Artur Nowak, Filip Brzęk, Piotr Szymon Żuchowski, Dariusz Kędziera, Paweł Tecmer
Cited in: 0 Publications
Related Software: SPHINX; EinSum; CuPy; Jmol; Psi4NumPy; NumPy; …
Main Fields:

PyChain

Software Authors:   Yiwen Shao, Yiming Wang, Daniel Povey, Sanjeev Khudanpur
Cited in: 0 Publications
Related Software: Kaldi; LibriSpeech; Adam; pybind11; PyKaldi; PyTorch; …
Main Fields:

pycit

Software Authors:   Yang A.
Cited in: 0 Publications
Related Software: infotheory; IDTxl; MDEntropy; ARACNe-AP; SciPy; NumPy; …
Main Fields:

pyCLAMs

Software Authors:   Yinsheng Zhang, Haiyan Wang, Yongbo Cheng, Xiaolin Qin
Cited in: 0 Publications
Related Software: ECoL; DCoL; Python
Main Fields:

RILogo

Software Authors:   Menzel P, Seemann SE, Gorodkin J
Cited in: 1 Publication (2015)
Related Software: EMBOSS; Minimus; EMIRGE; ViennaRNA; TagCleaner; OligoWalk; …
Main Fields: General and overarching topics; collections (00-XX); Biology and other natural sciences (92-XX)

rmi

Software Authors:   Isaac Michaud
Cited in: 1 Publication (2023)
Related Software: R; mclust; IndepTest; infotheo; ppgmmga; mpmi; …
Main Fields: Statistics (62-XX)

SCATTER

Software Authors:   Thiebeauld, Hugues; Gagnerot, Georges; Wurcker, Antoine; Clavier, Christophe
Cited in: 1 Publication (2018)
Related Software:
Main Fields: Information and communication theory, circuits (94-XX)

AskNow

Software Authors:   Mohnish Dubey; Sourish Dasgupta; Ankit Sharma; Konrad Höffner; Jens Lehmann
Cited in: 0 Publications
Related Software:
Main Fields:

DySC

Software Authors:   Zheng Z, Kramer S, Schmidt B.
Cited in: 0 Publications
Related Software:
Main Fields:

KoNLP

Software Authors:   Heewon Jeon, Taekyung Kim
Cited in: 0 Publications
Related Software:
Main Fields:

parmigene

Software Authors:   Gabriele Sales, Chiara Romualdi
Cited in: 0 Publications
Related Software:
Main Fields:

RepCloud

Software Authors:   Ruan A, Martin A
Cited in: 0 Publications
Related Software:
Main Fields:

TransferEntropy

Software Authors:   David Mount, Sunil Arya, Ghazaleh Haratinezhad Torbati, Glenn Lawyer
Cited in: 0 Publications
Related Software:
Main Fields:

zebu

Software Authors:   Olivier M. F. Martin, Michel Ducher
Cited in: 0 Publications
Related Software:
Main Fields: