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Found 45 Software Packages (Results 1–45)

AUTO

Software Authors:   Doedel, Eusebius, Alan Champneys, Fabio Dercole, Thomas Fairgrieve, Yuri Kuznetsov, Bart Oldeman, Randy Paffenroth, Bjorn Sandstede, Xianjun Wang, and Chenghai Zhang
Cited in: 959 Publications (1981–2023)
Related Software: AUTO-07P; HomCont; AUTO-86; MATCONT; XPPAUT; Matlab; …
Main Fields: Ordinary differential equations (34-XX); Partial differential equations (35-XX); Dynamical systems and ergodic theory (37-XX)

DYNAMO

Software Authors:   Jay Wright Forrester, Phyllis Fox, Alexander L. Pugh III, Grace Duren
Cited in: 248 Publications (1968–2022)
Related Software: Vensim; STELLA; AnyLogic; NetLogo; Cognizer; SEXTANT; …
Main Fields: Computer science (68-XX); Operations research, mathematical programming (90-XX); Game theory, economics, finance, and other social and behavioral sciences (91-XX)

COPS

Software Authors:   Dolan ED, Moré JJ
Cited in: 37 Publications (2001–2022)
Related Software: AMPL; SNOPT; CUTEr; Ipopt; LANCELOT; SifDec; …
Main Fields: Calculus of variations and optimal control; optimization (49-XX); Numerical analysis (65-XX); Computer science (68-XX)

BacSim

Software Authors:   J. Kreft, G. Booth, J.W.T. Wimpenny
Cited in: 21 Publications (2000–2021)
Related Software: AgentCell; iDynoR; STOCHSIM; MatPack; FreeFem++; AceFEM; …
Main Fields: Partial differential equations (35-XX); Statistics (62-XX); Numerical analysis (65-XX)

FluTE

Software Authors:   Chao, D. L.; Halloran, M. E.; Obenchain, V. J.; Longini Jr, I. M.
Cited in: 11 Publications (2013–2022)
Related Software: Covasim; emdbook; DEDiscover; EpiFire; ANTIGONE; SNOPT; …
Main Fields: Dynamical systems and ergodic theory (37-XX); Statistics (62-XX); Computer science (68-XX)

Biota

Software Authors:   B. Jones,W. Werner, J. Schrank
Cited in: 7 Publications (1994–2005)
Related Software: NADA; MINITAB; BioQUEST
Main Fields: Dynamical systems and ergodic theory (37-XX); Statistics (62-XX); Classical thermodynamics, heat transfer (80-XX)

FRED

Software Authors:   Grefenstette, J.J., Brown, S.T., Rosenfeld, R., DePasse, J., Stone, N.T., Cooley, P.C., Wheaton, W.D., Fyshe, A., Galloway, D.D., Sriram, A., et al.
Cited in: 6 Publications (2015–2021)
Related Software: R; GitHub; GEMFsim; SNAP; EpiModel; Epigrass; …
Main Fields: Statistics (62-XX); Computer science (68-XX); Game theory, economics, finance, and other social and behavioral sciences (91-XX)

SORTIE

Software Authors:   Pierre Magal, Zhengyang Zhang
Cited in: 5 Publications (2017–2022)
Related Software: FreeFem++
Main Fields: Partial differential equations (35-XX); Calculus of variations and optimal control; optimization (49-XX); Numerical analysis (65-XX)

ABED

Software Authors:   Izquierdo, Luis R.; Izquierdo, Segismundo S.; Sandholm, William H.
Cited in: 4 Publications (2018–2020)
Related Software: EvoDyn-3s; PDToolbox; Dynamo; egtplot; Mathematica; birds; …
Main Fields: Global analysis, analysis on manifolds (58-XX); Game theory, economics, finance, and other social and behavioral sciences (91-XX)

EvoDyn-3s

Software Authors:   Luis R. Izquierdo; Segismundo S. Izquierdo; William H. Sandholm
Cited in: 3 Publications (2019–2022)
Related Software: ABED; PDToolbox; Dynamo; birds; BehaviorSpace; NetLogo; …
Main Fields: Game theory, economics, finance, and other social and behavioral sciences (91-XX)

MI-Sim

Software Authors:   M. J. Wade, J. Oakley, S. Harbisher, N. G. Parker, J. Dolfing
Cited in: 3 Publications (2018–2022)
Related Software: Maple; MATCONT
Main Fields: Ordinary differential equations (34-XX); Biology and other natural sciences (92-XX)

PDToolbox

Software Authors:   Barreto, C.
Cited in: 2 Publications (2017–2019)
Related Software: EvoDyn-3s; Dynamo; ABED; birds; BehaviorSpace; NetLogo; …
Main Fields: Game theory, economics, finance, and other social and behavioral sciences (91-XX); Biology and other natural sciences (92-XX)

VORTEX

Software Authors:   Lacy, R.C., J.P. Pollak
Cited in: 3 Publications (1997–2021)
Related Software: dissolFoam; Chombo-Crunch; ASCL; EBChombo; CrunchFlow; ImageJ; …
Main Fields: Fluid mechanics (76-XX); Geophysics (86-XX); Biology and other natural sciences (92-XX)

CASAL

Software Authors:   Bull, B., Francis, R.I.C.C., Dunn, A., McKenzie, A., Gilbert, D.J., Smith, M.H., Bian, R., Fu, D.
Cited in: 1 Publication (2021)
Related Software: Rcpp; MULTIFAN-CL; JABBA; TMB; bookdown; RStudio; …
Main Fields: Statistics (62-XX); Game theory, economics, finance, and other social and behavioral sciences (91-XX)

CFL

Software Authors:   Field, A. J.; Kelly, P. H. J.; Hansen, T. L.
Cited in: 2 Publications (2001–2002)
Related Software:
Main Fields: Computer science (68-XX); Biology and other natural sciences (92-XX)

popReconstruct

Software Authors:   Wheldon, Mark C.; Raftery, Adrian E.; Clark, Samuel J.; Gerland, Patrick
Cited in: 1 Publication (2013)
Related Software: R; AlleleRetain; bayesLife; wpp2010; wpp2012; bayesTFR; …
Main Fields: Statistics (62-XX)

ppsim

Software Authors:   David Doty, Eric Severson
Cited in: 1 Publication (2021)
Related Software: StochKit2; GillesPy2; Jupyter; Python; StochKit; GitHub
Main Fields: Biology and other natural sciences (92-XX)

QBMMlib

Software Authors:   Spencer H. Bryngelson, Tim Colonius, Rodney O. Fox
Cited in: 1 Publication (2023)
Related Software: CHyQMOM; OpenQBMM; Fluidity; MFC; Mathematica
Main Fields: Numerical analysis (65-XX); Fluid mechanics (76-XX)

SimBiology

Software Authors:   MathWorks
Cited in: 2 Publications (2015–2016)
Related Software: Matlab; SAFE Toolbox; NbClust; MATLAB ODE suite; Optimization Toolbox; ode23s; …
Main Fields: Biology and other natural sciences (92-XX)

TESD

Software Authors:   Grégory Deceliere, Yann Letrillard, Sandrine Charles, Christian Biémont
Cited in: 1 Publication (2008)
Related Software:
Main Fields: Probability theory and stochastic processes (60-XX); Biology and other natural sciences (92-XX)

Aevol

Software Authors:   Bérénice Batut, David P Parsons, Stephan Fischer, Guillaume Beslon, Carole Knibbe
Cited in: 1 Publication (2016)
Related Software: INDELible; ALF; SimPhy
Main Fields: Biology and other natural sciences (92-XX)

BatTool

Software Authors:   Richard, A; Erickson, RA; Thogmartin, WE; Szymanski, JA
Cited in: 1 Publication (2018)
Related Software:
Main Fields: Biology and other natural sciences (92-XX); Mathematics education (97-XX)

Biosimware

Software Authors:   Besozzi, Daniela; Cazzaniga, Paolo; Mauri, Giancarlo; Pescini, Dario
Cited in: 0 Publications
Related Software:
Main Fields:

brkgaAPI

Software Authors:   Toso, R.F., Rezende, M.G.C.
Cited in: 1 Publication (2014)
Related Software: MersenneTwister; AIMMS; CPLEX
Main Fields: Operations research, mathematical programming (90-XX)

BSim

Software Authors:   Gorochowski, T.E., et al.
Cited in: 1 Publication (2022)
Related Software: GitHub; COPASI; BasiCO; MobsPy; BioNetGen; iBioSim; …
Main Fields: Biology and other natural sciences (92-XX)

ColorSims

Software Authors:   Sean Tauber; Gooyabadi, M.; Joe, K.
Cited in: 1 Publication (2021)
Related Software: clusfind; BayesPy; Silhouettes
Main Fields: Statistics (62-XX)

comomodels

Software Authors:   van der Vegt, Solveig A.; Dai, Liangti; Bouros, Ioana; Farm, Hui Jia; Creswell, Richard; Dimdore-Miles, Oscar; Cazimoglu, Idil; Bajaj, Sumali; Hopkins, Lyle; Seiferth, David; Cooper, Fergus; Lei, Chon Lok; Gavaghan, David; Lambert, Ben
Cited in: 1 Publication (2022)
Related Software: Plotly; R Markdown; ggplot2; R
Main Fields: Biology and other natural sciences (92-XX)

Compartor

Software Authors:   Pietzsch, T., Duso, L., Zechner, C.
Cited in: 0 Publications
Related Software: Catalyst.jl; MEANS; CERENA; ModelingToolkit.jl; DifferentialEquations.jl; Julia; …
Main Fields:

DiSCUS

Software Authors:   Goñi-Moreno, Angel; Amos, Martyn
Cited in: 0 Publications
Related Software:
Main Fields: Computer science (68-XX)

epiPOMS

Software Authors:   Touloupou, P.; Spencer, S. E. F.
Cited in: 1 Publication (2020)
Related Software: epiABC; R
Main Fields: Statistics (62-XX); Biology and other natural sciences (92-XX)

MultiGrain

Software Authors:   Hutchison, M.; Price, D. J.; Laibe, G.
Cited in: 1 Publication (2021)
Related Software: Splash
Main Fields: Partial differential equations (35-XX); Fluid mechanics (76-XX)

Neko

Software Authors:   Zixuan Zhao, Nathan Wycoff, Neil Getty, Rick Stevens, Fangfang Xia
Cited in: 0 Publications
Related Software: Brian; NxTF; NEST; SpikeCoding; Pynn; Nengo; …
Main Fields:

NQCDynamics.jl

Software Authors:   James Gardner, Oscar A. Douglas-Gallardo, Wojciech G. Stark, Julia Westermayr, Svenja M. Janke, Scott Habershon, Reinhard J. Maurer
Cited in: 0 Publications
Related Software: VENUS96; Unitful.jl; MLJ; Flux; SchNetPack; SchNet; …
Main Fields:

PUFoam

Software Authors:   Karimi, M.; Droghetti, H.; Marchisio, D. L.
Cited in: 1 Publication (2018)
Related Software: Aria
Main Fields: Numerical analysis (65-XX); Fluid mechanics (76-XX)

PyRates

Software Authors:   Gast R., Rose D., Salomon C., Möller H.E., Weiskopf N., Knösche T.R.
Cited in: 0 Publications
Related Software: Travis CI; Scikit; Matlab; UQLab; CUDA; muq; …
Main Fields:

set-membership estimation

Software Authors:   Widder, Andreas
Cited in: 1 Publication (2018)
Related Software:
Main Fields: Ordinary differential equations (34-XX); Calculus of variations and optimal control; optimization (49-XX); Operations research, mathematical programming (90-XX)

SIMID

Software Authors:   Lilia L. Ramírez-Ramírez, Yulia R. Gel, Mary Thompson, Eileen de Villa, Matt McPherson
Cited in: 1 Publication (2016)
Related Software:
Main Fields: Combinatorics (05-XX); Statistics (62-XX)

SimInf

Software Authors:   Stefan Widgren, Pavol Bauer, Stefan Engblom
Cited in: 0 Publications
Related Software: R; EpiModel; GillespieSSA; amei; GSL; URDME; …
Main Fields:

SiMRiv

Software Authors:   Lorenzo Quaglietta, Miguel Porto, Erida Gjini, Bob Harris
Cited in: 0 Publications
Related Software: kftrack; ukfsst; kfsst; trackit; acc; pawacc; …
Main Fields:

ss3sim

Software Authors:   Sean C. Anderson, Cole C. Monnahan, Kelli F. Johnson, Kotaro Ono, Juan L. Valero
Cited in: 0 Publications
Related Software: ggplot2; r4ss; R
Main Fields:

Toolbox-Romano

Software Authors:   Sebastián A. Romano, Verónica Pérez-Schuster, Adrien Jouary, Alessia Candeo, Jonathan Boulanger-Weill, Germán Sumbre
Cited in: 0 Publications
Related Software: SimpleElastix; ImageBee; CALIMA; DoOR; moco; ILTIS; …
Main Fields:

Treevolve

Software Authors:   Grassly, N.C., Harvey, P.H., Holmes, E.C.
Cited in: 1 Publication (2007)
Related Software:
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Biology and other natural sciences (92-XX)

twoWayGPBEFoam

Software Authors:   Li, Dongyue; Marchisio, Daniele; Hasse, Christian; Lucas, Dirk
Cited in: 1 Publication (2020)
Related Software: OpenFOAM
Main Fields: Fluid mechanics (76-XX); Statistical mechanics, structure of matter (82-XX)

UnstableManifoldCompactMap

Software Authors:   Mireles-James, J.D.
Cited in: 1 Publication (2017)
Related Software: INTLAB; Matlab
Main Fields: Ordinary differential equations (34-XX); Dynamical systems and ergodic theory (37-XX); Numerical analysis (65-XX)

CatDyn

Software Authors:   Ruben H. Roa-Ureta
Cited in: 0 Publications
Related Software:
Main Fields: