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Found 125 Software Packages (Results 1–100)

GOLEM

Software Authors:   S. Muggleton; C. Feng
Cited in: 36 Publications (1991–2022)
Related Software: FOIL; Aleph; Metaopt; Metagol; GitHub; C4.5; …
Main Fields:

DrugBank

Software Authors:   Wishart, D. S.; Knox, C.; Guo, A. C.; Cheng, D.; Shrivastava, S.; Tzur, D.; Gautam, B.; Hassanali, M.
Cited in: 17 Publications (2010–2022)
Related Software: KEGG; ChEMBL; Cytoscape; BLAST; PSI-BLAST; GitHub; …
Main Fields:

RAPTOR

Software Authors:   Xu, J.; Li, M.; Lin, G.; Kim, D.; Xu, Y.
Cited in: 15 Publications (2002–2021)
Related Software: GenThreader; CPLEX; BLAST; PSI-BLAST; FUGUE; GreedyBB; …
Main Fields:

I-TASSER

Software Authors:   A. Roy, A. Kucukural, Y. Zhang
Cited in: 14 Publications (2012–2022)
Related Software: BLAST; PSI-BLAST; CHARMM; MODELLER; SWISS-MODEL; PROCHECK; …
Main Fields:

PSIPRED

Software Authors:   Mcguffin, L. J.; Bryson, K.; Jones, D. T.
Cited in: 8 Publications (2004–2021)
Related Software: MODELLER; BLAST; PSI-BLAST; PROCHECK; MUSCLE; MUFold-SSW; …
Main Fields:

ExPASy

Software Authors:   Gasteiger, E.; Gattiker, A.; Hoogland, C.; Ivanyi, I.; Appel, R. D.; Bairoch, A
Cited in: 10 Publications (2006–2020)
Related Software: MODELLER; BLAST; PSI-BLAST; R; UniProt; PROCHECK; …
Main Fields:

SMMP

Software Authors:   Jan H. Meinke, Sandipan Mohanty, Frank Eisenmenger, Ulrich H.E. Hansmann
Cited in: 12 Publications (1995–2010)
Related Software: ARVO; CAVE; SURFNET; VADAR; Python; PyMOL; …
Main Fields: (82-08-XX); (82D60-XX); (92C40-XX)

MAMMOTH

Software Authors:   Ortiz, A.R.; Strauss, C.E.M.; Olmea, O.
Cited in: 8 Publications (2008–2017)
Related Software: TM-align; BLAST; PSI-BLAST; DIAL; Qhull; ConSeq; …
Main Fields:

PREvaIL

Software Authors:   Song, Jiangning; Li, Fuyi; Takemoto, Kazuhiro; Haffari, Gholamreza; Akutsu, Tatsuya; Chou, Kuo-Chen; Webb, Geoffrey I.
Cited in: 10 Publications (2018–2019)
Related Software: iDNA6mA-PseKNC; iRNA-PseColl; pLoc-mAnimal; 2L-piRNA; iPromoter-2L; iRSpot-EL; …
Main Fields: Biology and other natural sciences (92-XX)

COMPASS

Software Authors:   Sadreyev R, Grishin N
Cited in: 3 Publications (2006–2017)
Related Software: PSI-BLAST; BLAST; ClustalW; Pfam; TM-align; FASTA; …
Main Fields:

FoldX

Software Authors:   Schymkowitz J., Borg J., Stricher F., Nys R., Rousseau F., Serrano L.
Cited in: 7 Publications (2007–2016)
Related Software: PoPMuSiC; CHARMM; ProTherm; SIB-BLAST; PUDGE; PAComplex; …
Main Fields:

JPred

Software Authors:   Cuff JA, Clamp ME, Siddiqui AS, Finlay M, Barton GJ
Cited in: 2 Publications (2004)
Related Software: BLAST; PSI-BLAST; ProtVec; ACCpro; GitHub; SSpro; …
Main Fields:

MaxSub

Software Authors:   Naomi Siew, Arne Elofsson, Leszek Rychlewski, Daniel Fischer
Cited in: 2 Publications (2008–2013)
Related Software: MODELLER; PROCHECK; BLAST; PSI-BLAST; GenThreader; Pfam; …
Main Fields:

GeneScout

Software Authors:   Yin, Michael M.; Wang, Jason T.L
Cited in: 3 Publications (2007–2009)
Related Software: iPiG; KNIME; MyriMatch; Peppy; PGTools; PGx; …
Main Fields:

HHpred

Software Authors:   J. Söding, A. Biegert, A. Lupas
Cited in: 3 Publications (2014–2018)
Related Software: Pfam; BioGRID; PSI-BLAST; ARACNE; KEGG; minet; …
Main Fields:

OXBench

Software Authors:   Raghava GPS, Searle SMJ, Audley PC, Barber JD, Barton GJ
Cited in: 5 Publications (2008–2017)
Related Software: ClustalW; SABmark; MUSCLE; MrBayes; Mauve; Kalign; …
Main Fields:

PSICOV

Software Authors:   David T. Jones, Daniel W. A. Buchan, Domenico Cozzetto, Massimiliano Pontil
Cited in: 6 Publications (2014–2021)
Related Software: R; Pfam; BLAST; PSI-BLAST; NNcon; bnlearn; …
Main Fields:

QMEAN

Software Authors:   P. Benkert, M. Kunzli, T. Schwede
Cited in: 2 Publications (2014–2017)
Related Software: SWISS-MODEL; PROCHECK; MODELLER; VaxiJen; I-TASSER; Bcepred; …
Main Fields:

InterPreTS

Software Authors:   Aloy, P.; Russell, RB
Cited in: 4 Publications (2011–2019)
Related Software: PIPE; MCODE; DIMA; STRING; PreSPI; LIBSVM; …
Main Fields:

NNcon

Software Authors:   Allison N. Tegge, Zheng Wang, Jesse Eickholt, Jianlin Cheng
Cited in: 3 Publications (2011–2016)
Related Software: PSICOV; Ontobee; PlantTFDB; eggNOG; ELM; dbCAN; …
Main Fields:

PFRES

Software Authors:   Chen K, Kurgan L.
Cited in: 5 Publications (2009–2019)
Related Software: LIBSVM; Cell-PLoc; ProLanGO; QAcon; iNuc-STNC; iPhos-PseEn; …
Main Fields:

PIPE

Software Authors:   Pitre, S.; Dehne, F.; Chan, A.; Cheetham, J.; Duong, A.; Emili, A.; Gebbia, M.; Greenblatt, J.; Jessulat, M.; Krogan, N.; Luo, X.; Golshani, A.
Cited in: 1 Publication (2011)
Related Software: InterPreTS; LIBSVM; Cd-hit; Negatome; DIMA; Hum-PLoc; …
Main Fields:

PROFcon

Software Authors:   Marco Punta, Burkhard Rost
Cited in: 3 Publications (2007–2022)
Related Software: SODOCK; PROFEAT; PseAAC; MODELLER; FT-COMAR; QMEAN; …
Main Fields:

PSNO

Software Authors:   Zhang, J.; Zhao, X.; Sun, P.; Ma, Z.
Cited in: 6 Publications (2015–2019)
Related Software: iHyd-PseAAC; iNitro-Tyr; iSNO-PseAAC; iMethyl-PseAAC; pLoc-mHum; iRNA-2methyl; …
Main Fields:

SCPRED

Software Authors:   Lukasz Kurgan; Krzysztof Cios; Ke Chen
Cited in: 4 Publications (2009–2014)
Related Software: LogitBoost; PSI-BLAST; BLAST; MemHyb; Cascleave; E-DRAGON; …
Main Fields:

PRED-CLASS

Software Authors:   Pasquier C, Promponas VJ, Hamodrakas SJ
Cited in: 3 Publications (2008–2012)
Related Software: SVMlight; SLEX; BLAST; PSI-BLAST; SWIFT; AAindex; …
Main Fields:

PROMALS

Software Authors:   Pei, Jimin; Kim, Bong-Hyun; Tang, Ming; Grishin, Nick V
Cited in: 3 Publications (2011–2013)
Related Software: Kalign; MUSCLE; PCMA; T-coffee; ProtTest 3; iGTP; …
Main Fields:

RSARF

Software Authors:   Pugalenthi, G.; Kandaswamy, K. K.; Kolatkar, P.
Cited in: 5 Publications (2012–2019)
Related Software: AFP-Pred; iDNA-Prot; iLoc-Virus; iMiRNA-PseDPC; iHyd-PseAAC; iNitro-Tyr; …
Main Fields: Statistics (62-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)

DOMpro

Software Authors:   J. L. Cheng, M. J. Sweredoski, P. Baldi
Cited in: 3 Publications (2011–2020)
Related Software: UProC; LIBSVM; Scikit; Mathematica; I-TASSER; SW1PerS; …
Main Fields:

HOPE

Software Authors:   Dunlavy, D. M.; O’Leray, D. P.; Klimov D. Thirumalai, D.
Cited in: 4 Publications (2010–2020)
Related Software: astsa; MULTIMIX
Main Fields:

PatchDock

Software Authors:   Schneidman-Duhovny, D.; Inbar, Y.; Nussinov, R.; Wolfson, H. J.
Cited in: 2 Publications (2015–2019)
Related Software: PacthDock; YASARA; VADAR; DFSA; DDFSA; AutoDock; …
Main Fields:

PLMLA

Software Authors:   Shi, S. P.; Qiu, J. D.; Sun, X. Y.
Cited in: 4 Publications (2012–2019)
Related Software: Cd-hit; iSNO-PseAAC; iHyd-PseAAC; EnsemblePail; iNitro-Tyr; Cell-PLoc; …
Main Fields:

PoPMuSiC

Software Authors:   Yves Dehouck, Jean Marc Kwasigroch, Dimitri Gilis, Marianne Rooman
Cited in: 3 Publications (2012–2016)
Related Software: FoldX; Jmol; CHARMM; AUTO-MUTE; CUPSAT; SIB-BLAST; …
Main Fields:

Porter

Software Authors:   Gianluca Pollastri, Aoife McLysaght
Cited in: 4 Publications (2009–2016)
Related Software: Cell-PLoc; iLoc-Plant; Euk-mPLoc; SecretP; AFP-Pred; iLoc-Euk; …
Main Fields:

BetaSCP

Software Authors:   Ryu, Joonghyun; Kim, Deok-Soo
Cited in: 3 Publications (2013–2017)
Related Software: TM-align; ARIA; CANDID; CYANA; QTFier; RASP; …
Main Fields: Computer science (68-XX); Operations research, mathematical programming (90-XX)

CUPSAT

Software Authors:   Vijaya Parthiban, M. Michael Gromiha, Dietmar Schomburg
Cited in: 2 Publications (2012–2016)
Related Software: PoPMuSiC; AUTO-MUTE; Ontobee; PlantTFDB; eggNOG; ELM; …
Main Fields:

DeepGO

Software Authors:   Maxat Kulmanov, Mohammed Asif Khan, Robert Hoehndorf
Cited in: 3 Publications (2021–2022)
Related Software: NetGO; Tensor2Tensor; COFACTOR; DeepGOPlus; QAUST; ProTranslator; …
Main Fields:

DISOPRED

Software Authors:   Jonathan J. Ward, Liam J. McGuffin, Kevin Bryson, Bernard F. Buxton, David T. Jones
Cited in: 3 Publications (2008–2018)
Related Software: IUPred; GlobPlot; DNdisorder; FoldIndex; ROCR; NETASA; …
Main Fields:

DNdisorder

Software Authors:   Jesse Eickholt, Jianlin Cheng
Cited in: 3 Publications (2016–2021)
Related Software: DISOPRED; MultiMin; SketchyGAN; CyCADA; AutoAugment; AlexNet; …
Main Fields:

FORESST

Software Authors:   Di Francesco V, Munson PJ, Garnier J.
Cited in: 2 Publications (2006–2009)
Related Software: DINAMelt; Hum-PLoc; Signal-CF; ToMoCoMD-CARDD; Cell-PLoc; STATISTICA; …
Main Fields:

Fu-SulfPred

Software Authors:   Wang, Lidong; Zhang, Ruijun; Mu, Yashuang
Cited in: 3 Publications (2019)
Related Software: iHyd-PseAAC; 2L-piRNA; iDNA6mA-PseKNC; iRNA-PseU; iPromoter-2L; iRSpot-EL; …
Main Fields: (92C40-XX); (92D20-XX); (92-08-XX)

HHblits

Software Authors:   Remmert M, Biegert A, Hauser A, Söding J
Cited in: 3 Publications (2016–2022)
Related Software: MUSCLE; UniProt; T-coffee; ClustalW; DIALIGN; SPAdes; …
Main Fields:

HSEpred

Software Authors:   Song J, Tan H, Takemoto K, Akutsu T
Cited in: 1 Publication (2011)
Related Software: InterPreTS; Negatome; PIPE; DIMA; Hum-PLoc; Hum-mPLoc; …
Main Fields:

NETASA

Software Authors:   Ahmad, S.; Gromiha, M. M.
Cited in: 3 Publications (2005–2018)
Related Software: RBSURFpred; OnD-CRF; Hum-mPLoc; Euk-mPLoc; iRSpot-EL; iRNA-PseColl; …
Main Fields:

Paircoil2

Software Authors:   A. V. McDonnell, T. Jiang, A. E. Keating, B. Berger
Cited in: 2 Publications (2007–2017)
Related Software: InterPreTS; SOCKET; HIPPIE; STRING; UniProt; MUSCLE; …
Main Fields:

PFCorr

Software Authors:   Bajaj, Chandrajit; Bauer, Benedikt; Bettadapura, Radhakrishna; Vollrath, Antje
Cited in: 3 Publications (2013–2021)
Related Software: NFFT3; LORM; MTEX; Chebfun2; Chebfun; F2Dock; …
Main Fields: (92E10-XX); (65T50-XX)

APOLLO

Software Authors:   Zheng Wang, Jesse Eickholt, Jianlin Cheng
Cited in: 1 Publication (2016)
Related Software: Ontobee; PlantTFDB; eggNOG; ELM; dbCAN; antiSMASH; …
Main Fields:

ArchPRED

Software Authors:   N. Fernandez-Fuentes, J. Zhai, A. Fiser
Cited in: 1 Publication (2014)
Related Software: SIRENE; UniProt; WebGestalt; KDDONTO; Protege; GeoSVM; …
Main Fields:

AWSEM-MD

Software Authors:   Aram Davtyan, Nicholas P Schafer, Weihua Zheng, Cecilia Clementi, Peter G Wolynes, Garegin A Papoian
Cited in: 2 Publications (2017–2018)
Related Software: COCOMAPS; Frustratometer; Ace; ProTherm
Main Fields:

bamboo

Software Authors:   Li Q, Dahl DB, Vannucci M, Hyun Joo, Tsai JW
Cited in: 0 Publications
Related Software: shallot; rscala; CRAN; MLlib; SparkR; sparklyr; …
Main Fields:

CompaRNA

Software Authors:   Tomasz Puton, Lukasz P. Kozlowski, Kristian M. Rother, Janusz M. Bujnicki
Cited in: 2 Publications (2015)
Related Software: RNAalifold; CentroidAlifold; MARNA; iLoc-Euk; TurboFold; EMBOSS; …
Main Fields:

CONCORD

Software Authors:   Wei, Y.; Thompson, J.; Floudas, C.A.
Cited in: 2 Publications (2012)
Related Software: BLAST; PSI-BLAST; Mfold; CASP9
Main Fields: Operations research, mathematical programming (90-XX); Biology and other natural sciences (92-XX)

CyclinPred

Software Authors:   Kalita, M. K.; Nandal, U. K.; Pattnaik, A.; Sivalingam, A.; Ramasamy, G.; Kumar, M.; Raghava, G. P.; Gupta, D.
Cited in: 2 Publications (2016–2021)
Related Software: UniProt; PseAAC; iRSpot-GAEnsC; PseAAC-General; iSS-Hyb-mRMR; iPPI-Esml; …
Main Fields:

DCMOGADES

Software Authors:   Okuda, Tamaki; Hiroyasu, Tomoyuki; Miki, Mitsunori; Kamiura, Jiro; Watanabe, Shinaya
Cited in: 2 Publications (2002–2005)
Related Software: MOGADES; SPEA2
Main Fields: (90C29-XX); (90C59-XX); (68T05-XX)

DORAEMON

Software Authors:   Pai, Priyadarshini P.; Dash, Tirtharaj; Mondal, Sukanta
Cited in: 2 Publications (2017–2019)
Related Software: BLAST; PSI-BLAST; EMBOSS; NPInter; Prnam-PC; PINGU; …
Main Fields: (92C40-XX); (62P10-XX)

GalaxySite

Software Authors:   Heo, L.; Shin, W. H.; Lee, M. S.; Seok, C
Cited in: 2 Publications (2018)
Related Software: SODOCK; GalaxyDock; DockingApp; DeepVS; VMD; AutoDock Vina; …
Main Fields:

Gene3D

Software Authors:   Yeats C et al
Cited in: 1 Publication (2017)
Related Software: SeqVis; CodonPhyML; jModelTest; DensiTree; ProtTest 3; REGANOR; …
Main Fields:

iMembrane

Software Authors:   S. Kelm, J. Shi, C.M. Deane
Cited in: 1 Publication (2014)
Related Software: SIRENE; UniProt; WebGestalt; KDDONTO; Protege; GeoSVM; …
Main Fields:

LEON

Software Authors:   Thompson, J.D., Prigent, V., Poch, O.
Cited in: 1 Publication (2017)
Related Software: UniProt; Opal; RASCAL; GUIDANCE2; Probalign; PCMA; …
Main Fields:

MeDor

Software Authors:   Philippe Lieutaud, Bruno Canard, Sonia Longh
Cited in: 1 Publication (2016)
Related Software: IUPred; Ontobee; PlantTFDB; eggNOG; ELM; dbCAN; …
Main Fields:

MIGenAS

Software Authors:   Rampp M, Soddemann T, Lederer H
Cited in: 0 Publications
Related Software: BLAST; PSI-BLAST; ClustalW; bioperl; CAP3
Main Fields:

MIND-BEST

Software Authors:   Humberto González-Díaz, Francisco Prado-Prado, Xerardo García-Mera, et. al.
Cited in: 2 Publications (2014–2016)
Related Software: PISCES; PRMLT; SMOTE; MARCH-INSIDE; AmiGO; WEKA; …
Main Fields:

MULTICOM

Software Authors:   Zheng Wang; Jesse Eickholt; Jianlin Cheng
Cited in: 1 Publication (2014)
Related Software: FT-COMAR; AAindex; BLAST; PSI-BLAST; I-TASSER; NNcon; …
Main Fields:

N-SCAN

Software Authors:   Gross, Samuel S.; Brent, Michael R.
Cited in: 2 Publications (2005–2013)
Related Software: PromoterExplorer; BacPP; OligoPred; iLoc-Euk; iLoc-Hum; PseAAC-Builder; …
Main Fields: (92C40-XX); (92-08-XX)

NL MIND-BEST

Software Authors:   García-Mera, Xerardo; Tapia, Ricardo A.; Ubeira, Florencio M.
Cited in: 2 Publications (2011–2013)
Related Software: Cell-PLoc; NR-2L; OligoPred; SecretP; iLoc-Virus; GPCR-CA; …
Main Fields: Biology and other natural sciences (92-XX)

PONDR-FIT

Software Authors:   Bin Xue, Roland L. Dunbrack, Robert W. Williams, Keith Dunker, Vladimir N. Uversky
Cited in: 2 Publications (2011–2016)
Related Software: PyMOL; GOLD; MPRAP; BLAST; PSI-BLAST; svmPRAT; …
Main Fields:

PPI_SVM

Software Authors:   Chatterjee, P.; Basu, S.; Kundu, M., Nasipuri M, Plewczynski D.
Cited in: 2 Publications (2019)
Related Software: GitHub; DeepPPI; AlexNet; Adam; ImageNet; darch; …
Main Fields:

PreDisorder

Software Authors:   Xin Deng, Jesse Eickholt, Jianlin Cheng
Cited in: 1 Publication (2016)
Related Software: Ontobee; PlantTFDB; eggNOG; ELM; dbCAN; antiSMASH; …
Main Fields:

PreSSAPro

Software Authors:   Costantini, Susan; Colonna, Giovanni; Facchiano, Angelo M.
Cited in: 1 Publication (2007)
Related Software: PSIPRED; SOM
Main Fields: Biology and other natural sciences (92-XX)

PUDGE

Software Authors:   Norel R., Petrey D., Honig B.
Cited in: 1 Publication (2013)
Related Software: SIB-BLAST; FoldX; PAComplex; HexServer; SAWTED; PSI-BLAST; …
Main Fields:

PyRosetta

Software Authors:   Chaudhury, S.; Lyskov, S.; Gray, J.
Cited in: 1 Publication (2018)
Related Software: STRIDE
Main Fields:

RASP

Software Authors:   Miao Z., Cao Y., Jiang T.
Cited in: 2 Publications (2013)
Related Software: Lolli; ASP; QTFier; SCWRL4; BetaSCP; CHARMM; …
Main Fields:

siteFiNDER 3D

Software Authors:   C. Axel Innis
Cited in: 1 Publication (2011)
Related Software: VMD; Rate4Site; BLAST; PSI-BLAST; Seq-Gen
Main Fields:

SNPeffect

Software Authors:   G. de Baets, J. van Durme, J. Reumers et al.
Cited in: 2 Publications (2012–2020)
Related Software: StSNP; PharmGKB; DrugscorePPI; COILCHECK; SNPs3D; FoldX; …
Main Fields:

SOCKET

Software Authors:   Walshaw, J.; Woolfson, D.N.
Cited in: 2 Publications (2008–2017)
Related Software: InterPreTS; Paircoil2; HIPPIE; STRING; UniProt; MUSCLE; …
Main Fields:

SOLpro

Software Authors:   Magnan, C. N.; Randall, A.; Baldi, P.
Cited in: 1 Publication (2014)
Related Software: MODELLER; ExPASy; Frustratometer; PAComplex; JCat; PROCHECK; …
Main Fields:

SPIDER2

Software Authors:   Yang, Y.; Heffernan, R.; Paliwal, K.; Lyons, J.; Dehzangi, A.; Sharma, A.; Wang, J.; Sattar, A.; Zhou, Y
Cited in: 2 Publications (2017–2019)
Related Software: COMPARTMENTS; BioGRID; Virus-ploc; GitHub; UniProt; Gpos-PLoc; …
Main Fields:

SSpro

Software Authors:   Christophe N. Magnan, Pierre Baldi
Cited in: 1 Publication (2016)
Related Software: ProtVec; ACCpro; JPred; GitHub; Keras; Python; …
Main Fields:

StrBioLib

Software Authors:   John-Marc Chandonia
Cited in: 1 Publication (2016)
Related Software: Ontobee; PlantTFDB; eggNOG; ELM; dbCAN; antiSMASH; …
Main Fields:

ACCpro

Software Authors:   Christophe N. Magnan, Pierre Baldi
Cited in: 0 Publications
Related Software: ProtVec; JPred; GitHub; SSpro; Keras; Python
Main Fields:

BetaSCP2

Software Authors:   Ryu, Joonghyun; Lee, Mokwon; Cha, Jehyun; Song, Chanyoung; Kim, Deok-Soo
Cited in: 1 Publication (2014)
Related Software: BULL!; SCWRL4; CHARMM; CPLEX
Main Fields: (65Yxx-XX); (68W30-XX)

BetaSCPWeb

Software Authors:   Joonghyun Ryu, Mokwon Lee, Jehyun cha, Roman A. Laskowski, Seong Eon Ryu, Deok-Soo Kim
Cited in: 1 Publication (2016)
Related Software: QTFier; BetaConcept; BetaVoid; CAVER; packomania; VRONI; …
Main Fields:

BETAWARE

Software Authors:   Castrense Savojardo, Piero Fariselli, Rita Casadio
Cited in: 1 Publication (2015)
Related Software: OP-ELM
Main Fields:

CASP9

Software Authors:   University of California, Davis
Cited in: 1 Publication (2012)
Related Software: CONCORD
Main Fields: Operations research, mathematical programming (90-XX); Biology and other natural sciences (92-XX)

ccSVM

Software Authors:   Limin Li; Barbara Rakitsch; Karsten Borgwardt
Cited in: 1 Publication (2017)
Related Software: Eigenstrat; DREBIN
Main Fields:

CODA

Software Authors:   C.M. Deane, T.L. Blundell
Cited in: 1 Publication (2014)
Related Software: SIRENE; UniProt; WebGestalt; KDDONTO; Protege; GeoSVM; …
Main Fields:

CONFOLD

Software Authors:   B Adhikari, D Bhattacharya, et. al.
Cited in: 1 Publication (2016)
Related Software: Ontobee; PlantTFDB; eggNOG; ELM; dbCAN; antiSMASH; …
Main Fields:

Conrad

Software Authors:   DeCaprio D, Vinson JP, Pearson MD, Mon- tgomery P, Doherty M, Galagan JE
Cited in: 1 Publication (2017)
Related Software: SeqVis; CodonPhyML; jModelTest; DensiTree; ProtTest 3; REGANOR; …
Main Fields:

DeepQA

Software Authors:   Renzhi Cao, Debswapna Bhattacharya, Jie Hou, Jianlin Cheng
Cited in: 1 Publication (2019)
Related Software: ProLanGO; QAcon; PFRES; iNuc-STNC; iPhos-PseEn; iPPBS-Opt; …
Main Fields:

3DIGARS

Software Authors:   Mishra, Avdesh; Iqbal, Sumaiya; Hoque, Md Tamjidul
Cited in: 1 Publication (2016)
Related Software: iDNA-Methyl; iNitro-Tyr; iCTX-Type; iRSpot-PseDNC; iPPI-Esml; iPro54-PseKNC; …
Main Fields: (92D20-XX); (92E10-XX); (92-04-XX)

DUET

Software Authors:   Douglas E.V. Pires, David B. Ascher, Tom L. Blundell
Cited in: 1 Publication (2016)
Related Software: Ontobee; PlantTFDB; eggNOG; ELM; dbCAN; antiSMASH; …
Main Fields:

FASTSP

Software Authors:   Siavash Mirarab, Tandy Warnow
Cited in: 1 Publication (2013)
Related Software: ProtTest 3; iGTP; MrBayes; Gegenees; POY; MLTreeMap; …
Main Fields:

FoldRec-C2C

Software Authors:   Jiangyi Shao, Ke Yan, Bin Liu
Cited in: 1 Publication (2021)
Related Software: iBLP; Deep4mC; iDNA-MS; PSAC; iTerm-PseKNC; RAACBook; …
Main Fields:

FreeContact

Software Authors:   –
Cited in: 1 Publication (2016)
Related Software: Ontobee; PlantTFDB; eggNOG; ELM; dbCAN; antiSMASH; …
Main Fields:

GPMAW

Software Authors:   S. Peri, H. Steen, A. Pandey
Cited in: 0 Publications
Related Software: SOS; polyxmass
Main Fields:

IDP-Seq2Seq

Software Authors:   Y. J. Tang, Y. H. Pang, B. Liu
Cited in: 1 Publication (2021)
Related Software: iBLP; Deep4mC; iDNA-MS; PSAC; FoldRec-C2C; iTerm-PseKNC; …
Main Fields:

LIBRUS

Software Authors:   C. Kauffman, G. Karypis
Cited in: 0 Publications
Related Software:
Main Fields:

LncADeep

Software Authors:   Cheng Yang, Longshu Yang, Man Zhou, Haoling Xie, Chengjiu Zhang, May D Wang, Huaiqiu Zhu
Cited in: 1 Publication (2019)
Related Software: GitHub; DeepWalk; LncDisease; node2vec; starBase; ncPred; …
Main Fields:

LOOPER

Software Authors:   V.Z. Spassov, P.K. Flook, L. Yan
Cited in: 1 Publication (2014)
Related Software: SIRENE; UniProt; WebGestalt; KDDONTO; Protege; GeoSVM; …
Main Fields:

MAESTRO

Software Authors:   Josef Laimer, Heidi Hofer, Marko Fritz, Stefan Wegenkittl, Peter Lackner
Cited in: 1 Publication (2016)
Related Software: Ontobee; PlantTFDB; eggNOG; ELM; dbCAN; antiSMASH; …
Main Fields: