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Found 53 Software Packages (Results 1–53)

Nek5000

Software Authors:   Peplinski, A.; Schlatter, P.; Fischer, P.F.; Henningson, D.S.
Cited in: 160 Publications (2010–2023)
Related Software: Nektar++; SIMSON; Gmsh; FreeFem++; OpenFOAM; PyFR; …
Main Fields: Partial differential equations (35-XX); Dynamical systems and ergodic theory (37-XX); Numerical analysis (65-XX)

BLAT

Software Authors:   W. James Kent
Cited in: 22 Publications (2005–2022)
Related Software: Soap; PatternHunter; PSI-BLAST; BLAST; BLASTZ; AVID; …
Main Fields: General and overarching topics; collections (00-XX); Probability theory and stochastic processes (60-XX); Statistics (62-XX)

SAFE Toolbox

Software Authors:   F. Pianosi, F. Sarrazin, T. Wagener
Cited in: 11 Publications (2016–2022)
Related Software: SALib; sensitivity; R; Matlab; deSolve; UQLab; …
Main Fields: Ordinary differential equations (34-XX); Partial differential equations (35-XX); Probability theory and stochastic processes (60-XX)

MINMOD

Software Authors:   Pacini G, Bergman RN
Cited in: 14 Publications (2003–2021)
Related Software: SolvOpt; SCS Toolbox; CHOLMOD; plfit; PLASMA; MAGMA; …
Main Fields: Ordinary differential equations (34-XX); Probability theory and stochastic processes (60-XX); Statistics (62-XX)

TileMap

Software Authors:   Ji, H. and Wong, W. A.
Cited in: 10 Publications (2006–2012)
Related Software: R; sma; vsn; FindPeaks; ChIPOTle; GENEVESTIGATOR; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Numerical analysis (65-XX)

FATODE

Software Authors:   Zhang, Hong; Sandu, Adrian
Cited in: 9 Publications (2014–2023)
Related Software: MATLODE; DifferentialEquations.jl; CasADi; FEniCS; SUNDIALS; revolve; …
Main Fields: Partial differential equations (35-XX); Calculus of variations and optimal control; optimization (49-XX); Statistics (62-XX)

ooDACE

Software Authors:   Couckuyt, Ivo; Dhaene, Tom; Demeester, Piet
Cited in: 11 Publications (2014–2021)
Related Software: EGO; SUMO; DACE; DiceKriging; GPML; SMS-EMOA; …
Main Fields: Calculus of variations and optimal control; optimization (49-XX); Statistics (62-XX); Numerical analysis (65-XX)

gvlma

Software Authors:   Peña, Edsel A.; Slate, Elizabeth H.
Cited in: 6 Publications (2006–2022)
Related Software: R; frm; auditor; autoplotly; corrgram; lumberjack; …
Main Fields: Statistics (62-XX); Operations research, mathematical programming (90-XX); Game theory, economics, finance, and other social and behavioral sciences (91-XX)

BUQO

Software Authors:   Repetti, Audrey; Pereyra, Marcelo; Wiaux, Yves
Cited in: 6 Publications (2019–2022)
Related Software: DnCNN; BSDS; UNLocBoX; Noise2Noise; FFDNet; BayesDA; …
Main Fields: Calculus of variations and optimal control; optimization (49-XX); Statistics (62-XX); Numerical analysis (65-XX)

CARAT

Software Authors:   Huang J, Wei W, Chen J, Zhang J, Liu G, Di X, Mei R, Ishikawa S, Aburatani H, Jones K W, et al.
Cited in: 4 Publications (2008–2011)
Related Software: PLASQ; R; PICNIC; PennCNV; BRLMM; oligo; …
Main Fields: Statistics (62-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)

FlowDroid

Software Authors:   Arzt, S., Rasthofer, S., Fritz, C., Bodden, E., Bartel, A., Klein, J., Le Traon, Y., Octeau, D., McDaniel, P.
Cited in: 5 Publications (2015–2021)
Related Software: TAJ; Dytan; TaintDroid; MCGP; FlashMeta; FlashRelate; …
Main Fields: Computer science (68-XX); Information and communication theory, circuits (94-XX)

PeriPy

Software Authors:   B. Boys, T. J. Dodwell, M. Hobbs, M. Girolami
Cited in: 5 Publications (2021–2022)
Related Software: Peridigm; ParaView; SciPy; LAMMPS; Python; HPX; …
Main Fields: Numerical analysis (65-XX); Mechanics of deformable solids (74-XX)

MethylSig

Software Authors:   Park, Y., M. E. Figueroa, L. S. Rozek, M. A. Sartor
Cited in: 5 Publications (2016–2022)
Related Software: BSmooth; HMM-Fisher; MOABS; HMM-DM; Bisulfighter; methylKit; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Biology and other natural sciences (92-XX)

MiPred

Software Authors:   Jiang, P., Wu, H., Wang, W., Ma, W., Sun, X., Lu, Z.
Cited in: 3 Publications (2010–2018)
Related Software: MiRFinder; miRBase; starBase; ROAST; Velvet; ARACHNE; …
Main Fields: General and overarching topics; collections (00-XX); Statistics (62-XX); Computer science (68-XX)

PreSPI

Software Authors:   D.S. Han, H.S. Kim, W.H. Jang, S.D. Lee, J.K. Suh
Cited in: 3 Publications (2008–2019)
Related Software: InterPreTS; MCODE; BioGRID; CFinder; UniProt; KEGG; …
Main Fields: General and overarching topics; collections (00-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)

DeepLOB

Software Authors:   Zhang, Zihao; Zohren, Stefan; Roberts, Stephen
Cited in: 4 Publications (2019–2022)
Related Software: Adam; TensorFlow; DGM; torchsde; Transformer-XL; BoTorch; …
Main Fields: Computer science (68-XX); Game theory, economics, finance, and other social and behavioral sciences (91-XX); Systems theory; control (93-XX)

COVID-CAPS

Software Authors:   Parnian Afshar, Shahin Heidarian, Farnoosh Naderkhani, Anastasia Oikonomou, Konstantinos N. Plataniotis, Arash Mohammadi
Cited in: 0 Publications
Related Software: CovXNet; COVID-Net; GitHub; Xception; AlexNet; Grad-CAM; …
Main Fields:

DChaos

Software Authors:   Julio E. Sandubete, Lorenzo Escot
Cited in: 3 Publications (2020–2022)
Related Software: TISEAN; XPPAUT; AUTO-07P
Main Fields: Partial differential equations (35-XX); Dynamical systems and ergodic theory (37-XX); Statistics (62-XX)

EFICAz

Software Authors:   Weidong Tian, Adrian K. Arakaki, Jeffrey Skolnick
Cited in: 1 Publication (2011)
Related Software: UniProt; PathBLAST; BLAST; PSI-BLAST; KEGG; MUSCLE; …
Main Fields: Biology and other natural sciences (92-XX)

HydroGen

Software Authors:   De Corte, A; Sörensen, K
Cited in: 3 Publications (2018–2021)
Related Software: EPANET; Tabu search; LabVIEW; NHDPlus; HELICS; DMNetwork; …
Main Fields: Numerical analysis (65-XX); Operations research, mathematical programming (90-XX)

iSS-Hyb-mRMR

Software Authors:   Iqbal, M.; Hayat, M.
Cited in: 3 Publications (2016–2018)
Related Software: iPPI-Esml; iRSpot-TNCPseAAC; Pse-in-One; iNuc-PseKNC; 2L-piRNA; iDNA6mA-PseKNC; …
Main Fields: Statistics (62-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)

rSW-seq

Software Authors:   T.M. Kim, L.J. Luquette, R. Xi, P.J. Park
Cited in: 3 Publications (2016–2017)
Related Software: CNV-seq; SeqBBS; ReadDepth
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Biology and other natural sciences (92-XX)

SensitivityCaseControl

Software Authors:   Dylan Small
Cited in: 3 Publications (2013–2020)
Related Software: evidenceFactors; DOS; R
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Biology and other natural sciences (92-XX)

accuracy

Software Authors:   Micah Altman; Jeff Gill; Michael McDonald
Cited in: 1 Publication (2009)
Related Software: R; GENALG; gafit; rgenoud; Bhat; gmp; …
Main Fields: Statistics (62-XX)

CopulaDTA

Software Authors:   Victoria N Nyaga
Cited in: 1 Publication (2022)
Related Software: R; JAGS; CopulaREMADA; Stan; copula; copula
Main Fields: Statistics (62-XX)

functionalmf

Software Authors:   Tansey, Wesley; Tosh, Christopher; Blei, David M.
Cited in: 2 Publications (2022)
Related Software: pyhrt; DeepPINK; KnockoffGAN; GeneralisedCovarianceMeasure; conformalInference; QuickMMCTest
Main Fields: Statistics (62-XX)

ginSODA

Software Authors:   S.M. Nobile, P. Cazzaniga, D. Besozzi, G. Mauri
Cited in: 2 Publications (2021–2022)
Related Software: SUNDIALS; MPGOS; CUDA; Matlab; ode23s; ode113; …
Main Fields: Numerical analysis (65-XX)

HSROC

Software Authors:   Ian Schiller; Nandini Dendukuri
Cited in: 1 Publication (2012)
Related Software: SAS/STAT; bamdit; METADAS; R; Stata; JAGS; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Biology and other natural sciences (92-XX)

iLM-2L

Software Authors:   Ju, Zhe; Cao, Jun-Zhe; Gu, Hong
Cited in: 2 Publications (2015–2018)
Related Software: iNitro-Tyr; iSNO-AAPair; iMethyl-PseAAC; Pse-in-One; Prnam-PC; iLoc-lncRNA; …
Main Fields: Computer science (68-XX); Biology and other natural sciences (92-XX)

MOL

Software Authors:   Saucez, P.; Some, L.; Vande Wouwer, A.
Cited in: 2 Publications (2009–2012)
Related Software: Matlab; CWRESX; CWRESU; Algorithm 731; Differentiation Matrix Suite; bvp4c; …
Main Fields: Numerical analysis (65-XX)

PPI_SVM

Software Authors:   Chatterjee, P.; Basu, S.; Kundu, M., Nasipuri M, Plewczynski D.
Cited in: 2 Publications (2019)
Related Software: GitHub; DeepPPI; AlexNet; Adam; ImageNet; darch; …
Main Fields: Computer science (68-XX); Biology and other natural sciences (92-XX)

RLgraph

Software Authors:   Michael Schaarschmidt, Sven Mika, Kai Fricke, Eiko Yoneki
Cited in: 0 Publications
Related Software: OpenAI Gym; Horizon; Dopamine; RLlib; PyTorch; Sonnet; …
Main Fields:

scbounds

Software Authors:   Miratrix, L. W.; Wager, S.; Zubizarreta, J. R.
Cited in: 2 Publications (2018–2021)
Related Software: ELYP; scar; glmnet; LogConcDEAD; R
Main Fields: Statistics (62-XX)

YACOP

Software Authors:   Tech, M., Merkl, R.
Cited in: 2 Publications (2007–2017)
Related Software: PAML; PHYLIP; PCAP; ClustalW; SeqVis; iGTP; …
Main Fields: General and overarching topics; collections (00-XX); Biology and other natural sciences (92-XX)

akcbdt

Software Authors:   Nofuentes, José Antonio Roldán; Olvera Porcel, María Del Carmen
Cited in: 1 Publication (2015)
Related Software: bootstrap; R
Main Fields: Statistics (62-XX)

BERMP

Software Authors:   Y. Huang, N. N. He, Y. Chen, et al.
Cited in: 1 Publication (2019)
Related Software: RNAm5Cfinder; PseUI; AlexNet; DeepCRISPR; RAMPred; DeepMRMP; …
Main Fields: Computer science (68-XX); Biology and other natural sciences (92-XX)

cancerclass

Software Authors:   Budczies Jan; Daniel Kosztyla; Christian von Törne; Albrecht Stenzinger; Silvia Darb-Esfahani; Manfred Dietel; Carsten Denkert
Cited in: 0 Publications
Related Software: R; binom; cancerdata; Bioconductor
Main Fields:

ddbRNA

Software Authors:   di Bernardo D., Down T., Hubbard T.
Cited in: 1 Publication (2008)
Related Software: MARNA; PSoL; ProMiR II; Sfold; RNAKinetics; RSEARCH; …
Main Fields: Biology and other natural sciences (92-XX)

EpiLink

Software Authors:   Contiero P, Tittarelli A, Tagliabue G, Maghini A, Fabiano S, Crosignani P, Tessandori R.
Cited in: 0 Publications
Related Software: rpart; ipred; AS 207; e1071; ada; R; …
Main Fields:

ExtremeBounds

Software Authors:   Marek Hlavac
Cited in: 0 Publications
Related Software: R; Stata; SHAZAM; RATS; pcse; GAUSS
Main Fields:

fast

Software Authors:   Dominik Reusser
Cited in: 0 Publications
Related Software: ggplot2; deSolve; SAFE Toolbox; foreach; doParallel; sensitivity; …
Main Fields:

iMetrica

Software Authors:   Blakely, C
Cited in: 1 Publication (2017)
Related Software:
Main Fields: Statistics (62-XX)

KESS

Software Authors:   Renschler, Pascal
Cited in: 0 Publications
Related Software: ParaView; VTK; GEANT4; COMSOL; Kassiopeia
Main Fields:

MBC Toolbox

Software Authors:   mathworks
Cited in: 1 Publication (2017)
Related Software: Qhull; Matlab; CPLEX; polymake
Main Fields: Numerical analysis (65-XX); Systems theory; control (93-XX)

metilene

Software Authors:   Frank Jühling, Helene Kretzmer, Stephan H. Bernhart, Christian Otto, Peter F. Stadler, Steve Hoffmann
Cited in: 1 Publication (2019)
Related Software: HMM-Fisher; MethCP; HMM-DM; BSmooth; methylKit; GitHub
Main Fields: Biology and other natural sciences (92-XX)

PEAS

Software Authors:   N. Checchi, E. Giusti, S. Marsili-Libelli
Cited in: 0 Publications
Related Software: CAPTAIN; Meso CASiMiR; AQUATOX; QUAL2K; HEC-RAS; Ecopath II; …
Main Fields: Statistics (62-XX); Computer science (68-XX); Game theory, economics, finance, and other social and behavioral sciences (91-XX)

Phogly-PseAAC

Software Authors:   Xu, Yan; Ding, Ya-Xin; Ding, Jun; Wu, Ling-Yun; Deng, Nai-Yang
Cited in: 1 Publication (2015)
Related Software: GPS-SNO; GANNPhos; iEzy-drug; iSNO-PseAAC; DAVID
Main Fields: Biology and other natural sciences (92-XX)

sensitivity2x2xk

Software Authors:   Rosenbaum, Paul R.; Small, Dylan S.
Cited in: 1 Publication (2017)
Related Software: R
Main Fields: Statistics (62-XX)

SPINE-D

Software Authors:   Tuo Zhang , Eshel Faraggi , Bin Xue , A. Keith Dunker , Vladimir N. Uversky, Yaoqi Zhou
Cited in: 1 Publication (2016)
Related Software: FUNC; Aber-OWL; Ontobee; PlantTFDB; eggNOG; ELM; …
Main Fields: Statistics (62-XX); Biology and other natural sciences (92-XX)

TG-ROC

Software Authors:   Greiner M
Cited in: 0 Publications
Related Software: PresenceAbsence; Epi; DiagnosisMed; R; SDMTools; pROC; …
Main Fields:

Troparion

Software Authors:   M. Vashkevich, Yu. Rushkevich, A. Petrovsky
Cited in: 0 Publications
Related Software: SciPy; LibROSA; pysptk; SPTK; MIRtoolbox; LibriSpeech; …
Main Fields:

CompareTests

Software Authors:   Hormuzd A. Katki, David W. Edelstein
Cited in: 0 Publications
Related Software:
Main Fields:

ToxDBScan

Software Authors:   M. Römer; L. Backert; J. Eichner; A. Zell
Cited in: 0 Publications
Related Software:
Main Fields: