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Found 57 Software Packages (Results 1–57)

MENU-OKF

Software Authors:   Daskin, Mark S.
Referenced in: 252 Publications (1995–2022)
Related Software: MOD-DIST; SITATION; OR-Library; CPLEX; Tabu search; AMPL; …
Main Fields: Combinatorics (05-XX); Statistics (62-XX); Computer science (68-XX)

MOD-DIST

Software Authors:   Daskin, Mark S.
Referenced in: 252 Publications (1995–2022)
Related Software: MENU-OKF; SITATION; OR-Library; CPLEX; Tabu search; AMPL; …
Main Fields: Combinatorics (05-XX); Statistics (62-XX); Computer science (68-XX)

SITATION

Software Authors:   Daskin, Mark S.
Referenced in: 244 Publications (1995–2022)
Related Software: MENU-OKF; MOD-DIST; OR-Library; CPLEX; Tabu search; AMPL; …
Main Fields: Combinatorics (05-XX); Statistics (62-XX); Computer science (68-XX)

RCV1

Software Authors:   David D. Lewis; Yiming Yang; Tony G. Rose; Fan Li
Referenced in: 98 Publications (2005–2022)
Related Software: LIBSVM; UCI-ml; BoosTexter; L-BFGS; SGD-QN; LIBLINEAR; …
Main Fields: Calculus of variations and optimal control; optimization (49-XX); Statistics (62-XX); Numerical analysis (65-XX)

KONECT

Software Authors:   J. Kunegis
Referenced in: 71 Publications (2014–2022)
Related Software: SNAP; plfit; Pajek; Pajek datasets; NetworKit; node2vec; …
Main Fields: Combinatorics (05-XX); Probability theory and stochastic processes (60-XX); Computer science (68-XX)

infinite group relaxation

Software Authors:   Basu, Amitabh; Hildebrand, Robert; Köppe, Matthias
Referenced in: 24 Publications (2015–2022)
Related Software: GitHub; cutgeneratingfunctionology; SageMath; Normaliz; MIPLIB; PPL; …
Main Fields: Approximations and expansions (41-XX); Convex and discrete geometry (52-XX); Computer science (68-XX)

MEGAN

Software Authors:   Daniel H. Huson, Alexander F. Auch, Ji Qi, Stephan C. Schuster
Referenced in: 5 Publications (2010–2017)
Related Software: TETRA; TACOA; BLAST; ONE; RAST; PSI-BLAST; …
Main Fields: Combinatorics (05-XX); Statistics (62-XX); Computer science (68-XX)

ShapeNet

Software Authors:   Angel X. Chang, Thomas Funkhouser, Leonidas Guibas, Pat Hanrahan, Qixing Huang, Zimo Li, Silvio Savarese, Manolis Savva, Shuran Song, Hao Su, Jianxiong Xiao, Li Yi, Fisher Yu
Referenced in: 12 Publications (2018–2021)
Related Software: 3D-R2N2; PointNet; Adam; Pixel2Mesh; OpenDR; SoftRas; …
Main Fields: Numerical analysis (65-XX); Computer science (68-XX); Mechanics of deformable solids (74-XX)

QPLIB

Software Authors:   Furini, Fabio; Traversi, Emiliano; Belotti, Pietro; Frangioni, Antonio; Gleixner, Ambros; Gould, Nick; Liberti, Leo; Lodi, Andrea; Misener, Ruth; Mittelmann, Hans; Sahinidis, Nikolaos V.; Vigerske, Stefan; Wiegele, Angelika
Referenced in: 16 Publications (2018–2022)
Related Software: CPLEX; Gurobi; SCIP; QuadProgBB; BARON; Mosek; …
Main Fields: Calculus of variations and optimal control; optimization (49-XX); Numerical analysis (65-XX); Computer science (68-XX)

BRENDA

Software Authors:   Ida Schomburg, Antje Chang, Christian Ebeling, Marion Gremse, Christian Heldt, Gregor Huhn, Dietmar Schomburg
Referenced in: 6 Publications (2009–2021)
Related Software: KEGG; MetaCyc; AFGen; Graclus; PyTorch; DeepWalk; …
Main Fields: Combinatorics (05-XX); Statistics (62-XX); Computer science (68-XX)

Dopamine

Software Authors:   Pablo Samuel Castro, Subhodeep Moitra, Carles Gelada, Saurabh Kumar, Marc G. Bellemare
Referenced in: 2 Publications (2020–2021)
Related Software: OpenAI Gym; RLlib; PyTorch; ChainerRL; Python; Horizon; …
Main Fields: Computer science (68-XX); Game theory, economics, finance, and other social and behavioral sciences (91-XX)

GenBank

Software Authors:   Dennis A. Benson; Mark Cavanaugh; Karen Clark; Ilene Karsch-Mizrachi; David J. Lipman; James Ostell; Eric W. Sayers
Referenced in: 5 Publications (2015–2020)
Related Software: LAGAN; MEGA; Surge; Staticman; Nix; Jekyll; …
Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Numerical analysis (65-XX)

ProBase

Software Authors:   Wentao Wu, Hongsong Li, Haixun Wang, Kenny Q. Zhu
Referenced in: 7 Publications (2013–2022)
Related Software: YAGO; DBpedia; Freebase; WordNet; ConceptNet; ProbLog; …
Main Fields: Computer science (68-XX)

AI Explainability 360

Software Authors:   V. Arya, R. K. E. Bellamy, P.-Y. Chen, A. Dhurandhar, M. Hind, S. C. Hoffman, S. Houde, Q. V. Liao, R. Luss, A. Mojsilovic ́, S. Mourad, P. Pedemonte, R. Raghavendra, J. T. Richards, P. Sattigeri, K. Shanmugam, M. Singh, K. R. Varshney, D. Wei, Y. Zhang
Referenced in: 2 Publications (2020–2021)
Related Software: InterpretML; TensorFlow; Alibi Explain; Python; AIF360; H2O; …
Main Fields: Computer science (68-XX)

CVTree3

Software Authors:   Zuo, G.; Hao, B.
Referenced in: 4 Publications (2008–2017)
Related Software: PHYLIP; EMBOSS; Spark; SparkSW; FASTdoop; CloudPhylo; …
Main Fields: Statistics (62-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)

Rodinia

Software Authors:   Che, S., et al.
Referenced in: 4 Publications (2014–2021)
Related Software: CUDA; BOCK; Virtual library; Auto-WEKA; Spearmint; ParEGO; …
Main Fields: Mathematical logic and foundations (03-XX); Computer science (68-XX)

OrthoDB

Software Authors:   Kriventseva EV et al
Referenced in: 2 Publications (2013–2017)
Related Software: OrthoMCL; eggNOG; MSOAR; GASTS; Mauve; Hetero; …
Main Fields: General and overarching topics; collections (00-XX); Biology and other natural sciences (92-XX)

Forest FIRE

Software Authors:   Cleophas, Loek; Hemerik, Kees
Referenced in: 3 Publications (2009–2020)
Related Software: MONA; Tiburon
Main Fields: Computer science (68-XX)

MetaSim

Software Authors:   Richter, D.C.; Ott, F.; Auch, A.F.; Schmid, R.; Huson, D.H.
Referenced in: 2 Publications (2017–2018)
Related Software: ONE; BLAST; PSI-BLAST; MEGAN; Pfam; MetaCluster; …
Main Fields: Statistics (62-XX); Biology and other natural sciences (92-XX)

HCGene

Software Authors:   Valentini, G.; Cesa-Bianchi, N.
Referenced in: 2 Publications (2012–2016)
Related Software: Caltech-256; Vlfeat; GeneMANIA; Pfam; BioGRID; BLAST; …
Main Fields: Statistics (62-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)

MaxBin

Software Authors:   Wu, Y.W., Simmons, B.A., Singer, S.W.
Referenced in: 3 Publications (2022)
Related Software: MetaBAT; GTDB-Tk; CheckM; MetaWRAP; MEGAHIT; GitHub; …
Main Fields: Computer science (68-XX); Biology and other natural sciences (92-XX)

MENTA

Software Authors:   G. de Melo, G. Weikum
Referenced in: 2 Publications (2012–2016)
Related Software: DBpedia; BabelNet; YAGO; Wikipedia Miner; Freebase; Hadoop; …
Main Fields: Computer science (68-XX)

NAST

Software Authors:   T. Z. DeSantis, Jr., P. Hugenholtz, K. Keller, E. L. Brodie, N. Larsen, Y. M. Piceno, R. Phan, G. L. Andersen
Referenced in: 2 Publications (2013–2015)
Related Software: MrBayes; Gegenees; POY; MLTreeMap; SEPP; GapCoder; …
Main Fields: Computer science (68-XX); Biology and other natural sciences (92-XX)

WebSEEK

Software Authors:   J. Smith, S.F. Chang
Referenced in: 1 Publication (2004)
Related Software: VisualSEEk; PicToSeek; NeTra; APCluster; apcluster; QBIC; …
Main Fields: Computer science (68-XX)

CAITLIN

Software Authors:   P. Vickers; J. L. Alty
Referenced in: 2 Publications (2002)
Related Software: FAUST; Tango; ANIMAL; Pavane; JOTSA; MUSE; …
Main Fields: Computer science (68-XX)

Entrez

Software Authors:   Jim Ostell
Referenced in: 0 Publications
Related Software: rentrez; phylotaR; GenBank; supersmartR; R; restez
Main Fields:

GTDB-Tk

Software Authors:   Pierre-Alain Chaumeil, Aaron J Mussig, Philip Hugenholtz, Donovan H Parks
Referenced in: 2 Publications (2022)
Related Software: CheckM; MetaWRAP; MaxBin; MetaBAT; MEGAHIT; CLMB; …
Main Fields: Computer science (68-XX); Biology and other natural sciences (92-XX)

HmmUFOtu

Software Authors:   Zheng, Q., Bartow-McKenney, C., Meisel, J.S., Grice, E.A.
Referenced in: 2 Publications (2002–2022)
Related Software: DEPP; PhyloGeoTool; INSTRAL; UShER; MLTreeMap; SEPP; …
Main Fields: Computer science (68-XX); Biology and other natural sciences (92-XX)

Llun

Software Authors:   Glass, S.; Ince, D.; Fergus, E.
Referenced in: 1 Publication (2001)
Related Software: Tapestry; WebSphere; YACC
Main Fields: Computer science (68-XX)

LSCrawler

Software Authors:   M. Yuvarani, N.C.S.N. Iyengar, A. Kannan
Referenced in: 0 Publications
Related Software: Swoogle; SPARQL
Main Fields:

oblr

Software Authors:   Wickramarachchi, Anuradha; Lin, Yu
Referenced in: 2 Publications (2022)
Related Software: metaFlye; AMBER; Centrifuge; MaxBin; MetaBAT; Minimap2; …
Main Fields: Biology and other natural sciences (92-XX)

PGTdb

Software Authors:   Huang SL, Wu LC, Liang HK, Pan KT, Horng JT, Ko MT
Referenced in: 1 Publication (2007)
Related Software: KEGG; AAindex
Main Fields: Biology and other natural sciences (92-XX)

RadCon

Software Authors:   Joseph L. Thorley, Roderic D. M. Page
Referenced in: 2 Publications (2004–2005)
Related Software: PHYLIP; PAUP*; MrBayes; CloSpan; CloseGraph; TreeDT; …
Main Fields: Combinatorics (05-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)

StudioGAN

Software Authors:   Minguk Kang, Joonghyuk Shin, Jaesik Park
Referenced in: 0 Publications
Related Software: TensorFlow; PyTorch; StarGAN; ImageNet; Python; Swin Transformer; …
Main Fields:

BioSQL

Software Authors:   biosql.org
Referenced in: 0 Publications
Related Software: Omics Pipe; Anaconda; IPython; PyPI; BioRuby; BioJava; …
Main Fields:

CLICS

Software Authors:   Cory Kapser; Michael W. Godfrey
Referenced in: 1 Publication (2017)
Related Software:
Main Fields: Computer science (68-XX)

DecisionMaster

Software Authors:   Aleksandr Podvesovskii, Alena Zakharova, Dmitriy Korostelyov, Aleksandr Kuzin
Referenced in: 0 Publications
Related Software: MindDecider; SuperDecisions; Visual C#
Main Fields:

FeatureVis

Software Authors:   Felix Grün, Christian Rupprecht, Nassir Navab, Federico Tombari
Referenced in: 0 Publications
Related Software: AlexNet; BDD100k; Reluplex; ImageNet; Caffe; PMTK; …
Main Fields: Computer science (68-XX)

FraudDroid

Software Authors:   Feng Dong, Haoyu Wang, Li Li, Yao Guo, Tegawende F. Bissyande, Tianming Liu, Guoai Xu, Jacques Klein
Referenced in: 0 Publications
Related Software: LibRadar; IccTA; monkeyrunner; YOLO; Fiddler; Python; …
Main Fields:

GanHand

Software Authors:   Corona, E., Pumarola, A., Aleny`a, G., Moreno-Noguer, F., Rogez, G.
Referenced in: 0 Publications
Related Software: JGR-P2O; Hand PointNet; Silhouette-Net; MeshTransformer; SolarGest; V2V-PoseNet; …
Main Fields:

GOTax

Software Authors:   Schlicker, A.; Rahnenführer, J.; Albrecht, M.; Lengauer, T.; Domingues, F. S.
Referenced in: 0 Publications
Related Software:
Main Fields:

metacoder

Software Authors:   Zachary Foster, Niklaus Grunwald, Rob Gilmore
Referenced in: 0 Publications
Related Software: pkgdown; magrittr; ggtree; GUniFrac; ggplot2; microbiome; …
Main Fields:

MultiWiBi

Software Authors:   Flati, Tiziano; Vannella, Daniele; Pasini, Tommaso; Navigli, Roberto
Referenced in: 1 Publication (2016)
Related Software: DBpedia; Freebase; MENTA; BabelNet; Wikipedia Miner; Nasari; …
Main Fields: Computer science (68-XX)

NTSYSpc

Software Authors:   F. James Rohlf; Exeter Software
Referenced in: 1 Publication (1999)
Related Software: tpsSmall; tpsRegr; TpsRelw
Main Fields: Statistics (62-XX)

PATTY

Software Authors:   Ndapandula Nakashole, Gerhard Weikum, Fabian Suchanek
Referenced in: 1 Publication (2017)
Related Software: LEMP; GloVe
Main Fields: Computer science (68-XX)

rTANDEM

Software Authors:   F. Fournier, C. J. Beauparlant, R. Paradis, A. Droit
Referenced in: 0 Publications
Related Software: GO.db; reactome.db; Reactome; rols; hpar; Rcpp; …
Main Fields:

SortMeRNA

Software Authors:   Kopylova E, Noe L, Touzet H
Referenced in: 1 Publication (2015)
Related Software: EMIRGE; ViennaRNA; TagCleaner; OligoWalk; OptiRNAi; ASTALAVISTA; …
Main Fields: General and overarching topics; collections (00-XX); Biology and other natural sciences (92-XX)

TaxMan

Software Authors:   Jones M, Blaxter M
Referenced in: 0 Publications
Related Software: MrBayes; phyloXML; iTOL; Pfam; BMGE; Jalview; …
Main Fields:

TexMo

Software Authors:   Pfeiffer, Rolf-Helge; Wasowski, Andrzej
Referenced in: 0 Publications
Related Software:
Main Fields:

TREPPS

Software Authors:   Abbas, Assad; Zhang, Limin; Khan, Samee U.
Referenced in: 0 Publications
Related Software: FARS
Main Fields:

VoCSK

Software Authors:   Liu, Jingping; Chen, Tao; Wang, Chao; Liang, Jiaqing; Chen, Lihan; Xiao, Yanghua; Chen, Yunwen; Jin, Ke
Referenced in: 1 Publication (2022)
Related Software: word2vec; ALBERT; RoBERTa; XLNet; BERT; Transformers; …
Main Fields: Computer science (68-XX)

XBRL

Software Authors:   Roberto Bertolusso
Referenced in: 0 Publications
Related Software: quantmod; R; finreportr
Main Fields:

BiClusO

Software Authors:   Karim M.B., Huang M., Ono N., Kanaya S., Altaf-Ul-Amin M.
Referenced in: 0 Publications
Related Software:
Main Fields:

BIOMASS

Software Authors:   Maxime REJOU-MECHAIN, Ariane TANGUY, Camille PIPONIOT, Jerome CHAVE, Bruno HERAULT
Referenced in: 0 Publications
Related Software:
Main Fields:

evaluator

Software Authors:   David Severski
Referenced in: 0 Publications
Related Software:
Main Fields:

gclust

Software Authors:   Marine Bruneau, Thierry Mottet, Serge Moulin, Maël Kerbiriou, Franz Chouly, Stéphane Chretien, Christophe Guyeux
Referenced in: 0 Publications
Related Software:
Main Fields:

robustrao

Software Authors:   María del Carmen Calatrava Moreno, Thomas Auzinger
Referenced in: 0 Publications
Related Software:
Main Fields: