DistMesh Software Authors: P.-O. Persson; G. Strang Cited in: 317 Publications (2004–2023) Related Software: Matlab; Triangle; rbf_qr; Gmsh; iFEM; FreeFem++; … Main Fields: Partial differential equations (35-XX); Numerical analysis (65-XX); Mechanics of deformable solids (74-XX)
top.m Software Authors: Sigmund, O Cited in: 241 Publications (2005–2022) Related Software: top88.m; Matlab; ESOFRAME; PolyTop; topopt_multi; DistMesh; … Main Fields: Calculus of variations and optimal control; optimization (49-XX); Numerical analysis (65-XX); Mechanics of deformable solids (74-XX)
PolyMesher Software Authors: Talischi, Cameron; Paulino, Glaucio H.; Pereira Anderson; Menezes, Ivan F.M. Cited in: 178 Publications (2012–2023) Related Software: PolyTop; Matlab; Triangle; DistMesh; MRST; iFEM; … Main Fields: Partial differential equations (35-XX); Calculus of variations and optimal control; optimization (49-XX); Numerical analysis (65-XX)
SnapPy Software Authors: Marc Culler; Nathan Dunfield; Matthias Goerner;Morwen Thistlethwaite. Cited in: 154 Publications (2010–2023) Related Software: SnapPea; Regina; SageMath; GitHub; KnotInfo; Magma; … Main Fields: Group theory and generalizations (20-XX); Manifolds and cell complexes (57-XX); Global analysis, analysis on manifolds (58-XX)
ReALE Software Authors: Raphaël Loubère; Pierre-Henri Maire; Mikhail Shashkov; Jérôme Breil; Stéphane Galera Cited in: 130 Publications (2010–2023) Related Software: HE-E1GODF; MOOD; RIEMANN; CAVEAT; SHASTA; HLLE; … Main Fields: Partial differential equations (35-XX); Numerical analysis (65-XX); Mechanics of deformable solids (74-XX)
FeynArts Software Authors: Hagen Eck; Sepp Küblbeck Cited in: 117 Publications (2000–2022) Related Software: FormCalc; FeynCalc; FeynRules; LoopTools; Mathematica; CutTools; … Main Fields: Numerical analysis (65-XX); Computer science (68-XX); Quantum theory (81-XX)
top88.m Software Authors: Andreassen, Erik; Clausen, Anders; Schevenels, Mattias; Lazarov, Boyan S.; Sigmund, Ole Cited in: 89 Publications (2011–2022) Related Software: top.m; Matlab; ESOFRAME; PolyTop; topopt_multi; PETSc; … Main Fields: Calculus of variations and optimal control; optimization (49-XX); Numerical analysis (65-XX); Mechanics of deformable solids (74-XX)
SLMC Software Authors: Hugo Vieira; Luís Caires Cited in: 72 Publications (2003–2022) Related Software: PIPER; PRISM; KLAIM; Maude; Uppaal; BlenX; … Main Fields: General and overarching topics; collections (00-XX); Mathematical logic and foundations (03-XX); Computer science (68-XX)
Kenzo Software Authors: Rubio, Julio; Sergeraert, Francis; Yvon Siret; Xavier Dousson Cited in: 67 Publications (2000–2023) Related Software: EAT; ACL2; Coq; HAP; GAP; CHomP; … Main Fields: Commutative algebra (13-XX); Category theory; homological algebra (18-XX); Group theory and generalizations (20-XX)
DIRECT Software Authors: Finkel, D.E; He, Jian; Verstak, Alex; Watson, Layne T.; Sosonkina, Masha Cited in: 63 Publications (2006–2022) Related Software: LGO; MCS; EGO; SymDIRECT; MultiMin; PSwarm; … Main Fields: Partial differential equations (35-XX); Statistics (62-XX); Numerical analysis (65-XX)
SDPLIB Software Authors: Brian Borchers Cited in: 66 Publications (1999–2022) Related Software: SDPT3; SeDuMi; CSDP; SDPA; SDPLR; PENNON; … Main Fields: Linear and multilinear algebra; matrix theory (15-XX); Calculus of variations and optimal control; optimization (49-XX); Numerical analysis (65-XX)
BEAST Software Authors: Bouckaert, R., Heled, J., Kühnert, D., Vaughan, T., Wu, C-H., Xie, D., Suchard, MA., Rambaut, A., Drummond, A. J. Cited in: 59 Publications (2009–2022) Related Software: MrBayes; BEAUti; RAxML; fastDNAml; R; ASTRAL-II; … Main Fields: Combinatorics (05-XX); Probability theory and stochastic processes (60-XX); Statistics (62-XX)
RanGen Software Authors: Erik Demeulemeester, Mario Vanhoucke, Willy Herroelen Cited in: 59 Publications (2003–2022) Related Software: PSPLIB; DAGEN; Scatter Search; Gurobi; MPSPLib; ILOG SCHEDULE; … Main Fields: Calculus of variations and optimal control; optimization (49-XX); Computer science (68-XX); Operations research, mathematical programming (90-XX)
RIPPLE Software Authors: Kothe DB, Mjolness RC, Torrey MD Cited in: 57 Publications (1992–2021) Related Software: SOLA-VOF; SLIC; NASA-VOF2D; PROST; Flow-3D; Gerris; … Main Fields: Partial differential equations (35-XX); Numerical analysis (65-XX); Fluid mechanics (76-XX)
CHomP Software Authors: http://chomp.rutgers.edu/People.html Cited in: 53 Publications (2006–2023) Related Software: GAP; CAPD; Perseus; RedHom; Kenzo; Homology; … Main Fields: Dynamical systems and ergodic theory (37-XX); Algebraic topology (55-XX); Manifolds and cell complexes (57-XX)
Regina Software Authors: B.A. Burton, R. Budney, W. Pettersson, et al. Cited in: 49 Publications (2004–2022) Related Software: SnapPy; SnapPea; GitHub; SageMath; Normaliz; simpcomp; … Main Fields: Combinatorics (05-XX); Algebraic geometry (14-XX); Convex and discrete geometry (52-XX)
PolyTop Software Authors: Talischi, Cameron; Paulino, Glaucio H.; Pereira Anderson; Menezes, Ivan F.M. Cited in: 45 Publications (2012–2022) Related Software: PolyMesher; Matlab; top.m; top88.m; PETSc; PolyMat; … Main Fields: Calculus of variations and optimal control; optimization (49-XX); Numerical analysis (65-XX); Mechanics of deformable solids (74-XX)
Gudhi Software Authors: INRIA; Clement Maria; Jean-Daniel Boissonnat; Marc Glisse; Mariette Yvinec Cited in: 40 Publications (2014–2022) Related Software: PHAT; Dionysus; javaPlex; Ripser; TDA; Perseus; … Main Fields: Algebraic topology (55-XX); Statistics (62-XX); Numerical analysis (65-XX)
Pregel Software Authors: Malewicz, G., Austern, M.H., Bik, A.J., Dehnert, J.C., Horn, I., Leiser, N., Czajkowski, G. Cited in: 37 Publications (2010–2022) Related Software: GraphLab; MapReduce; Hadoop; Giraph; PowerGraph; GraphX; … Main Fields: Combinatorics (05-XX); Numerical analysis (65-XX); Computer science (68-XX)
UMAP Software Authors: Leland McInnes, John Healy, James Melville Cited in: 36 Publications (2020–2022) Related Software: t-SNE; Scikit; word2vec; GitHub; PyTorch; ImageNet; … Main Fields: Combinatorics (05-XX); Statistics (62-XX); Computer science (68-XX)
APOGEE Software Authors: Ruth Misener, Jeffrey P. Thompson, Christodoulos A. Floudas Cited in: 40 Publications (2012–2022) Related Software: BARON; GloMIQO; SCIP; CPLEX; MINLPLib; GAMS; … Main Fields: Combinatorics (05-XX); Linear and multilinear algebra; matrix theory (15-XX); Numerical analysis (65-XX)
ARACNE Software Authors: A. A. Margolin, I. Nemenman, K. Basso, C. Wiggins, G. Stolovitzky, R. D. Favera, A. Califano Cited in: 34 Publications (2009–2022) Related Software: minet; KEGG; glasso; SynTReN; GeneNetWeaver; R; … Main Fields: Statistics (62-XX); Computer science (68-XX); Operations research, mathematical programming (90-XX)
MPICH-G2 Software Authors: Karonis, Nicholas T.; Toonen, Brian; Foster, Ian Cited in: 17 Publications (2003–2010) Related Software: Globus Toolkit; MPI; MPI/MPICH; PVM; LAM-MPI; CrossGrid; … Main Fields: Computer science (68-XX); Fluid mechanics (76-XX); Quantum theory (81-XX)
BRITE Software Authors: Medina A, Lakhina A, Matta I, Byers J Cited in: 16 Publications (2003–2021) Related Software: Chord; Globus Toolkit; SCRIBE; Condor-G; LEDA; ICENI; … Main Fields: Combinatorics (05-XX); Computer science (68-XX); Operations research, mathematical programming (90-XX)
SIERRA Software Authors: Stewart, James R.; Edwards, H.Carter Cited in: 23 Publications (2003–2021) Related Software: PETSc; Zoltan; deal.ii; p4est; ParFUM; Trilinos; … Main Fields: Combinatorics (05-XX); Numerical analysis (65-XX); Computer science (68-XX)
CliqueTop Software Authors: Giusti C Cited in: 30 Publications (2015–2022) Related Software: Holes; Ripser; GitHub; javaPlex; PersistenceImages; Gudhi; … Main Fields: Combinatorics (05-XX); Algebraic topology (55-XX); Statistics (62-XX)
Snap Software Authors: Oliver Goodman Cited in: 30 Publications (1999–2019) Related Software: SnapPea; SnapPy; Magma; GAP; Orb; PARI/GP; … Main Fields: \(K\)-theory (19-XX); Group theory and generalizations (20-XX); Differential geometry (53-XX)
Adinkras Software Authors: Zhang, Yan X. Cited in: 27 Publications (2005–2021) Related Software: LieART; HEPTHools; Adinkra.m; Mathematica; adynkra; Susyno; … Main Fields: Combinatorics (05-XX); Linear and multilinear algebra; matrix theory (15-XX); Group theory and generalizations (20-XX)
FELSOS Software Authors: Smolianski A Cited in: 25 Publications (2005–2021) Related Software: PROST; SLIC; Cimlib; FEATFLOW; Gmsh; Gerris; … Main Fields: Partial differential equations (35-XX); Numerical analysis (65-XX); Mechanics of deformable solids (74-XX)
AFGen Software Authors: Nikil Wale and George Karypis. Cited in: 21 Publications (2009–2022) Related Software: gSpan; PyTorch; node2vec; DeepWalk; Graclus; BRENDA; … Main Fields: Combinatorics (05-XX); Statistics (62-XX); Numerical analysis (65-XX)
insulate Software Authors: Seidel, Raimund; Wolpert, Nicola Cited in: 24 Publications (2005–2021) Related Software: ISOLATE; Maple; Lgp; CGAL; Axel; 2D Arrangement; … Main Fields: Commutative algebra (13-XX); Algebraic geometry (14-XX); Numerical analysis (65-XX)
GeoFEM Software Authors: Fujishiro, Issei; Chen, Li; Takeshima, Yuriko; Nakamura, Hiroko; Suzuki, Yasuko Cited in: 22 Publications (2001–2022) Related Software: PETSc; Eigtool; OpenDX; ADVENTURE Autogl; VTK; METIS; … Main Fields: Numerical analysis (65-XX); Computer science (68-XX); Fluid mechanics (76-XX)
topopt_multi Software Authors: Tavakoli, Rouhollah Cited in: 23 Publications (2014–2022) Related Software: top.m; Matlab; top88.m; PetIGA; PETSc; PolyTop; … Main Fields: Calculus of variations and optimal control; optimization (49-XX); Numerical analysis (65-XX); Computer science (68-XX)
Axel Software Authors: Julien Wintz; Bernard Mourrain; Anaïs Ducoffe; Meriadeg Perrinel; Angelos Mantzaflaris Cited in: 22 Publications (2005–2020) Related Software: insulate; SINGULAR; SYNAPS; Lgp; Mathematica; Maple; … Main Fields: Combinatorics (05-XX); Algebraic geometry (14-XX); Manifolds and cell complexes (57-XX)
Parsol Software Authors: Jakusšev, Alexander; Čiegis, Raimondas; Laukaitytė, Inga; Trofimov, Vyacheslav Cited in: 19 Publications (2005–2017) Related Software: PETSc; BALaser; Diffpack; ParaView; MITK; FREEFLOW; … Main Fields: Partial differential equations (35-XX); Numerical analysis (65-XX); Fluid mechanics (76-XX)
QuantumMACMAHON Software Authors: D. Zeilberger Cited in: 21 Publications (2005–2022) Related Software: Knot Atlas; qZeil; qMultiSum Main Fields: Combinatorics (05-XX); Associative rings and algebras (16-XX); Nonassociative rings and algebras (17-XX)
VFC package Software Authors: Pardon, John Cited in: 21 Publications (2015–2022) Related Software: – Main Fields: Algebraic geometry (14-XX); Dynamical systems and ergodic theory (37-XX); Differential geometry (53-XX)
GrAL Software Authors: Berti, G. Cited in: 19 Publications (2000–2013) Related Software: FEniCS; Trilinos; Boost; CGAL; DOLFIN; PETSc; … Main Fields: Numerical analysis (65-XX); Computer science (68-XX); Mechanics of deformable solids (74-XX)
Persistence Landscape Software Authors: Bubenik, Peter; Dłotko, Paweł Cited in: 18 Publications (2017–2022) Related Software: TDA; Ripser; GitHub; PersistenceImages; Gudhi; PHAT; … Main Fields: Algebraic topology (55-XX); Statistics (62-XX); Numerical analysis (65-XX)
rgeos Software Authors: Roger Bivand, Colin Rundel, Edzer Pebesma, Rainer Stuetz, Karl Ove Hufthammer Cited in: 7 Publications (2017–2021) Related Software: R; rgdal; raster; ggplot2; leaflet; sf; … Main Fields: Probability theory and stochastic processes (60-XX); Statistics (62-XX); Numerical analysis (65-XX)
Pcp2Nurb Software Authors: Peters, Jörg Cited in: 14 Publications (1998–2018) Related Software: CHARMS; Trilinos; XFEM; PolyTop; Matlab Main Fields: General and overarching topics; collections (00-XX); Numerical analysis (65-XX); Computer science (68-XX)
EAT Software Authors: Francis Sergeraert; Julio Rubio Cited in: 17 Publications (2001–2015) Related Software: Kenzo; ACL2; Coq; Isabelle/HOL; LISP; Mizar; … Main Fields: Mathematical logic and foundations (03-XX); Category theory; homological algebra (18-XX); Algebraic topology (55-XX)
MMD GAN Software Authors: Chun-Liang Li, Wei-Cheng Chang, Yu Cheng, Yiming Yang, Barnabás Póczos Cited in: 12 Publications (2019–2022) Related Software: Wasserstein GAN; Adam; TensorFlow; StyleGAN; ImageNet; CIFAR; … Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Computer science (68-XX)
MPICH2 Software Authors: Gropp, William Cited in: 7 Publications (2002–2016) Related Software: OpenMPI; Matlab; NAS Parallel Benchmarks; MPI; ParMETIS; Mathematica; … Main Fields: Numerical analysis (65-XX); Computer science (68-XX); Mechanics of particles and systems (70-XX)
PSIPRED Software Authors: Mcguffin, L. J.; Bryson, K.; Jones, D. T. Cited in: 8 Publications (2004–2021) Related Software: MODELLER; BLAST; PSI-BLAST; PROCHECK; MUSCLE; MUFold-SSW; … Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Computer science (68-XX)
DMPlex Software Authors: Lange, Michael; Mitchell, Lawrence; Knepley, Matthew G.; Gorman, Gerard J. Cited in: 14 Publications (2016–2022) Related Software: PETSc; Firedrake; DOLFIN; FEniCS; PyOP2; hypre; … Main Fields: Partial differential equations (35-XX); Numerical analysis (65-XX); Fluid mechanics (76-XX)
El-Topo Software Authors: Tyson Brochu; Robert Bridson Cited in: 14 Publications (2009–2022) Related Software: ALBERTA; FronTier; DUNE; UMFPACK; DistMesh; OPCODE; … Main Fields: Partial differential equations (35-XX); Numerical analysis (65-XX); Computer science (68-XX)
ExPASy Software Authors: Gasteiger, E.; Gattiker, A.; Hoogland, C.; Ivanyi, I.; Appel, R. D.; Bairoch, A Cited in: 10 Publications (2006–2020) Related Software: MODELLER; BLAST; PSI-BLAST; R; UniProt; PROCHECK; … Main Fields: Statistics (62-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)
Hemelb Software Authors: Mazzeo, M.D.; Coveney, P.V. Cited in: 13 Publications (2008–2021) Related Software: MUPHY; Palabos; OpenLB; LUDWIG; Hemocell; CUDA; … Main Fields: Partial differential equations (35-XX); Numerical analysis (65-XX); Fluid mechanics (76-XX)
Phobius Software Authors: Lukas Käll, Anders Krogh, Erik L. L. Sonnhammer Cited in: 7 Publications (2009–2018) Related Software: Signal-CF; UniProt; Signal-3L; BLAST; PSI-BLAST; Cd-hit; … Main Fields: General topology (54-XX); Probability theory and stochastic processes (60-XX); Statistics (62-XX)
PyOP2 Software Authors: Imperial College London; Rathgeber F, Markall GR, Mitchell L, Loriant N, Ham DA, Bertolli C, Kelly PH Cited in: 10 Publications (2016–2020) Related Software: Firedrake; PETSc; FEniCS; petsc4py; COFFEE; TSFC; … Main Fields: Partial differential equations (35-XX); Global analysis, analysis on manifolds (58-XX); Numerical analysis (65-XX)
PUMI Software Authors: D. A. Ibanez, E. S. Seol, C. W. Smith, M. S. Shephard Cited in: 12 Publications (2016–2022) Related Software: Gmsh; PETSc; Zoltan; libMesh; VTK; VisIt; … Main Fields: Combinatorics (05-XX); Numerical analysis (65-XX); Computer science (68-XX)
Firmato Software Authors: Bartal, Y., Mayer, A., Nissim, K., Wool, A. Cited in: 6 Publications (2001–2018) Related Software: FIREMAN; Skybox; Snort; Graphviz; GitHub; Autoref; … Main Fields: Computer science (68-XX); Information and communication theory, circuits (94-XX)
Globular Software Authors: Krzysztof Bar, Aleks Kissinger, Jamie Vicary Cited in: 11 Publications (2016–2022) Related Software: Quantomatic; GitHub; opetopy; HoTT; TeNPy; DisCoPy; … Main Fields: Associative rings and algebras (16-XX); Category theory; homological algebra (18-XX); Algebraic topology (55-XX)
GPUTop Software Authors: Schmidt, Stephan; Schulz, Volker Cited in: 12 Publications (2011–2022) Related Software: top.m; top88.m; PETSc; ParaView; Gmsh; COMSOL; … Main Fields: Partial differential equations (35-XX); Numerical analysis (65-XX); Mechanics of deformable solids (74-XX)
jHoles Software Authors: Binchi, Jacopo; Merelli, Emanuela; Rucco, Matteo; Petri, Giovanni; Vaccarino, Francesco Cited in: 12 Publications (2014–2022) Related Software: javaPlex; GitHub; PHAT; Perseus; Gudhi; Holes; … Main Fields: Combinatorics (05-XX); Algebraic topology (55-XX); Statistics (62-XX)
ANODEs Software Authors: Emilien Dupont, Arnaud Doucet, Yee Whye Teh Cited in: 10 Publications (2020–2022) Related Software: torchdiffeq; FFJORD; PyTorch; Glow; DifferentialEquations.jl; DiffEqFlux; … Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Computer science (68-XX)
LearningAlgebraicVarieties Software Authors: Breiding, Paul; Kalisnik, Sara; Sturmfels, Bernd; Weinstein, Madeleine Cited in: 11 Publications (2018–2022) Related Software: Macaulay2; Bertini; PersistenceImages; IntDim; javaPlex; GitHub; … Main Fields: Commutative algebra (13-XX); Algebraic geometry (14-XX); Algebraic topology (55-XX)
QNet Software Authors: S.Grunewald, K.Forslund, A.Dress, V. Moulton Cited in: 11 Publications (2008–2020) Related Software: SplitsTree; iTOL; EMBOSS; Noisy; T-coffee; DIALIGN; … Main Fields: Combinatorics (05-XX); Convex and discrete geometry (52-XX); Statistics (62-XX)
MUSCADET Software Authors: Pastre, Dominique Cited in: 9 Publications (1989–2021) Related Software: OTTER; Automath; Isabelle/ZF; MACSYMA; REDUCE; Nuprl; … Main Fields: General and overarching topics; collections (00-XX); Mathematical logic and foundations (03-XX); Computer science (68-XX)
DTK Software Authors: Slattery SR, Wilson PPH, Pawlowski RP. Cited in: 8 Publications (2016–2022) Related Software: preCICE; MpCCI; Trilinos; MCT; tangram; Wonton; … Main Fields: Numerical analysis (65-XX); Computer science (68-XX); Mechanics of deformable solids (74-XX)
hwloc Software Authors: F. Broquedis, J. Clet-Ortega, S. Moreaud, N. Furmento, B. Goglin, G. Mercier, S. Thibault, R. Namyst Cited in: 6 Publications (2010–2020) Related Software: StarPU; PLASMA; SparseMatrix; Scotch; ISTL; Cilk; … Main Fields: Numerical analysis (65-XX); Computer science (68-XX); Fluid mechanics (76-XX)
knotkit Software Authors: C. Seed Cited in: 9 Publications (2014–2021) Related Software: GitHub; SnapPy; Knot Atlas; khoca; MathOverflow; SageMath; … Main Fields: Algebraic geometry (14-XX); Algebraic topology (55-XX); Manifolds and cell complexes (57-XX)
MGS Software Authors: Giavitto, J.-L.; Michel, O. Cited in: 9 Publications (2001–2016) Related Software: HOCL; NESL; Maude; HexaChord; PORGY; BioSPI; … Main Fields: General and overarching topics; collections (00-XX); Combinatorics (05-XX); Computer science (68-XX)
Nutils Software Authors: Evalf Computing; G. van Zwieten, C. Verhoosel, J. van Zwieten, T. van Opstal, W. Hoitinga Cited in: 9 Publications (2018–2022) Related Software: FEniCS; Ipopt; phase_field_composites; ParaView; pfm-cracks; HPX; … Main Fields: Partial differential equations (35-XX); Calculus of variations and optimal control; optimization (49-XX); Numerical analysis (65-XX)
OMT-G Software Authors: Borges, Karla A.V.; Davis, Clodoveu A.jun.; Leander, Alberto H.F. Cited in: 4 Publications (2001–2010) Related Software: Racer; FaCT++; DB2; Oracle; DISTIL Main Fields: Computer science (68-XX)
VON Software Authors: Hu SY, Chen JF, Chen TH Cited in: 4 Publications (2008–2014) Related Software: 3D triangulations; Triangle; CGAL; Chord; SCRIBE Main Fields: Computer science (68-XX); Operations research, mathematical programming (90-XX)
3D Surface Mesh Generation Software Authors: Laurent Rineau; Mariette Yvinec Cited in: 8 Publications (2011–2020) Related Software: CGAL; AFEM@matlab; Triangle; levmar; iFEM; Matlab; … Main Fields: Partial differential equations (35-XX); Numerical analysis (65-XX); Mechanics of deformable solids (74-XX)
GT-ITM Software Authors: Zegura, E.W Cited in: 3 Publications (2007–2012) Related Software: Stanford Tagger; Amazon EC2 Main Fields: Computer science (68-XX); Operations research, mathematical programming (90-XX)
KEGGgraph Software Authors: Jitao David Zhang; Stefan Wiemann Cited in: 7 Publications (2011–2015) Related Software: Bioconductor; KEGG; Reactome; igraph; clipper; graphite; … Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Biology and other natural sciences (92-XX)
NETWORKINFERENCE Software Authors: Smith, V.Anne; Jarvis, Erich D.; Hartemink, Alexander J. Cited in: 8 Publications (2002–2020) Related Software: Brain Connectivity Toolbox; KEGG; Church; Figaro; PRISM; pcalg; … Main Fields: Ordinary differential equations (34-XX); Probability theory and stochastic processes (60-XX); Statistics (62-XX)
SGN Sim Software Authors: Ribeiro AS, Lloyd-Price J Cited in: 7 Publications (2009–2019) Related Software: RegulonDB; FATODE; NOMAD; GeneNetWeaver; Path2Models; SOSlib; … Main Fields: Computer science (68-XX); Biology and other natural sciences (92-XX)
TituRel Software Authors: Gunther Schmidt Cited in: 8 Publications (2007–2015) Related Software: RelView; Haskell; Algorithm 97; Z; Ralf; Rath; … Main Fields: History and biography (01-XX); Mathematical logic and foundations (03-XX); Combinatorics (05-XX)
TopoLayout Software Authors: Archambault, D.; Munzner, T.; Auber, D. Cited in: 6 Publications (2008–2021) Related Software: GVF; WebGraph; visone; Prefuse; GENeVis Main Fields: Combinatorics (05-XX); Statistics (62-XX); Computer science (68-XX)
TopologyNet Software Authors: Zixuan Cang, Guo-Wei Wei Cited in: 8 Publications (2020–2022) Related Software: Ripser; TDA; PersistenceImages; javaPlex; Dionysus; PHAT; … Main Fields: Combinatorics (05-XX); Differential geometry (53-XX); Algebraic topology (55-XX)
3dprintmath Software Authors: Segerman, Henry Cited in: 6 Publications (2016–2021) Related Software: JavaView; GeoGebra Main Fields: General and overarching topics; collections (00-XX); Group theory and generalizations (20-XX); Measure and integration (28-XX)
HMMTOP Software Authors: Tusnady, G. E.; Simon, I. Cited in: 4 Publications (2004–2006) Related Software: SOSUI; BLAST; PSI-BLAST; Phobius; PISCES; DomCut; … Main Fields: Biology and other natural sciences (92-XX)
libigl Software Authors: Alec Jacobson, Daniele Panozzo, et.al. Cited in: 6 Publications (2015–2020) Related Software: CGAL; GitHub; AdTree; PMP; SUM; AdQSM; … Main Fields: Numerical analysis (65-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)
MeshCNN Software Authors: Rana Hanocka, Amir Hertz, Noa Fish, Raja Giryes, Shachar Fleishman, Daniel Cohen-Or Cited in: 6 Publications (2020–2022) Related Software: PointNet; TensorFlow; PyTorch; U-Net; Adam; Keras; … Main Fields: Algebraic topology (55-XX); Numerical analysis (65-XX); Computer science (68-XX)
PolyMat Software Authors: Sanders, E. D.; Pereira, A.; Aguiló, M. A.; Paulino, G. H. Cited in: 7 Publications (2020–2022) Related Software: PolyTop; Stress_3D_Sensitivity; Matlab; GRAND; FEniCS; PETSc; … Main Fields: Calculus of variations and optimal control; optimization (49-XX); Numerical analysis (65-XX); Mechanics of deformable solids (74-XX)
Rate4Site Software Authors: Pupko T, Bell RE, Mayrose I, Glaser F, Ben-Tal N Cited in: 1 Publication (2011) Related Software: BLAST; PSI-BLAST; Naccess; ConSeq; R; PROSITE; … Main Fields: Biology and other natural sciences (92-XX); Information and communication theory, circuits (94-XX)
TreeFix Software Authors: Wu, Y., Rasmussen, M., Bansal, M., Kellis, M. Cited in: 7 Publications (2013–2021) Related Software: ecceTERA; Notung; RAxML; PHYLIP; OCTAL; FastMe; … Main Fields: General and overarching topics; collections (00-XX); Combinatorics (05-XX); Statistics (62-XX)
CGM Software Authors: Tautges, T.J. Cited in: 6 Publications (2001–2019) Related Software: CUBIT; Geode; Open CASCADE; petsc4py; Python; SWIG; … Main Fields: Partial differential equations (35-XX); Numerical analysis (65-XX); Computer science (68-XX)
Cobalt Software Authors: Matthew J. Grismer; William Z. Strang; Robert F. Tomaro; Frank C. Witzeman Cited in: 6 Publications (2002–2008) Related Software: PETSc Main Fields: Numerical analysis (65-XX); Fluid mechanics (76-XX)
fKenzo Software Authors: Heras, J.; Pascual, V.; Rubio, J.; Sergeraert, F. Cited in: 6 Publications (2011–2018) Related Software: Kenzo; HAP; GAP; OpenMath; SCSCP; ACL2; … Main Fields: Algebraic topology (55-XX); Computer science (68-XX)
FoamGrid Software Authors: O. Sander, T. Koch, N. Schröder, B. Flemisch Cited in: 6 Publications (2019–2022) Related Software: DuMuX; ISTL; DUNE; UMFPACK; Gmsh; FraC; … Main Fields: Numerical analysis (65-XX); Fluid mechanics (76-XX)
GATE Software Authors: Dominique, Stéphane Author Profile; Trépanier, Jean-Yves; Tribes, Christophe Cited in: 6 Publications (1999–2016) Related Software: Genocop; NOMAD; OrthoMADS; Matlab; itsmr; Kron; … Main Fields: Computer science (68-XX); Fluid mechanics (76-XX); Quantum theory (81-XX)
HyTeG Software Authors: Kohl, N.; Thönnes, D.; Drzisga, D.; Bartuschat, D.; Rüde, U. Cited in: 6 Publications (2019–2022) Related Software: p4est; likwid; MODESTO; ExaSlang; SDSLc; Petalisp; … Main Fields: Numerical analysis (65-XX); Computer science (68-XX); Mechanics of deformable solids (74-XX)
JTS Topology Suite Software Authors: Vivid Solutions, Inc. (VSI) Cited in: 2 Publications (2013–2015) Related Software: GRASS GIS; Spatial SQL; Informix; DB2; Oracle; Matlab; … Main Fields: Geometry (51-XX); Statistics (62-XX)
PCANet Software Authors: Tsung-Han Chan, Kui Jia, Shenghua Gao, Jiwen Lu, Zinan Zeng, Yi Ma Cited in: 6 Publications (2015–2020) Related Software: SIFT; LIBSVM; ImageNet; Matlab; JAFFE; Outex; … Main Fields: Statistics (62-XX); Computer science (68-XX); Statistical mechanics, structure of matter (82-XX)
PolyTop++ Software Authors: Duarte LS, Celes W, Pereira A, Menezes IFM, Paulino GH Cited in: 6 Publications (2016–2022) Related Software: PolyTop; CUDA; GPUTop; ParaView; PETSc; Gmsh; … Main Fields: Numerical analysis (65-XX); Mechanics of deformable solids (74-XX); Systems theory; control (93-XX)
ReebHanTun Software Authors: Dey, Tamal K.; Fan, Fengtao; Wang, Yusu Cited in: 6 Publications (2013–2021) Related Software: Blossom-Quad; QuadCover; libQEx; QEx; CPLEX; tabipb; … Main Fields: Differential geometry (53-XX); Manifolds and cell complexes (57-XX); Numerical analysis (65-XX)
RIVET Software Authors: Michael Lesnick, Matthew Wright Cited in: 4 Publications (2020–2022) Related Software: PHAT; Ripser; Eirene; Magma; Macaulay2; CoCoA; … Main Fields: Commutative algebra (13-XX); Algebraic topology (55-XX); Statistics (62-XX)
Topology ToolKit Software Authors: Tierny J, Favelier G, Levine J, Gueunet C, Michaux M Cited in: 6 Publications (2019–2021) Related Software: Dionysus; Gudhi; Scikit; Code_Saturne; ParaView; MScomplex; … Main Fields: Algebraic topology (55-XX); Statistics (62-XX); Computer science (68-XX)
TransforMesh Software Authors: Zaharescu, A., Boyer, E., Horaud, R Cited in: 5 Publications (2009–2015) Related Software: PRMLT; ParaView; FEtk; TMSmesh; PHG; TetGen Main Fields: Partial differential equations (35-XX); Statistics (62-XX); Numerical analysis (65-XX)
ASTRX/OBLX Software Authors: Ochotta, E.S. , Rutenbar, R.A., Carley, L.R Cited in: 4 Publications (2007–2014) Related Software: CGLS Main Fields: Computer science (68-XX); Optics, electromagnetic theory (78-XX); Operations research, mathematical programming (90-XX)
ATISBAT Software Authors: Aguilera-Venegas, Gabriel; Galán-García, José L.; Mérida-Casermeiro, Enrique; Rodríguez-Cielos, Pedro Cited in: 5 Publications (2014–2019) Related Software: VRP Main Fields: Functions of a complex variable (30-XX); Dynamical systems and ergodic theory (37-XX); Numerical analysis (65-XX)
Chromium Software Authors: Humphreys, G., Houston, M., Ng, R., Frank, R., Ahern, S., Kirchner, P.D., Klosowski, J.T. Cited in: 3 Publications (2008–2015) Related Software: CAVE; CMPGRD; SimWall; HEDP; ParaView; gem5; … Main Fields: Computer science (68-XX); Fluid mechanics (76-XX)
DPillar Software Authors: Yong Liaoa; Jiangtao Yina; Dong Yinb; Lixin Gaoa Cited in: 4 Publications (2015–2022) Related Software: – Main Fields: General and overarching topics; collections (00-XX); Combinatorics (05-XX); Computer science (68-XX)
DTHB3D_Reg Software Authors: Pawar, Aishwarya; Zhang, Yongjie Jessica; Anitescu, Cosmin; Jia, Yue; Rabczuk, Timon Cited in: 4 Publications (2018–2021) Related Software: GitHub; BigNeuron; Matlab; BrainWeb; Mimics; TetGen Main Fields: Numerical analysis (65-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)