×

Found 65 Software Packages (Results 1–65)

APBS

Cited in 95 Documents (2001–2023)
Software Authors: Nathan Baker; J. Andrew McCammon; Michael Holst
Related Software: MIBPB; tabipb; CHARMM; …
Main Fields: Partial differential equations (35-XX); Numerical analysis (65-XX); Optics, electromagnetic theory (78-XX); …

edgeR

Cited in 65 Documents (2011–2023)
Software Authors: Mark D. Robinson; Davis J. McCarthy; Gordon K. Smyth
Related Software: Bioconductor; DEseq; R; …
Main Fields: General and overarching topics; collections (00-XX); Statistics (62-XX); Numerical analysis (65-XX); …

COSA

Cited in 52 Documents (2003–2023)
Software Authors: Friedman, Jerome H.; Meulman, Jacqueline J.
Related Software: UCI-ml; R; sparcl; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Computer science (68-XX); …

BioJava

Cited in 5 Documents (2009–2017)
Software Authors: Andreas Prlic; Andrew Yates; Spencer E. Bliven; Peter W. Rose; Julius Jacobsen; Peter V. Troshin; Mark Chapman; Jianjiong Gao; Chuan Hock Koh; Sylvain Foisy; Richard Holland; Gediminas Rimsa; Michael L. Heuer; H. Brandstatter-Muller; Philip E. Bourne; Scooter Willis
Related Software: Biopython; bioperl; MMTK; …
Main Fields: General and overarching topics; collections (00-XX); Computer science (68-XX); Operations research, mathematical programming (90-XX); …

PREvaIL

Cited in 10 Documents (2018–2019)
Software Authors: Song, Jiangning; Li, Fuyi; Takemoto, Kazuhiro; Haffari, Gholamreza; Akutsu, Tatsuya; Chou, Kuo-Chen; Webb, Geoffrey I.
Related Software: iDNA6mA-PseKNC; iRNA-PseColl; pLoc-mAnimal; …
Main Fields: Statistics (62-XX); Computer science (68-XX); Biology and other natural sciences (92-XX)

PSICO

Cited in 9 Documents (2002–2017)
Software Authors: Krippahl, Ludwig; Barahona, Pedro
Related Software: COCONUT; GLOPTLAB; BARON; …
Main Fields: Numerical analysis (65-XX); Computer science (68-XX); Operations research, mathematical programming (90-XX); …

KEGGgraph

Cited in 8 Documents (2011–2023)
Software Authors: Jitao David Zhang; Stefan Wiemann
Related Software: Bioconductor; KEGG; Reactome; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Biology and other natural sciences (92-XX)

ProActive

Cited in 6 Documents (2002–2019)
Software Authors: Inria Sophia Antipolis
Related Software: AmbientTalk; ABS; Creol; …
Main Fields: Numerical analysis (65-XX); Computer science (68-XX); Geophysics (86-XX)

ParFE

Cited in 8 Documents (2008–2015)
Software Authors: M. Sala, U. Mennel, P. Arbenz, H. van Lenthe, R. Müller
Related Software: LAM-MPI; IFPACK; HDF5; …
Main Fields: Combinatorics (05-XX); Computer science (68-XX); Mechanics of deformable solids (74-XX); …

Engauge Digitizer

Cited in 6 Documents (2012–2022)
Software Authors: Mark Mitchell
Related Software: SPHERA; GitHub; ImageMagick; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX); Fluid mechanics (76-XX); …

CDAOstore

Cited in 4 Documents (2011–2022)
Software Authors: Chisham, Brandon; Pontelli, Enrico; Son, Tran Cao; Wright, Ben
Related Software: aspeed; LPaaS; GHC; …
Main Fields: General and overarching topics; collections (00-XX); Computer science (68-XX)

IntelliGEN

Cited in 4 Documents (2003–2012)
Software Authors: Kochut, Krys; Arnold, Jonathan; Sheth, Amit; Miller, John; Kraemer, Eileen; Arpinar, Budak; Cardoso, Jorge
Related Software: Woflan; Virtual Cell; JigCell; …
Main Fields: Computer science (68-XX); Operations research, mathematical programming (90-XX); Biology and other natural sciences (92-XX)

MCQ4Structures

Cited in 4 Documents (2014–2015)
Software Authors: Zok, Tomasz; Popenda, Mariusz; Szachniuk, Marta
Related Software: Jmol; MAMMOTH; FRASS; …
Main Fields: Combinatorics (05-XX); Statistics (62-XX); Operations research, mathematical programming (90-XX); …

SNPassoc

Cited in 1 Document (2016)
Software Authors: Juan R González, Lluís Armengol, Elisabet Guinó, Xavier Solé, Víctor Moreno
Related Software: SNPStats; R; haplo.stats; …
Main Fields: Statistics (62-XX); Biology and other natural sciences (92-XX)

clustermq

Cited in 0 Documents
Software Authors: Michael Schubert; EMBL
Related Software: R; drake; batchtools; …
Main Fields:

Simpleaffy

Cited in 1 Document (2011)
Software Authors: Claire L. Wilson; Crispin J. Miller
Related Software: Bioconductor; gcrma; affy; …
Main Fields: Statistics (62-XX)

BClass

Cited in 1 Document (2021)
Software Authors: Arturo Medrano-Soto; J. Andres Christen; Julio Collado-vides
Related Software: AutoClass; LISP-STAT; PyMix
Main Fields: Statistics (62-XX)

fabisearch

Cited in 0 Documents
Software Authors: Martin Ondrus, Ivor Cribben
Related Software: R; onlineCOV; changepoint.geo; …
Main Fields:

J3DV

Cited in 2 Documents (2002–2009)
Software Authors: Fang, Xiang; Miller, John A.; Arnold, Jonathan
Related Software: Virtual Cell; JigCell; YSMP; …
Main Fields: Computer science (68-XX); Biology and other natural sciences (92-XX)

Jstacs

Cited in 1 Document (2019)
Software Authors: Grau, Jan; Keilwagen, Jens; Gohr, André; Haldemann, Berit; Posch, Stefan; Grosse, Ivo
Related Software: UniProt; JASPAR; UCI-ml; …
Main Fields: Computer science (68-XX); Operations research, mathematical programming (90-XX)

KanGAL

Cited in 2 Documents (2004–2008)
Software Authors: Indian Institute of Technology Kanpur - Genetic Algorithms Laboratory; Kalyanmoy Deb
Related Software: MINLP; FEFLOW; DACE; …
Main Fields: Fluid mechanics (76-XX); Geophysics (86-XX); Operations research, mathematical programming (90-XX)

Oat

Cited in 0 Documents
Software Authors: Jason Brownlee
Related Software: optalgtoolkit; EvA2; JCLEC; …
Main Fields:

orca

Cited in 1 Document (2021)
Software Authors: Tomaž Hočevar; Janez Demšar
Related Software: R; GraphCrunch; RAGE; …
Main Fields: Combinatorics (05-XX); Computer science (68-XX); Game theory, economics, finance, and other social and behavioral sciences (91-XX)

ParTriCluster

Cited in 2 Documents (2008–2014)
Software Authors: Braga Araújo, Renata; Trielli Ferreira, Guilherme Henrique; Orair, Gustavo Henrique; Meira, Wagner; Celso Ferreira, Renato Antônio; Olavo Guedes Neto, Dorgival; Zaki, Mohammed Javeed
Related Software: DataCutter
Main Fields: Statistics (62-XX); Computer science (68-XX)

Real

Cited in 2 Documents (2016–2019)
Software Authors: Angelopoulos, Nicos; Abdallah, Samer; Giamas, Georgios
Related Software: STRING; proSQLite; SWI-Prolog; …
Main Fields: Statistics (62-XX); Computer science (68-XX)

snp.plotter

Cited in 0 Documents
Software Authors: Augustin Luna, Kristin K. Nicodemus
Related Software: LDheatmap; Rpap; genetics; …
Main Fields:

VATRAM

Cited in 1 Document (2017)
Software Authors: Jens Quedenfeld, Sven Rahmann
Related Software:
Main Fields: Biology and other natural sciences (92-XX)

BioWorkbench

Cited in 0 Documents
Software Authors: Maria Luiza Mondelli, Thiago Magalhães, Guilherme Loss, Michael Wilde, Ian Foster, Marta Mattoso, Daniel S. Katz, Helio J. C. Barbosa, Ana Tereza R. Vasconcelos, Kary Ocaña, Luiz M. R. Gadelha Jr
Related Software: Taverna; Docker; WEP; …
Main Fields:

BoolSi

Cited in 0 Documents
Software Authors: Vladyslav Oles; Anton Kukushkin
Related Software: BoolNet; PlantSimLab; Ginsim; …
Main Fields:

BrookGPU

Cited in 0 Documents
Software Authors: Ian Buck; Tim Foley; Daniel Horn; Jeremy Sugerman; Pat Hanrahan; Mike Houston; Kayvon Fatahalian
Related Software: Bison; GPU-ABiSort; Cg; …
Main Fields:

ConfocalGN

Cited in 0 Documents
Software Authors: Serge Dmitrieff, François Nédélec
Related Software: Huygens; SMeagol; BlurLab; …
Main Fields:

3D-hit

Cited in 1 Document (2014)
Software Authors: Bieniasz-Krzywiec, Ł.; Cytowski, M.; Rychlewski, L.; Plewczynski, D.
Related Software:
Main Fields: Biology and other natural sciences (92-XX)

DeepRT

Cited in 0 Documents
Software Authors: Chunwei Ma, Zhiyong Zhu, Jun Ye, Jiarui Yang, Jianguo Pei, Shaohang Xu, Chang Yu, Fan Mo, Bo Wen, Siqi Liu
Related Software:
Main Fields:

egforui

Cited in 0 Documents
Software Authors: Alona Gokhler; Kim Albertsson; Lucas Gallindo
Related Software:
Main Fields:

FPQRNA

Cited in 0 Documents
Software Authors: Xia, Fei; Dou, Yong; Lei, Guo-Qing
Related Software:
Main Fields:

Gerbil

Cited in 1 Document (2022)
Software Authors: Marius Erbert, Steffen Rechner, Matthias Müller-Hannemann
Related Software: Winnowing; Minimap2; Adam; …
Main Fields: Computer science (68-XX); Biology and other natural sciences (92-XX)

ImaGEO

Cited in 0 Documents
Software Authors: Daniel Toro-Domínguez, Jordi Martorell-Marugán, Raúl López-Dominguez, Adrián García-Moreno, Víctor González-Rumayor, Marta E Alarcón-Riquelme, Pedro Carmona-Sáez
Related Software: INMEX; ExAtlas; ScanGEO; …
Main Fields:

mCSEA

Cited in 0 Documents
Software Authors: Jordi Martorell-Marugán, Víctor González-Rumayor, Pedro Carmona-Sáez
Related Software: COHCAP; IMA; KEGG; …
Main Fields:

MetaGenyo

Cited in 0 Documents
Software Authors: Jordi Martorell-Marugan, Daniel Toro-Dominguez, Marta E. Alarcon-Riquelme, Pedro Carmona-Saez
Related Software: MIX; MetaEasy; SAS; …
Main Fields:

MolGraph

Cited in 0 Documents
Software Authors: Alexander Kensert, Gert Desmet, Deirdre Cabooter
Related Software: MolGAN; Retip; MoleculeNet; …
Main Fields:

MVR

Cited in 1 Document (2012)
Software Authors: Dazard, Jean-Eudes; Hua Xu; Alberto H Santana; J. Sunil Rao
Related Software: ElemStatLearn; vsn; sma; …
Main Fields: Statistics (62-XX); Numerical analysis (65-XX)

omicR

Cited in 0 Documents
Software Authors: Berenice Talamantes-Becerra, Jason Carling, Arthur Georges
Related Software: Biopython; SequenceServer; BlastGUI; …
Main Fields:

PGMiner

Cited in 0 Documents
Software Authors: Canan Has; Jens Allmer
Related Software: GeneScout; iPiG; KNIME; …
Main Fields:

phylogram

Cited in 0 Documents
Software Authors: Shaun Wilkinson, Simon Davy
Related Software: phangorn; phytools; ape; …
Main Fields:

phyphy

Cited in 0 Documents
Software Authors: Stephanie J. Spielman
Related Software: Datamonkey; HyPhy; Python
Main Fields:

Pynteny

Cited in 0 Documents
Software Authors: Semidán Robaina-Estévez; José M. González
Related Software: HMMER; Magic-BLAST; clinker; …
Main Fields:

Rightfield

Cited in 0 Documents
Software Authors: Wolstencroft, Katy; Owen, Stuart; Horridge, Matthew; Krebs, Olga; Mueller, Wolfgang; Snoep, Jacky L.; Du Preez, Franco; Goble, Carole A.
Related Software:
Main Fields:

SeqPanther

Cited in 0 Documents
Software Authors: James Emmanuel San, Stephanie van Wyk, Houriiyah Tegally, Simeon Eche, Eduan Wilkinson, Aquillah M. Kanzi, Tulio de Oliveira, Anmol M. Kiran
Related Software: SeqTools; BCFtools; Samtools; …
Main Fields:

SimSoup

Cited in 0 Documents
Software Authors: Chris Gordon-Smith
Related Software:
Main Fields:

WarpCore

Cited in 0 Documents
Software Authors: Daniel Jünger; Robin Kobus; André Müller; Christian Hundt, Kai Xu; Weiguo Liu; Bertil Schmidt
Related Software: MetaCache; SlabHash; HashGraph; …
Main Fields:

Geneious

Cited in 0 Documents
Software Authors: AJ Drummond, B Ashton, S Buxton, M Cheung
Related Software:
Main Fields:

gfit

Cited in 0 Documents
Software Authors: Mikhail K. Levin
Related Software:
Main Fields:

GRIDportal

Cited in 0 Documents
Software Authors: numerodix
Related Software:
Main Fields:

iCorr

Cited in 0 Documents
Software Authors: Shubham Kundal, Raunak Lohiya, Kushal Shah
Related Software:
Main Fields:

JFDraw

Cited in 0 Documents
Software Authors: CookieMaker
Related Software:
Main Fields:

jgram

Cited in 0 Documents
Software Authors: enkidu64
Related Software:
Main Fields:

Magic Garden

Cited in 0 Documents
Software Authors: Blacky_
Related Software:
Main Fields:

mcl-edge

Cited in 0 Documents
Software Authors: Stijn van Dongen
Related Software:
Main Fields:

openModeller

Cited in 0 Documents
Software Authors: Muñoz, M.E.S., Giovanni, R., Siqueira, M.F., Sutton, T., Brewer, P., Pereira, R.S., Canhos, D.A.L. & Canhos, V.P.
Related Software:
Main Fields:

Path2PPI

Cited in 0 Documents
Software Authors: Philipp, Oliver; Osiewacz, Heinz D.; Koch, Ina
Related Software:
Main Fields:

Phylotastic

Cited in 0 Documents
Software Authors: Hai Nguyen, Thanh; Pontelli, Enrico; Cao Son, Tran; Stoltzfus, A.
Related Software:
Main Fields:

Powua Client

Cited in 0 Documents
Software Authors: Solgenia
Related Software:
Main Fields:

PROMPT

Cited in 0 Documents
Software Authors: Schmidt, T.; Frishman, D
Related Software:
Main Fields:

SigmaPi Neurosimulator

Cited in 0 Documents
Software Authors: ewald72
Related Software:
Main Fields:

TIBS

Cited in 0 Documents
Software Authors: Yan, Jing; Xu, Yan; Hu, Brian; Alnajm, Sammy; Liu, Lina; Lu, Yin; Sun, Zhiguang; Cheng, Feng
Related Software:
Main Fields:

Filter Results by …

all top 5

Related Software

all top 3

Main Field