moveHMM Cited in 17 Documents (2016–2023) Software Authors: Michelot, Theo; Langrock, Roland; Patterson, Toby; Rexstad, Eric Related Software: R; momentuHMM; circular; … Main Fields: General and overarching topics; collections (00-XX); Probability theory and stochastic processes (60-XX); Statistics (62-XX); …
minepy Cited in 5 Documents (2016–2023) Software Authors: Albanese, D.; Filosi, M.; Visintainer, R. Related Software: minerva; R; Hmisc; … Main Fields: Statistics (62-XX); Operations research, mathematical programming (90-XX); Biology and other natural sciences (92-XX)
libRoadRunner Cited in 2 Documents (2017–2024) Software Authors: Somogyi, E. T. Related Software: COPASI; tellurium; Python; … Main Fields: General and overarching topics; collections (00-XX); Biology and other natural sciences (92-XX)
EoN Cited in 2 Documents (2017–2019) Software Authors: Miller, Joel C.; TIng, Tony Related Software: Python; EpiModel; Graph-tool; … Main Fields: General and overarching topics; collections (00-XX); Biology and other natural sciences (92-XX)
PEtab Cited in 1 Document (2020) Software Authors: Schmiester, Leonard; Schälte, Yannik; Bergmann, Frank T.; Camba, Tacio; Dudkin, Erika; Egert, Janine; Fröhlich, Fabian; Fuhrmann, Lara; Hauber, Adrian L.; Kemmer, Svenja; Lakrisenko, Polina; Loos, Carolin; Merkt, Simon; Müller, Wolfgang; Pathirana, Dilan; Raimúndez, Elba; Refisch, Lukas; Rosenblatt, Marcus; Stapor, Paul L.; Städter, Philipp; Wang, Dantong; Wieland, Franz-Georg; Banga, Julio R.; Timmer, Jens; Villaverde, Alejandro F.; Sahle, Sven; Kreutz, Clemens; Hasenauer, Jan; Weindl, Daniel Related Software: Data2Dynamics; pyPESTO; AMIGO; … Main Fields: Dynamical systems and ergodic theory (37-XX); Numerical analysis (65-XX)
adjclust Cited in 2 Documents (2021–2024) Software Authors: Ambroise, Christophe; Chaturvedi, Shubham; Dehman, Alia; Koskas, Michel; Neuvial, Pierre; Rigaill, Guillem; Vialaneix, Nathalie Related Software: CONISS; ClustGeo; Matrix; … Main Fields: Statistics (62-XX)
amt Cited in 0 Documents Software Authors: Signer, Johannes Related Software: moveHMM; R; trajr; … Main Fields: –
CplexA Cited in 2 Documents (2016–2019) Software Authors: Vilar, J. M. G.; Saiz, L. Related Software: Cellerator; STOCHSIM; Matlab; … Main Fields: Biology and other natural sciences (92-XX)
MomentClosure.jl Cited in 2 Documents (2022–2023) Software Authors: Sukys, Augustinas; Grima, Ramon Related Software: CERENA; SteadyCellPhenotype; SymPy; … Main Fields: Probability theory and stochastic processes (60-XX); Biology and other natural sciences (92-XX)
PyBioNetFit Cited in 1 Document (2020) Software Authors: Mitra, ED; Suderman, R.; Colvin, J.; Ionkov, A.; Hu, A.; Sauro, HM; Posner, RG; Hlavacek, WS Related Software: COPASI; AMIGO; tellurium; … Main Fields: Dynamical systems and ergodic theory (37-XX); Numerical analysis (65-XX)
PyRoss Cited in 2 Documents (2021–2023) Software Authors: Adhikari, R.; Bolitho, Austen; Caballero, Fernando; Cates, Michael E.; Dolezal, Jakub; Ekeh, Timothy; Guioth, Jules; Jack, Robert L.; Kappler, Julian; Kikuchi, Lukas; Kobayashi, Hideki; Li, Yuting I.; Peterson, Joseph D.; Pietzonka, Patrick; Remez, Benjamin; Rohrbach, Paul B.; Singh, Rajesh; Turk, Günther Related Software: JAX; Nestle; SciPy; … Main Fields: Ordinary differential equations (34-XX); Calculus of variations and optimal control; optimization (49-XX); Operations research, mathematical programming (90-XX); …
TrajectoryNet Cited in 2 Documents (2023–2024) Software Authors: Tong, Alexander; Huang, Jessie; Wolf, Guy; Dijk, David van; Krishnaswamy, Smita Related Software: Wasserstein GAN; PyTorch; nsf; … Main Fields: Calculus of variations and optimal control; optimization (49-XX); Probability theory and stochastic processes (60-XX); Statistics (62-XX); …
BioSimulator.jl Cited in 0 Documents Software Authors: Landeros, Alfonso; Stutz, Timothy; Keys, Kevin L.; Alekseyenko, Alexander; Sinsheimer, Janet S.; Lange, Kenneth; Sehl, Mary Related Software: DifferentialEquations.jl; Julia; DiffEqFlux; … Main Fields: –
CoMEt Cited in 0 Documents Software Authors: Leiserson, Mark D. M.; Wu, Hsin-Ta; Vandin, Fabio; Raphael, Benjamin J. Related Software: cometExactTest Main Fields: –
heatmaply Cited in 1 Document (2018) Software Authors: Galili, Tal Related Software: ggplot2; ComplexHeatmap; Superheat; … Main Fields: Statistics (62-XX)
ImJoy Cited in 0 Documents Software Authors: Ouyang, Wei; Mueller, Florian; Hjelmare, Martin; Lundberg, Emma; Zimmer, Christophe Related Software: ShuffleNet; Skin-Lesion-Analyzer; CDeep3M; … Main Fields: –
PyPhi Cited in 1 Document (2023) Software Authors: Mayner, William G. P.; Marshall, William; Albantakis, Larissa; Findlay, Graham; Marchman, Robert; Tononi, Giulio Related Software: Python; NumPy Main Fields: Operations research, mathematical programming (90-XX)
PySEAL Cited in 1 Document (2022) Software Authors: Titus, Alexander J.; Kishore, Shashwat; Stavish, Todd; Rogers, Stephanie M.; Ni, Karl Related Software: SEAL; Python; GitHub Main Fields: Information and communication theory, circuits (94-XX)
qqconf Cited in 1 Document (2023) Software Authors: Weine, Eric; McPeek, Mary Sara; Abney, Mark Related Software: SetTest; ExactKS2SidedOneSample; KS1SidedOneSample; … Main Fields: Statistics (62-XX)
SSNdesign Cited in 1 Document (2023) Software Authors: Pearse, Alan R.; McGree, James M.; Som, Nicholas A.; Leigh, Catherine; Hoef, Jay M. Ver; Maxwell, Paul; Peterson, Erin E. Related Software: SSN; geospt; spsurvey; … Main Fields: Statistics (62-XX)
aPCoA Cited in 0 Documents Software Authors: Shi, Yushu Related Software: mvabund; shiny; R Main Fields: –
BIDEAL Cited in 0 Documents Software Authors: Verma, Nishchal K.; Sharma, T.; Dixit, S.; Agrawal, P.; Sengupta, S.; Singh, V. Related Software: BiVisu; BicNET; EXPANDER; … Main Fields: –
cgmquantify Cited in 0 Documents Software Authors: Henriquez, Maria; Bent, Brinnae Related Software: CGManalyzer; cgmanalysis; Python; … Main Fields: –
DGL-LifeSci Cited in 0 Documents Software Authors: Li, Mufei; Zhou, Jinjing; Hu, Jiajing; Fan, Wenxuan; Zhang, Yangkang; Gu, Yaxin; Karypis, George Related Software: MoleculeNet; Chainer; ZINC; … Main Fields: –
DyPy Cited in 0 Documents Software Authors: Nande, Anjalika; Ferdowsian, Andrew; Lubin, Eric; Yoeli, Erez; Nowak, Martin Related Software: Python Main Fields: –
ezcox Cited in 0 Documents Software Authors: Wang, Shixiang Related Software: survival; R Main Fields: –
gibbonR Cited in 0 Documents Software Authors: Clink, Dena J.; Klinck, Holger Related Software: ggplot2; seewave; signal; … Main Fields: –
GuidedSparseKmeans Cited in 0 Documents Software Authors: Meng, Lingsong; Avram, Dorina; Tseng, George; Huo, Zhiguang Related Software: GitHub; R Main Fields: –
IntLIM Cited in 0 Documents Software Authors: Siddiqui, Jalal K.; Baskin, Elizabeth; Liu, Mingrui; Cantemir-Stone, Carmen Z.; Zhang, Bofei; Bonneville, Russell; McElroy, Joseph P.; Coombes, Kevin R.; Mathé, Ewy A. Related Software: plotly; Highcharter; shiny; … Main Fields: –
ModelFactory Cited in 0 Documents Software Authors: Sreenivasa, Manish; Harant, Monika Related Software: Puppeteer; Simox; Simbody; … Main Fields: –
MolGraph Cited in 0 Documents Software Authors: Kensert, Alexander; Desmet, Gert; Cabooter, Deirdre Related Software: MolGAN; Retip; MoleculeNet; … Main Fields: –
naplib-python Cited in 0 Documents Software Authors: Mischler, Gavin; Raghavan, Vinay; Keshishian, Menoua; Mesgarani, Nima Related Software: Eelbrain; MNE; mTRF; … Main Fields: –
ParameterEstimation.jl Cited in 0 Documents Software Authors: Go, Soo; Hong, Hoon; Ilmer, Ilia; Ovchinnikov, Alexey; Soto, Pedro; Yap, Chee Related Software: msolve; TaylorSeries.jl; sbtoolbox; … Main Fields: –
Pline Cited in 0 Documents Software Authors: Veidenberg, Andres; Löytynoja, Ari Related Software: Electron; PAML; Taverna; … Main Fields: –
PolyLinkR Cited in 0 Documents Software Authors: Tobler, Raymond; Johar, Angad; Huber, Christian; Souilmi, Yassine Related Software: KEGG; biomaRt; R Main Fields: –
Pyrcca Cited in 0 Documents Software Authors: Bilenko, Natalia Y.; Gallant, Jack L. Related Software: PyKCCA; Scikit; Python Main Fields: –
pyssam Cited in 0 Documents Software Authors: Williams, Josh; Ozel, Ali; Wolfram, Uwe Related Software: Statismo; ShapeWorks; Python Main Fields: –
r.jive Cited in 0 Documents Software Authors: O'Connell, Michael J.; Lock, Eric F. Related Software: sva; CRAN; R Main Fields: –
RNAglib Cited in 0 Documents Software Authors: Mallet, Vincent; Oliver, Carlos; Broadbent, Jonathan; Hamilton, William L.; Waldispühl, Jérôme Related Software: DGL; FR3D; PyTorch; … Main Fields: –
RNeXML Cited in 0 Documents Software Authors: Boettiger, Carl; Chamberlain, Scott; Vos, Rutger; Lapp, Hilmar Related Software: phytools; TreeBASE; GEIGER; … Main Fields: –
rolldown Cited in 0 Documents Software Authors: Rodríguez-Sánchez, Pablo; Nes, Egbert H. van; Scheffer, Marten Related Software: R Main Fields: –
SBML2Julia Cited in 0 Documents Software Authors: Lang, Paul F.; Shin, Sungho; Zavala, Victor M. Related Software: PEtab; pyPESTO; Data2Dynamics; … Main Fields: –
SBMLDiagrams Cited in 0 Documents Software Authors: Xu, Jin; Jiang, Jessie; Sauro, Herbert M. Related Software: libSBML; SimpleSBML; Python Main Fields: –
theft Cited in 0 Documents Software Authors: Henderson, Trent; Bryant, Annie Related Software: tidyverse; t-SNE; FFORMA; … Main Fields: –
WExT Cited in 0 Documents Software Authors: Leiserson, Mark D. M.; Reyna, Matthew A.; Raphael, Benjamin J. Related Software: minpack; SciPy Main Fields: –
wtest Cited in 0 Documents Software Authors: Sun, Rui; Chang, Billy; Zee, Benny Chung-Ying; Wang, Maggie Haitian Related Software: CRAN; R Main Fields: –
ICeShOT Cited in 0 Documents Software Authors: Diez, Antoine; Feydy, Jean Related Software: – Main Fields: –