moveHMM Software Authors: Theo Michelot, Roland Langrock, Toby Patterson, Eric Rexstad Cited in: 14 Publications (2016–2022) Related Software: R; momentuHMM; circular; ctmm; crawl; CircStats; … Main Fields: –
minepy Software Authors: Albanese, D., Filosi, M., Visintainer, R. Cited in: 4 Publications (2016–2020) Related Software: minerva; R; Hmisc; Matlab; Python; PhysioToolkit; … Main Fields: –
EoN Software Authors: Joel C. Miller, Tony TIng Cited in: 2 Publications (2017–2019) Related Software: Python; EpiModel; SciPy; Graph-tool; epydemic; R; … Main Fields: –
libRoadRunner Software Authors: Somogyi, E. T. et al. Cited in: 1 Publication (2017) Related Software: tellurium; Python; SUNDIALS; COPASI; SBW; LibSBMLSim; … Main Fields: –
PEtab Software Authors: Leonard Schmiester, Yannik Schälte, Frank T. Bergmann, Tacio Camba, Erika Dudkin, Janine Egert, Fabian Fröhlich, Lara Fuhrmann, Adrian L. Hauber, Svenja Kemmer, Polina Lakrisenko, Carolin Loos, Simon Merkt, Wolfgang Müller, Dilan Pathirana, Elba Raimúndez, Lukas Refisch, Marcus Rosenblatt, Paul L. Stapor, Philipp Städter, Dantong Wang, Franz-Georg Wieland, Julio R. Banga, Jens Timmer, Alejandro F. Villaverde, Sven Sahle, Clemens Kreutz, Jan Hasenauer, Daniel Weindl Cited in: 1 Publication (2020) Related Software: Data2Dynamics; COPASI; AMIGO; pyPESTO; Antimony; Python; … Main Fields: –
CplexA Software Authors: J. M. G. Vilar, L. Saiz Cited in: 2 Publications (2016–2019) Related Software: Cellerator; STOCHSIM; Matlab; Python; Mathematica; RegulonDB Main Fields: –
PyBioNetFit Software Authors: Mitra, ED; Suderman, R.; Colvin, J.; Ionkov, A.; Hu, A.; Sauro, HM; Posner, RG; Hlavacek, WS Cited in: 1 Publication (2020) Related Software: COPASI; AMIGO; tellurium; MEIGO; BioNetGen; Data2Dynamics; … Main Fields: –
adjclust Software Authors: Christophe Ambroise, Shubham Chaturvedi, Alia Dehman, Michel Koskas, Pierre Neuvial, Guillem Rigaill, Nathalie Vialaneix Cited in: 1 Publication (2021) Related Software: CONISS; ClustGeo; capushe; Matrix; HiTC; snpStats; … Main Fields: –
amt Software Authors: Johannes Signer Cited in: 0 Publications Related Software: ctmm; R; moveHMM; kftrack; ukfsst; kfsst; … Main Fields: –
BioSimulator.jl Software Authors: Alfonso Landeros, Timothy Stutz, Kevin L. Keys, Alexander Alekseyenko, Janet S. Sinsheimer, Kenneth Lange, Mary Sehl Cited in: 0 Publications Related Software: DifferentialEquations.jl; Julia; DiffEqFlux; Flux; GR Framework; epinet; … Main Fields: –
CoMEt Software Authors: Mark D.M. Leiserson, Hsin-Ta Wu, Fabio Vandin, Benjamin J. Raphael Cited in: 0 Publications Related Software: cometExactTest Main Fields: –
heatmaply Software Authors: Tal Galili Cited in: 1 Publication (2018) Related Software: ggplot2; ComplexHeatmap; Superheat; pheatmap; R; shiny; … Main Fields: –
PyRoss Software Authors: R. Adhikari, Austen Bolitho, Fernando Caballero, Michael E. Cates, Jakub Dolezal, Timothy Ekeh, Jules Guioth, Robert L. Jack, Julian Kappler, Lukas Kikuchi, Hideki Kobayashi, Yuting I. Li, Joseph D. Peterson, Patrick Pietzonka, Benjamin Remez, Paul B. Rohrbach, Rajesh Singh, Günther Turk Cited in: 1 Publication (2021) Related Software: JAX; Nestle; SciPy; Odespy; Autograd; NumPy; … Main Fields: –
aPCoA Software Authors: Yushu Shi Cited in: 0 Publications Related Software: mvabund; shiny; R Main Fields: –
BIDEAL Software Authors: Nishchal K. Verma, T. Sharma, S. Dixit, P. Agrawal, S. Sengupta, V. Singh Cited in: 0 Publications Related Software: BiVisu; BicNET; EXPANDER; BicOverlapper; FABIA; bibench; … Main Fields: –
cgmquantify Software Authors: Maria Henriquez; Brinnae Bent Cited in: 0 Publications Related Software: CGManalyzer; cgmanalysis; Python; R Main Fields: –
DGL-LifeSci Software Authors: Mufei Li, Jinjing Zhou, Jiajing Hu, Wenxuan Fan, Yangkang Zhang, Yaxin Gu, George Karypis Cited in: 0 Publications Related Software: MoleculeNet; Chainer; ZINC; PiNN; Chainer Chemistry; DeepChem; … Main Fields: –
DyPy Software Authors: Anjalika Nande, Andrew Ferdowsian, Eric Lubin, Erez Yoeli, Martin Nowak Cited in: 0 Publications Related Software: Python Main Fields: –
ezcox Software Authors: Shixiang Wang Cited in: 0 Publications Related Software: survival; R Main Fields: –
gibbonR Software Authors: Dena J. Clink, Holger Klinck Cited in: 0 Publications Related Software: ggplot2; seewave; signal; gstat; e1071; tuneR; … Main Fields: –
GuidedSparseKmeans Software Authors: Lingsong Meng, Dorina Avram, George Tseng, Zhiguang Huo Cited in: 0 Publications Related Software: GitHub; R Main Fields: –
IntLIM Software Authors: Jalal K. Siddiqui, Elizabeth Baskin, Mingrui Liu, Carmen Z. Cantemir-Stone, Bofei Zhang, Russell Bonneville, Joseph P. McElroy, Kevin R. Coombes, Ewy A. Mathé Cited in: 0 Publications Related Software: plotly; Highcharter; shiny; OOMPA; hgu133plus2.db; HMDB; … Main Fields: –
ModelFactory Software Authors: Manish Sreenivasa; Monika Harant Cited in: 0 Publications Related Software: Puppeteer; Simox; Simbody; RBDL; Matlab; Octave; … Main Fields: –
MolGraph Software Authors: Alexander Kensert, Gert Desmet, Deirdre Cabooter Cited in: 0 Publications Related Software: MolGAN; Retip; MoleculeNet; PyTorch; DGL; Keras; … Main Fields: –
MomentClosure.jl Software Authors: Augustinas Sukys, Ramon Grima Cited in: 0 Publications Related Software: Catalyst.jl; MEANS; CERENA; ModelingToolkit.jl; Compartor; DifferentialEquations.jl; … Main Fields: –
Pline Software Authors: Andres Veidenberg, Ari Löytynoja Cited in: 0 Publications Related Software: Electron; PAML; Taverna; Wasabi; UGENE; Samtools; … Main Fields: –
PolyLinkR Software Authors: Raymond Tobler, Angad Johar, Christian Huber, Yassine Souilmi Cited in: 0 Publications Related Software: KEGG; biomaRt; R Main Fields: –
PyPhi Software Authors: William G. P. Mayner; William Marshall; Larissa Albantakis; Graham Findlay; Robert Marchman; Giulio Tononi Cited in: 0 Publications Related Software: Python; NumPy Main Fields: –
Pyrcca Software Authors: Natalia Y. Bilenko, Jack L. Gallant Cited in: 0 Publications Related Software: PyKCCA; Scikit; Python Main Fields: –
PySEAL Software Authors: Alexander J. Titus, Shashwat Kishore, Todd Stavish, Stephanie M. Rogers, Karl Ni Cited in: 0 Publications Related Software: GitHub; Python; SEAL Main Fields: –
pyssam Software Authors: Josh Williams, Ali Ozel, Uwe Wolfram Cited in: 0 Publications Related Software: Statismo; ShapeWorks; Python Main Fields: –
qqconf Software Authors: Eric Weine, Mary Sara McPeek, Mark Abney Cited in: 0 Publications Related Software: qqplotr; R Main Fields: –
r.jive Software Authors: Michael J. O'Connell; Eric F. Lock Cited in: 0 Publications Related Software: R; sva; CRAN Main Fields: –
RNAglib Software Authors: Vincent Mallet, Carlos Oliver, Jonathan Broadbent, William L. Hamilton, Jérôme Waldispühl Cited in: 0 Publications Related Software: DGL; FR3D; PyTorch; VeRNAl; 3DNA; RNAMotifContrast; … Main Fields: –
RNeXML Software Authors: Carl Boettiger, Scott Chamberlain, Rutger Vos, Hilmar Lapp Cited in: 0 Publications Related Software: phytools; TreeBASE; GEIGER; ape; phylobase; XML; … Main Fields: –
rolldown Software Authors: Pablo Rodríguez-Sánchez, Egbert H. van Nes, Marten Scheffer Cited in: 0 Publications Related Software: R Main Fields: –
SBML2Julia Software Authors: Paul F. Lang, Sungho Shin, Victor M. Zavala Cited in: 0 Publications Related Software: PEtab; pyPESTO; Data2Dynamics; HSL; JuMP; AMIGO; … Main Fields: –
SBMLDiagrams Software Authors: Jin Xu, Jessie Jiang, Herbert M. Sauro Cited in: 0 Publications Related Software: libSBML; SimpleSBML; Python Main Fields: –
SSNdesign Software Authors: Alan R. Pearse, James M. McGree, Nicholas A. Som, Catherine Leigh, Jay M. Ver Hoef, Paul Maxwell, Erin E. Peterson Cited in: 0 Publications Related Software: SSN; geospt; spsurvey; acebayes; R Main Fields: –
theft Software Authors: Trent Henderson, Annie Bryant Cited in: 0 Publications Related Software: tidyverse; t-SNE; FFORMA; Rcatch22; tsfresh; TSFEL; … Main Fields: –
WExT Software Authors: Mark D.M. Leiserson, Matthew A. Reyna, Benjamin J. Raphael Cited in: 0 Publications Related Software: minpack; SciPy Main Fields: –
wtest Software Authors: Rui Sun, Billy Chang, Benny Chung-Ying Zee, Maggie Haitian Wang Cited in: 0 Publications Related Software: CRAN; R Main Fields: –